Supporting materials SI Theoretical backgrounds S.I.1 Symmetry breaking and its recovery via quantum resonance and valence-bond CI model via LMO in diradicals The orbital symmetry breaking in the independent particle models such as the Hartree–Fock (HF) model arises from the strong electron correlation effect. Moreover, the symmetry breaking in the model entails the concept of quantum resonance that recovers the broken symmetry in finite systems. The resonance concept is familiar in quantum chemistry in relation to the valence-bond (VB) theory; to this end the delocalized molecular orbital (MO) picture can be transformed into localized MO (LMO) picture for the VB explanation of diradical species. The BS MOs in eqs. 2 in the text are indeed re-expressed with LMO (LNO)s in eq. 5 in the text as follows i cos LMOa + sin LMOb (s1a) cos LMOb +sin LMOa , (s1b) – i where the mixing parameter is given by 4 . configuration can be expanded with using LMOs as BSI i i cos LMOa +sin LMOb cos LMOb +sin LMOa 1 2 cos2SD 2TD sin2ZWa ZWb , 2 (s2a) (s2b) where the pure singlet diradical (SD) and triplet diradical (TD) covalent terms are given by (s3a) (s3b) SD 1 LMOa LMOb LMOb LMOa 2 TD 1 LMOa LMOb LMOb LMOa . 2 On the other hand, zwitterionic (ZW) configurations result from the charge transfer from LMOa to LMOb (vice versa) as follows: ZWa LMOa LMOa , ZWb LMOb LMOb . Therefore the BS MO (s4) The low-spin (LS) BSI MO configuration involves the pure triplet covalent term, showing the spin-symmetry breaking property. Similarly, the LS BSII MO configuration is expressed by BSII i– i (s5) 1 2 cos2SD 2TD sin2ZWa ZWb . 2 The LS BSII MO solution also involves the pure triplet term. Thus the spin symmetry breaking is inevitable in the case of the single-determinant (reference) BS solution for diradical species. However, both orbital and spin symmetries are conserved in finite quantum systems [24]; for example, the error arising from the triplet term in eq. s2 (s5) is easily eliminated by the AP procedure that eliminate the pure triplet term in eq. s2(s5). As shown in eqs. (s2) and (s5), the BSI and BSII solutions are degenerate in energy. Then the quantum resonance of them is permitted as follows [24]: RBS(+) RBS(–) 1 BSI BSII 2 (s6a) 1 2 cos2SD sin2ZWa ZWb , 2 (s6b) 1 BSI BSII 2 (s7a) TD. (s8b) where the normalizing factor is neglected for simplicity. Thus the in(+)- and out-of-phase(-) resonating BS (RBS) solutions are nothing but the pure singlet and triplet states wave functions, respectively; the broken-symmetries are recovered via the quantum resonance. The chemical bonding between a and b sites is expressed with the mixing of the SD and ZW terms under the LMO approximation. The VB type explanation of electronic structures becomes feasible under the LMO approximation [24]. For example, the effective bond order becomes zero for the pure covalent term, but it increases with the increase of mixing with the ZW term until the ZW/SD ratio becomes 1.0, namely closed-shell limit. Therefore the diradical character defined with the weight of the covalent term in the LMO description in the VB approach is in turn quite different from our definition of the diradical character based on the delocalized NO (DNO) model [24]. The VB-type descriptions and explanations of unstable molecules are obtained using the LMO in our approach. Here LMO(LNO) is utilized as reference orbitals for MkMRCC in relation to elimination of the size-consistent error [104, 105]. The mutual transformation from the localized MO picture to the conventional delocalized MO picture is easy because of the mathematical relations in eqs. 2, 5 and 6 in the text. In order to obtain the effective bond order for the pure singlet RBS(+) solution, it is transformed into the symmetry-adapted NO expression as 1 cos2 1 cos2 , 2(1 T ) 1 RBS(+) i 2 i * i * i (s9a) i where Ti is the orbital overlap between the up- and down-spin orbitals in eq. s1, and the first and second terms denote the ground and doubly excited configurations, respectively. In the text, the notation Si is utilized for Ti to avoid the confusion of notations. The effective bond order (B) for RBS( ) is given by B n i RBS () n *i RBS () 2 1 T 1 T 21 T 2 2 i i 2 i (s10a) 2Ti 1 Ti2 2bi bi . 