Supplemental Materials Temperature Shift Effect on the Chlorobaculum tepidum Chlorosomes Joseph Kuo-Hsiang Tang1,*, Xing Xu2, Guillermo M. Muhlmann1, Farrokh Zare1, Yadana Khin1, Sun W. Tam1,2 1 School of Chemistry and Biochemistry, Clark University, Worcester, MA 01610, USA, and 2 Nuclea Biotechnologies Inc., Pittsfield, MA 01201, USA Running title: Temperature shift on chlorosomes *To whom correspondence should be addressed: Tel: 1-614-316-7886, Fax: 1-508-793-8861, Email: jtang@clarku.edu 1 Fig. S1. Growth curves and absorption spectra of constant temperature and temperature shift cultures measured at different temperatures. The absorption spectra of constant temperature cultures at 50 oC (A) and cultures down-shifted to 30 oC (B), and culture growth curves for constant temperature cultures at 50 oC and cultures down-shifted to 30 oC (C) and constant temperature cultures at 30 oC and cultures up-shifted to 50 oC (D) are shown. A B 1.8 2 1.6 o 1.8 25 oC o 1.6 30 oC 1.4 40 C 1.2 50 oC 25 C 1.4 40 C o 50 C Abs. Abs. 1.2 1 0.8 1 0.6 0.8 0.4 0.6 0.4 0.2 400 500 600 700 800 o 400 500 600 700 800 Wavelength (nm) Wavelength (nm) C D 3 Cultures down-shifted 3.5 Constant temperature to 30 oC 3 Constant temperature Cultures up-shifted to OD 625 625 cultures at 50 oC 2.5 OD cultures at 30 oC 2.5 2 50 oC 2 1.5 1.5 1 1 0.5 0.5 0 0 0 10 20 30 40 50 60 70 0 10 20 30 40 Time (hr) Time (hr) 2 50 60 70 Fig. S2. Absorption spectra of chlorosomes with versus without DTT addition. The absorption spectra of chlorosomes from constant temperature cultures at 50 oC (A) and from cultures down-shifted from 50 oC to 30 oC (B) with versus without 100 mM DTT are shown. The chlorosomes samples without versus with DTT are noted as “aerobic” and “reduced” samples, respectively. A B 0.08 0.08 Aerobic Aerobic Reduced 0.06 Abs. 0.04 0.04 0.02 0.02 0 400 Reduced Abs. 0.06 500 600 700 0 400 800 500 600 700 Wavelength (nm) Wavelength (nm) 3 800 Fig. S3. Absorption (A) and CD spectra (B) of intact chlorosomes, BChl c monomers and aggregates. BChl c monomers were acquired through methanol extraction of chlorosomes. A B 40 2 Intact chlorosomes BChl c monomer 670 nm Abs. BChl c monomers BChl c aggregates 30 CD (mdegree) 1.5 748 nm 1 20 10 0 -10 0.5 -20 0 400 -30 480 560 640 720 800 400 880 Wavelength (nm) 500 600 700 wavelength (nm) 4 800 Fig. S4. CD spectra of chlorosomes and BChl c aggregates form various cultural conditions. The CD spectra of chlorosomes and BChl c aggregates from constant temperature cultures at 50 o C (A) and from cultures down-shifted to 30 oC (B), concentration series measurements for chlorosomes from constant temperature cultures at 50 oC (C), cultures down-shifted to 30 oC (D), BChl c aggregates from constant temperature cultures at 50 oC (E) and BChl c aggregates from cultures down-shifted to 30 oC (F) are shown. A B 100 100 Chlorosomes Chlorosomes BChl c aggregates BChl c aggregates 50 CD (mdeg) CD (mdeg) 50 0 -50 -50 -100 0 400 500 600 700 -100 800 400 Wavelength (nm) 500 600 700 800 Wavelength (nm) C D 40 no dilution dilute 1.5-fold dilute 3-fold dilute 6-fold dilute 12-fold 20 10 40 CD (mdeg) CD (mdeg) 30 0 -10 -20 no dilution 2-fold dilution 4-fold dilution 8-fold dilution 16-fold dilution 20 0 -20 -30 -40 -40 400 500 600 700 400 800 Wavelength (nm) 500 600 700 800 Wavelength (nm) E F 40 20 32 CD (mdeg) 16 CD (mdeg) no dilution dilute x 2-fold dilute x 4-fold dilute x 8-fold 24 8 0 -8 16 No dilution 12 dilute x 2-fold dilute x 4-fold 8 4 0 -4 -16 -8 -24 400 500 600 700 -12 800 Wavelength (nm) 400 500 600 700 Wavelength (nm) 5 800 Fig. S5. HPLC chromatograms in LC/MS analyses. The HPLC chromatographs monitoring at 640 nm for the pigments extracted from chlorosomes from constant temperature cultures at 50 oC (upper panel) and from cultures down-shifted from 50 oC to 30 oC (lower panel). Injection volume was 5 μL per sample. Elution/acquisition time for peaks 1, 2, 3, 4, 5 and 6 is 4.9, 5.3, 5.7, 6.2, 6.7 and 7.2 (min), respectively. 2 Chlorosomes from constant temperature cultures at 50 oC 3 1 4 2 Chlorosomes from cultures down-shifted to 30 oC 5 6 3 1 4 5 Acquisition time (min) 6 6 Fig. S6. MS/MS spectra of bacteriochlorophyll c isolated from the Cba. tepdium chlorosomes. The data for m/z 793.5 (A), 807.5 (B), 823.5 (C), 839.5 (D) and 853.5 (E) are shown. A 793.5 MS/MS data for m/z 793.5 589.2 B 603.3 MS/MS data for m/z 807.5 807.5 7 C 619.3 MS/MS data for m/z 823.5 823.5 D MS/MS data for m/z 839.5 635.3 839.5 8 E 649.3 MS/MS data for m/z 853.5 853.5 9 Fig. S7. CD spectra of aerobic chlorosomes and buffer at different temperatures. CD spectra of buffer (20 mM Tris-HCl at pH 7.8) at 25, 45, 65 and 85 C (A), chlorosomes from constant temperature cultures at 50 oC incubating at 85 oC versus cooling to 25 oC from 85 oC (B). o A B 20 15 30 Buffer 85 oC o 45 C 25 C o 65 C o 20 85 C CD (mdeg) CD (mdeg) 10 o 5 0 -5 85 oC --> 25 oC 10 0 -10 -10 -15 -20 -20 400 500 600 700 800 400 Wavelength (nm) 500 600 700 Wavelength (nm) 10 800