1 bi2 (s10c) The B value, namely the elimination of the triplet state, is larger than b. (s10b) The diradical character (y) is defined by twice of the weight of the doubly excited configuration (WD) under the delocalized NO approximation as 1 T 2 y 2W D i 1 Ti 1 B. 2 1 2Ti 1 Ti2 (s11) (s12) Thus the diradical character y (=Y by the MR approach such as MkCC) is directly related to the decrease of the effective bond order B. The chemical indices, b, B, and y(=Y), are mutually related in the present BS MO approach; in fact, these are key conceptual bridges for MR CI, MkCC, BS UHF(UB) and BS DFT approaches in the present paper. These indices are also useful for elucidation of scope and applicability of the computational schemes of the effective exchange integrals (J) in eq. 8 in the text. SI.2 MRCC methods as direct extension of BS methods for quasi-degenerated electronic systems The theoretical description of diradicals is closely related to the strong electron correlation problem that has been investigated during past decades. In late 1960s and early 1970s the extended Hückel MO and conventional restricted HF (RHF) methods had been applied to the elucidation of concerted reactions predicted on the basis of the orbital-symmetry conservation rules proposed by Woodward and Hoffmann; the electronic structures of key transition structures in these reactions had been assumed to be nonradical in nature, namely in weak correlation regime. On the other hand, in 1970s, we had been concerned with theoretical studies on strongly correlated electron systems that were interesting targets for many body theories developed in late 1950 and 1960s as shown in many references (s1-s27). The instability of closed-shell RHF solutions had been investigated in relation to more stable BS HF solutions that are chemically related to the instability of chemical bonds (namely broken-chemical bonds)in diradical species and their clusters. Particularly, as shown in the text, we were interested in BS unrestricted HF (UHF) and unrestricted HF-Slater (UHFS) models by the use of different-orbitals-for-different spins (DODS) and more generalized HF (GHF) and generalized HFS (GHFS) based on the general spin orbitals (GSO); two component spinors, that arise from the static electron and spin correlations. In late 1970s the extension and refinement of these independent models (namely post RHF, UHF and GHF models) have been our interesting theoretical problem. To this end, we have performed the natural orbital (NO) analysis of these BS solutions to obtain the natural orbitals and their occupation numbers as shown in the supporting Fig. S1. The NO analysis has indeed elucidated active orbitals that are closely related to nondynamical correlation corrections; partitioning active orbitals have entailed the necessity of the genuine MR approach in strongly correlated electron systems. Therefore we considered that the MRCI and MRCC schemes are the most natural extensions of the BS methods, namely independent particle model, because the reference MR space can be constructed so as to describe quasi-degenerated electronic systems related to the BS solutions. We presented our MRCC scheme at Sanibel 1980 (ref. 23) on the basis of the MRCC by Offermann in nuclear physics, Mukherjee and Sinanoglu in quantum chemistry; a lot of reference papers on the CC methods are cited in the text for understanding of historical developments. Roos also proposed CASSCF at the same Sanibel conference. For the natural extension of the BS computations, the active space is limited so as to include nondynamical (static) correlations that are origins of instabilities in the RHF solution. Under this approximation, only the minimum reaction NO (MinRNO) = principal active space (PAS), namely CAS in our definition in Fig. 1 in the text, was considered instead of the maximum RNO (MaxRNO) = PAS+SAS (secondary active space). Therefore the reference function in MinRNO was taken to be UNO(=UHF-NO) and GNO(=GHF-NO) CASCI in our MR CI and MR CC schemes. On the other hand, Max RNO is often necessary for CASPT2 and related PT theories to include the higher-order excitations. The CC excitation operator was considered for the reference state to obtain the UNO(GNO) CASCC as CAS (MR CC) = exp (T) | YNO CASCI > (Y=U, G or D). (s13) where T = Ti (i=1-4). Before Jeziorski and Monkhorst [29] proposed their CC scheme in 1981, the uniform excitation operator formalism had been employed in the MRCC approach. If we consider only the one-electron excitation operator responsible for semi-internal correlation for full NO space, UNO (GNO) CASCCS is refined to UNO(GNO) CASSCF after the convergence of the CC equation because of the Thouless theorem (ref. s13). (CASSCF) = exp (T1) | YNO CASCI > (Y=U, G or D). (s14) However, the inclusion of the double excitation operator (D) in UNO (GNO) CASCCS is crucial for dynamical correlation correction, namely UNO(GNO) CASCCSD, as CAS(MR CCSD) = exp (T1 + T2) | YNO CASCI > (Y=U, G or D). (s15) The UNO(GNO) CASCCSD approach starting from UNO(GNO) CASCI was our chemical picture at that time. However, in the next year (1981), Jeziorski and Monkhorst in ref. 29 in the text proposed a more general state universal (SU) MR CC scheme; excitation operator is used for each configuration this scheme as shown below. The SU MRCC scheme is furthermore specified into the state specific (SS) MRCC version: which is now employed by several groups; in fact, it is developed by Mukherjee, Kalláy, Paldus, Evangelists, developers of PSIMRCC program (Crawford et al) and many research groups cited in references. However, the extension of the SS MRCC scheme to quasi-degenerated systems with large CAS space is still difficult. Therefore, several MRCC schemes have indeed been presented as shown in many references in refs. s1-s76. For example, more detailed formulation of the CASCC-type scheme can be obtained by eliminating redundant excitations with the Feynmandiagram techniques developed by Adamowicz at al. in refs. s69 and s73. For the purpose, Adamowicz et al. have divided the CC excitation operators into the internal (Tint) and external (Text) types like the Silberstone-Oktuz-Sinanoglu classification in refs. S21 and s22 CAS(CASCC) = exp (Text) exp (Tint) | 0 > (s16a) = exp (Text) ( 1 + Ci (i=1-n) )| 0 > where |0> is taken as the most doubly occupied determinant. (s16b) If active m-orbitals n-electrons are used for CAS, CASCCSD is constructed by using both Tint and Text excitation operators as CAS(CASCC) = exp (Ti (i=1-(n+2)) ( 1 + Ci (i=1-n) )| 0 > (s17) This CC scheme is therefore employed as a direct extension of MRSDCI. The total excitation operators are described with the pure external and mixed (Tint x Text) excitations in their scheme. The derivations of the MRCC equations and calculated results are given in several papers by Adamowizc (ref. s69). Judging from the numerical results for diradical species such as monocentric diradical (I), antiaromatic molecules (II) and 1,3-diradicals (III), SR CCSDTQ and MRCCSD provide similar results. This implies that the truncation of the excitation operators is possible at the SD level if the MR part in eq. s17 has been appropriately selected. However, SR CCSDTQ is indeed necessary for complex diradical as shown in the text. Our selection of the MR part is one of such reasonable procedures starting from the BS calculations for quasi-degenerated systems. As mentioned above, Jeziorski and Monkhorst [s27] have developed more general state universal (SU) MR CC scheme on the basis of the Bloch wave-operator technique. Their MR CC scheme is given by a simple formula (SU MR CC) = Cim (i=1-n)exp (Tim) im . (s18) As is apparent from this equation, the CC excitation operator is applied to each configuration involved in the MR zero-order function as mentioned above. In fact, the CI coefficient Ci and amplitude in the excitation operators Ti are determined in an iterative manner. This in turn means that the CASSCF part may be skipped if the reference orbitals are appropriately determined. For example, UNO CAS CI can be used for the purpose. Therefore diradical character can be also defined even in this SU MRCC scheme. However, expansion of CAS (RNO) space for polyradicals (IV) is not so easy in this scheme because of too many amplitude equations, though UHF-CC is easily applicable to them. Past decades several groups cited in references in the text have performed further derivations of the MRCC schemes as shown in refs. s40-s76. Now, the MRCC approach is classified into (a) state-universal (SU) or Hilbert space type, (b) valence-universal (VU) or Fock space type and (c) state-specific (SS) type. The delocalized UNO (UHF-NO) (GNO=GHF-NO) can be used for reference orbitals of these CC schemes. The size-inconsistent errors however are not negligible in the case of Mk-type UNO-MRCC (SS) approach, leading to use of the localized UNO (ULO) (see eq. 5 in the text) for elimination of such errors; ULO has been introduced to obtain the VB CI like pictures of the ground and excited states of diradical species; Yamaguchi K, Fueno T (1977) Chem Phys 23:375. In fact, ULO-MRCC provided reasonable potential curves of F2, CH2 and others as shown in this supporting material. Fig. S1 Computational schemes proposed in the paper: K. Yamaguchi, Int. J. Quant. Chem. S14, 269 (1980). The Brueckner double (BD) method often applied to polyenic diradicals with moderate spin polarization effects. The BD results are approximately reproduced with those of hybrid DFT. The hybrid DFT natural orbitals can be used as an alternative to the UBD natural orbitals, giving the delocalized DFT-NO (DNO) and localized DFT-LNO (DLO) MRCC (SS) as shown. The excitation energies of these systems can be calculated by the linear response (LR), equation of motion (EOM) or time-dependent energy derivative (TDEG) (which has been called as the quasi energy derivative (QED)) method for MRCC if correlation effects involved in the ground state are not drastically changed upon electronic excitations. 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This in turn provides a theoretical background for approximate spin projection scheme for the BS UHF-CCSD and UBD solutions. Therefore the Mukherjee’s type MRCC (MkCC) theories are briefly described for the present purpose: namely spin correction to the BS methods. In the Hilbert space MRCC, a model space M 0 ; 1, ,d containing d determinants is defined to construct a projection operator to M0 , P , d (s19) 1 and to its orthogonal space M 0 , Q q q . (s20) q M 0 While P projects the exact eigenstates wave functions in the P P P , of the Schrödinger’s equation to the M0 , (s21) one canin turn define the inversion of P in order to obtain the exact solution, as where P , (s21) is a wave operator. Eq. (s20), and the Schrödinger’s equation ( H E ) yields an effective eigen-value problem, (s22) H eff P E P , eff where H ( P H ) is a non-Hermitian effective Hamiltonian and E is the corresponding -th eigen value. Now, an intermediate normalization for , (s23) is assumed. Projecting eq. (s21) to the model space M0 yields a matrix representation of the effective eigenproblem, as d (s24) Heff c E c , =1 where eff H H eff (s25) and d P c . (s26) =1 In Hilbert space coupled-cluster theory, the wave operator is approximated as d eT , (s27) =1 to describe the exact wave functions as d c eT , (s28) =1 where T is an excitation operator from a related Fermi vacuum , which is similar to that of the single-reference CC method. However, all SU MRCC approaches require a separate cluster operator to each reference configuration; this entails a lot of cluster amplitude equations that are origins of heavy calculations when the CAS space (namely d in eq. s19) is larger than [2,2]. Therefore many approaches have been proposed for good convergence and reduction of computational cost. In the MkCC, the above SU Hilbert space is reduced to a state specific (SS) formalism through an amplitude equation to determine the T , q () e T He q () e T T c eff eT H c , In eq. (s29), a q () is an element in Q . (s29) This amplitude equation (s29) holds only for the -th state, is usually written 0. Containing only connected terms in eq. (s29) and eq. (s26) with a complete model space causes the size-extensiveness of MkCC. work, excitation operators In this T were limited to singles (S) and doubles (D). Natural molecular orbitals used in MkCC calculations were obtained by four methods: (i) CASSCF calculations (CNO), (ii) ROHF calculations (RNO) of high-spin states, (iii) BS calculations (UNO) of low-spin states and (iv) hybrid UDFT calculations (DNO) of low-spin states. The corresponding localized NO (LNO) are also examined concerned with the size-consistency as mentioned above. The MkCC for diradical systems is based on the 4-reference configuration model space that corresponds to the 2-electron 2-orbital complete active space [2,2] has been applied to MkCCSD calculations of diradicals species without particular mentions as c1 exp(T1) (core) 2 (inactive ) 2 x x c 2 exp(T2 ) (core) 2 (inactive ) 2 y y c 3 exp(T3 ) (core) 2 (inactive ) 2 x y c 4 exp(T4 ) (core) 2 (inactive ) 2 y x , (s30) where c1 ~ c4 and T1 ~ T4 were same as eq. (s30), (core) 2 was frozen-core orbitals, (inactive )2 was inactive occupied (cores) orbitals, x and y were two active orbitals that are taken to be BS natural orbitals (CNO, RNO, UNO and BNO) and CASSCF-NO. Although we do not use symmetry restrictions, eq. s30 reduces to 2-reference ) (core)2 (inactive )2 y y (s31) c exp(T ) (core)2 (inactive )2 x x c exp(T 1 1 2 2 for singlet diradical states as in the case of eq. s31. Therefore the diradical character (y) in eq. 15 can be easily defined using the coefficient c2 even in the MkCC approach; however, appropriate orbital rotation to quench singlet excited wavefunction is often necessary for RHF(ROHF)-NO. For calculations of triplet states, MkCCSD wave functions (Sz = 0) are expressed as 1 exp(T3 ) (core) 2 (inactive ) 2 x y exp(T4 ) (core) 2 (inactive ) 2 y x . (s32) 2 The localization of active orbitals was also performed to correct size-consistent errors, and the related MkCCSD wave function was c1 exp(T1) (core) 2 (inactive ) 2 u u c 2 exp(T2 ) (core) 2 (inactive ) 2 v v c 3 exp(T3 ) (core) 2 (inactive ) 2 uv c 4 exp(T4 ) (core) 2 (inactive ) 2 v u , (s33) where u and v were (s34) u x y / 2 , v x y / 2 respectively. Here, eq. 34 is taken to be eq. 5. When UNO is used as shown in section II, we can substitute total density of UHF for averaged Fock operator (which is RHF type Fock operator), and diagonalize the block of occupied orbitals except two active orbitals to extract frozen and inactive core orbitals. This pre-adjustment of UNO was similar to construct zero-th order Hamiltonian of CASPT2. This means that the UNO(DNO) CASCI wave functions can be used to express the trial model space for the CC procedure ; the full-optimization of CI coefficients with the CASSCF procedure is often skipped because the coefficients are relaxed under the iterative CC processes. E ALS eTBS BS ALS e TLS(prj) BS eTHS HS (1) ( 2) 1 C1 eTMR 1 1 C2 eTMR 22 2 S2 LS AHS eTBS BS eTBS BS BS Fig. S2 The projected CC approach to BS CC method S2 HS As shown in the text, CI matrix and amplitude equations are solved in the case of the true projected UHF-CCSD scheme. However, instead of these procedures, we here employ the simple approximated spin projection scheme for energy corrections of the UHF-CCSD and UBD solutions. In the present paper, the MkCCSD method has been used for elucidation of scope and applicability of the spin projection AP scheme as discussed in the text. Figure S2 illustrates the spin-projection scheme in the UHF-CCSD scheme that provides the LS and HS states after spin projection (see also the text). SI.4 Local spins and spin Hamiltonian models, and first principle calculation of J values Löwdin has emphasized the spin contamination error involved in the BS solutions from the mathematical view point, though he of course has known that the symmetry-breaking problem is closely related to strong correlation effects in many-body physics [s1-s6]. In fact, in 1950s, this problem has emerged from the deformation of nuclear matter as shown in Bohr-Mottelson-Rainwater. They have investigated the newly appeared rotational spectra in these matters. On the other hand, we have interested in spin multiplet spectra newly appeared in diradicals; more (diradical) is different from mono (free) radical. In fact, the spin-polarized BS solutions for strongly correlated systems provide broken-symmetry molecular orbitals that are more or less localized on different radical sites, respectively. This electron localizations via strong electron correlation entail the concept of local spins that are grasped with the spin Hamiltonian models: Yamaguchi K (1974) Chem Phys Lett 28:93; the effective exchange integrals (J) have been introduced as the resonance energy between the BS solutions. The J value is introduced to express the singlet-triplet energy gap in conformity with Löwdin definition: 2J = E(singlet)-E(triplet). The total energy E is obtained by the resonating broken-symmetry (RBS) CI and UNO-CASCI. The computational scheme of the J values for more general case was discussed in our several papers, and eq. 8 has been introduced as an effective computational scheme. The broken-symmetry (BS) solutions are utilized for first-principle computations of J values and projected total energies using J values (in eq. 9) in our many papers. Eq. 8a can be also applicable to any symmetry-adaped computational methods because it is based on the spin-projected scheme. In fact, it can be applicable to exchange-coupled systems; symmetry-adapted MR methods are utilized in this formula. Eq. 8a was first applied to the exchange-coupled binuclear transition-metal complexes: particularly the transition-metal oxides (ref. s53 in the text) that are typical strongly correlated electron systems as shown in the supporting Table S1. It has been applied for molecules-based magnetic materials. This paper is therefore a direct extension of these papers that have been mainly investigated on the BS hybrid DFT methods. Table S1 The effective exchange integrals for transition metal oxides: Yamaguchi K et al. Appl. Quant. Chem. p155 (1986). Nowadays, the newly appeared spin multiplet spectra are analyzed on the basis of the calculated J values; for example the exact diagonalization of the spin Hamiltonian model involving ab initio J values is utilized as a multi-scale multi-physics approach to exchange-coupled systems. MSMP simulations. Accurate computations of J values are really necessary for Fortunately, recent developments of various MRCC methods have enabled us to perform such reliable computations. The MkCC methods have indeed provided reference data that are very useful for elucidation of scope and applicability of several BS computational methods as has demonstrated in Tables 1-7 in the text. This is not at all trivial because applications of MkCC to multi-nuclear transition metal systems are still limited because of several reasons. Alternately, various BS methods have been utilized for qualitative purpose, though systematic comparisons between MRCC and BS results had been lacking until now. Indeed, several BS approaches were still useful for large systems as shown in refs. 66-69. However, one of the serious problems in applications of MkCC to exchange-coupled systems is the size-consistency problem. The J-value should be completely zero at the dissociation limit of a diradical into two fragment free radicals. However, as has already demonstrated by Evangelista et al. (refs. 33-35), this condition is not satisfied in the case of MkMRCC by the use of delocalized reference orbitals over the fragment free radicals. On the other hand, Evangelista et al. (refs. 33-35), have shown that localized reference orbitals can be used for the purpose. Here, our numerical results partly published in the recent paper in refs. 66, 104, 105, 115. The spin contamination error even at the UHF-CCSD level is also serious for reliable computations of the J-values for diradicals as illustrated in the supporting Tables. This is also demonstrated on the basis of the potential curves for methylene. II Supporting Figures and Tables for diradical species in the text Several BS computations and successive MkCC calculations have been performed for diradical species: (1) antiaromatic molecules (a-c), (2) cyclobutadiene derivatives with polar substituents (d-f), and (3) cyclobutadiene derivatives with radical groups (g-h). The optimized geometrical parameters are given. Spin densities by the BS SR solutions for a-h are summarized in supporting Tables S2-S4 and S9-S11, and S13. The occupation numbers and chemical indices for a-c are given in Tables S5-S8, and S12. The optimized Cartesian coordinates for antiaromatic molecules C3H3– (a) 6 0.000000 0.838570 0.000000 6 0.726223 -0.419285 0.000000 6 -0.726223 -0.419285 0.000000 1 0.000000 1.924663 0.000000 1 1.666807 -0.962332 0.000000 1 -1.666807 -0.962332 0.000000 C4H4 (b) 6 0.000000 1.026841 0.000000 6 1.026841 0.000000 0.000000 6 0.000000 -1.026841 0.000000 6 -1.026841 0.000000 0.000000 1 0.000000 2.118166 0.000000 1 2.118166 0.000000 0.000000 1 0.000000 -2.118166 0.000000 1 -2.118166 0.000000 0.000000 6 0.000000 1.218676 0.000000 6 1.159030 0.376592 0.000000 6 0.716320 -0.985930 0.000000 6 -0.716320 -0.985930 0.000000 6 -1.159030 0.376592 0.000000 1 0.000000 2.311326 0.000000 1 2.198201 0.714239 0.000000 1 1.358563 -1.869902 0.000000 1 -1.358563 -1.869902 0.000000 1 -2.198201 0.714239 0.000000 C5H5+ (c) C4H3(NH2) (d) 6 -0.038842 0.667358 0.013902 6 -0.069293 -0.744519 1.496778 6 -0.093175 0.704750 1.455243 1 -0.055984 -1.492092 2.283548 1 -0.140810 1.501553 2.196308 7 -0.111291 1.614637 -0.985894 1 0.225925 2.536881 -0.720770 1 0.284590 1.322053 -1.875949 6 -0.019711 -0.775095 0.047746 1 0.010883 -1.555606 -0.711331 6 0.120170 -1.528913 -1.196781 1 0.110078 -2.614798 -0.937472 6 0.034538 -0.617525 -0.067594 6 -0.066917 -0.734343 1.394492 6 -0.084239 0.697111 1.491929 1 -0.110658 -1.559580 2.106439 1 -0.147771 1.400027 2.325959 8 0.198782 -1.148509 -2.359053 6 0.014554 0.843001 0.065222 1 0.057411 1.677460 -0.634427 0.548783 0.140341 C4H3(CHO) (e) C4H3(NH2)(CHO) (f) 6 0.508276 6 -0.453143 -0.514797 -0.120616 6 -0.659160 -0.684423 1.328768 6 0.311523 0.388020 1.546942 1 -1.267485 -1.323931 1.963483 1 0.727466 6 -0.894389 0.878128 -1.049891 2.430626 -1.387035 1 -1.646940 -1.871474 -1.359181 8 -0.462507 -0.617775 -2.459648 7 1.241858 1.321176 -0.696744 1 1.878883 2.023354 -0.352163 1 1.142331 1.164654 -1.691261 1,2-isomer (g) 6 1.708581 -1.087143 0.000000 1 2.764177 -0.812830 0.000000 1 1.458640 -2.148661 0.000000 6 -1.708581 -1.087143 0.000000 1 -1.458640 -2.148661 0.000000 1 -2.764177 -0.812830 0.000000 6 0.755922 -0.161742 0.000000 6 -0.755922 -0.161742 0.000000 6 -0.677500 1.320688 0.000000 6 0.677500 1.320688 0.000000 1 -1.431821 2.106540 0.000000 1 1.431821 2.106540 0.000000 1,3-isomer (h) 6 -2.397122 0.000000 0.000000 1 -2.957776 -0.934934 0.000000 1 -2.957776 0.934934 0.000000 6 2.397122 0.000000 0.000000 1 2.957776 0.934934 0.000000 1 2.957776 -0.934934 0.000000 6 0.000000 -1.026676 0.000000 6 1.036908 0.000000 0.000000 6 0.000000 1.026676 0.000000 6 -1.036908 0.000000 0.000000 1 0.000000 -2.114833 0.000000 1 0.000000 2.114833 0.000000 Table S2 Spin densities on the carbon atoms in the singlet (LS) and triplet (HS) states of cyclobutadiene (b) by the BS methods. Method UHF UBLYP UB3LYP UCAM-B3LYP UBHandHLYP ULC-BLYP UBD Spin state C1 C2 C3 C4 LS -1.100 1.100 -1.100 1.100 HS 0.544 0.544 0.544 0.544 LS -0.695 0.695 -0.695 0.695 HS 0.525 0.525 0.525 0.525 LS -0.751 0.751 -0.751 0.751 HS 0.526 0.526 0.526 0.526 LS -0.780 0.780 -0.780 0.780 HS 0.525 0.525 0.525 0.525 LS -0.838 0.838 -0.838 0.838 HS 0.528 0.528 0.528 0.528 LS -0.815 0.815 -0.815 0.815 HS 0.524 0.524 0.524 0.524 LS -0.846 0.846 -0.846 0.846 HS 0.532 0.532 0.532 0.532 The up- and down-spin densties on the carbon atoms of cyclobutadiene (b) can be depicted by using spin vector models as shown in Fig. 3A and B in the text. Table S3 Spin densities on the carbon atoms in the singlet (LS) and triplet (HS) states of cyclopentadienyl cation (c) by the BS methods. Method UHF UBLYP UB3LYP UCAM-B3LYP UBHandHLYP ULC-BLYP UBD Spin state C1 C2 C3 C4 C5 LS 0.000 0.620 -0.944 0.944 -0.620 HS 0.429 0.429 0.429 0.429 0.429 LS 0.000 0.332 -0.564 0.564 -0.332 HS 0.418 0.418 0.418 0.418 0.418 LS 0.000 0.368 -0.618 0.618 -0.368 HS 0.418 0.418 0.418 0.418 0.418 LåS 0.000 0.391 -0.648 0.648 -0.391 HS 0.417 0.417 0.417 0.417 0.417 LS 0.000 0.429 -0.703 0.703 -0.429 HS 0.419 0.419 0.419 0.419 0.419 LS 0.000 0.421 -0.685 0.685 -0.421 HS 0.416 0.416 0.416 0.416 0.416 LS 0.000 0.427 -0.702 0.702 -0.427 HS 0.422 0.422 0.422 0.422 0.422 The up- and down-spin densties on the carbon atoms of cyclopentadienyl cation (c) can be depicted by using spin vector model as shown in Fig. 3C in the text. Table S4 Spin densities on the carbon atoms in the singlet (LS) and triplet (HS) states of cyclopropenyl anion (a) by the broken-symmetry (BS) single-reference (SR) methods. Method UHF UBLYP UB3LYP UCAM-B3LYP UBHandHLYP ULC-BLYP UBD Spin state C1 C2 C3 LS 0.000 -0.549 0.549 HS 0.552 0.552 0.552 LS 0.000 -0.453 0.453 HS 0.598 0.598 0.598 LS 0.000 -0.452 0.452 HS 0.597 0.597 0.597 LS 0.000 -0.464 0.464 HS 0.608 0.608 0.608 LS 0.000 -0.454 0.454 HS 0.597 0.597 0.597 LS 0.000 -0.442 0.442 HS 0.610 0.610 0.610 LS 0.000 -0.378 0.378 HS 0.570 0.570 0.570 The up- and down-spin densties on the carbon atoms of cyclopropenyl anion (a) can be depicted by using spin vector model as shown in Fig. 3D in the text. Table S5 Chemical indices for cyclobutadiene (b) by the BS methods. Method HONO HONO-1 nLU B Y nLU b Y UHF 0.933 0.067 87 0.017 0.983 0 UBLYP 0.989 0.011 98 0.002 0.998 0 UB3LYP 0.990 0.010 98 0.004 0.996 0 UCAM-B3LYP 0.995 0.005 99 0.004 0.996 0 UBHandHLYP 0.994 0.006 99 0.007 0.993 0 ULC-BLYP 0.995 0.005 99 0.005 0.995 0 UBD 0.973 0.027 95 0.005 0.995 0 Table S6 Chemical indices for cyclopentadienyl cation (c) by the BS methods. Method HONO HONO-1 nLU b Y nLU b Y UHF 0.995 0.005 99 0.081 0.919 0 UBLYP 0.997 0.003 99 0.006 0.994 0 UB3LYP 0.998 0.002 100 0.014 0.986 0 UCAM-B3LYP 0.999 0.001 100 0.021 0.979 0 UBHandHLYP 0.999 0.001 100 0.030 0.970 0 ULC-BLYP 1.000 0.000 100 0.033 0.967 0 UBD 0.999 0.001 100 0.022 0.978 0 Table S7 Chemical indices for cyclopropenyl anion (a) by the BS methods. Method HONO HONO-1 nLU B Y nLU B Y UHF 1.000 0.000 100 0.111 0.889 1 UBLYP 1.000 0.000 100 0.013 0.987 0 UB3LYP 1.000 0.000 100 0.024 0.976 0 UCAM-B3LYP 1.000 0.000 100 0.033 0.967 0 UBHandHLYP 1.000 0.000 100 0.047 0.953 0 ULC-BLYP 1.000 0.000 100 0.047 0.953 0 UBD 1.000 0.000 100 0.034 0.966 0 Table S8 The Y values (%)a for a-c by the BSb and MRc methods. C3H3– (a) C4H4 (b) C5H5+ (c) UHF 86.6 100.0 98.9 UBDd 94.7 100.0 99.8 UBLYP 97.8 100.0 99.4 UB3LYP 98.0 100.0 99.6 UBHandHLYP 98.8 100.0 99.8 ULC-BLYP 99.1 100.0 99.9 UCAM-B3LYP 98.9 100.0 99.8 CASSCF 21.0 100.0 21.2 ROHF-MkCCSD 93.3 100.0 100.0 CASSCF-MkCCSD 77.0 100.0 55.7 UNO-MkCCSD 87.7 100.0 99.9 Method a The corresponding effective bond order B (%) is give by 100-Y. b Eq. (6b) is used. c d Y = 2c 22 is used. The Y values are calculated in the Fermi vacuum. Table S9 Spin densities on the carbon atoms in the singlet (LS) and triplet (HS) states of amino cyclobutadiene (d) by the BS methods. Method UHF UBLYP UB3LYP UCAM-B3LYP UBHandHLYP ULC-BLYP UBD Spin state C1 C2 C3 C4 N LS -0.943 1.087 -1.126 1.086 -0.035 HS 0.233 0.593 0.708 0.589 0.031 LS -0.506 0.678 -0.700 0.676 -0.115 HS 0.346 0.543 0.532 0.542 0.107 LS -0.568 0.735 -0.764 0.734 -0.102 HS 0.347 0.545 0.547 0.544 0.093 LS -0.603 0.766 -0.795 0.764 -0.097 HS 0.347 0.544 0.556 0.542 0.086 LS -0.668 0.825 -0.859 0.823 -0.082 HS 0.339 0.551 0.578 0.548 0.071 LS -0.645 0.802 -0.832 0.801 -0.091 HS 0.341 0.545 0.566 0.543 0.078 LS -0.668 0.830 -0.869 0.829 -0.080 HS 0.353 0.552 0.572 0.550 0.071 Table S10 Spin densities on the carbon atoms in the LS and HS states of formyl cyclobutadiene (e) by the BS methods. Method UHF UBLYP UB3LYP UCAM-B3LYP UBHandHLYP ULC-BLYP UBD Spin state C1 C2 C3 C4 C5 O LS -1.080 1.042 -1.083 1.020 -0.534 0.547 HS 0.689 0.695 0.674 -0.040 -0.483 0.552 LS -0.683 0.572 -0.670 0.552 -0.037 0.237 HS 0.554 0.438 0.541 0.337 -0.029 0.230 LS -0.736 0.639 -0.727 0.619 -0.092 0.264 HS 0.561 0.466 0.548 0.316 -0.076 0.255 LS -0.765 0.682 -0.759 0.660 -0.124 0.273 HS 0.562 0.497 0.549 0.300 -0.106 0.265 LS -0.821 0.741 -0.815 0.724 -0.197 0.328 HS 0.578 0.515 0.564 0.264 -0.170 0.321 LS -0.801 0.731 -0.796 0.710 -0.147 0.271 HS 0.567 0.530 0.554 0.271 -0.127 0.266 LS -0.830 0.783 -0.824 0.726 -0.140 0.241 HS 0.570 0.531 0.554 0.322 0.530 0.232 Table S11 Spin densities on the carbon atoms in the LS and HS states of 1-amino, 2-formyl cyclobutadiene (f) by the BS methods. Method UHF UBLYP UB3LYP UCAM-B3LYP UBHandHLYP ULC-BLYP UBD Spin state C1 C2 C3 C4 N C5 O LS -0.813 0.986 -1.132 0.997 -0.122 -0.505 0.538 HS 0.099 0.598 0.833 0.433 0.063 0.434 0.508 LS 0.048 -0.103 0.046 0.039 0.016 0.009 -0.051 HS 0.256 0.403 0.610 0.424 0.144 -0.007 0.234 LS 0.033 -0.087 0.010 0.077 0.015 0.009 -0.053 HS 0.246 0.427 0.637 0.419 0.131 -0.053 0.258 LS -0.479 0.620 -0.807 0.635 -0.160 -0.101 0.273 HS 0.235 0.451 0.652 0.416 0.123 -0.081 0.267 LS -0.537 0.679 -0.866 0.699 -0.152 -0.170 0.323 HS 0.223 0.468 0.685 0.412 0.111 -0.142 0.314 LS -0.525 0.673 -0.841 0.685 -0.159 -0.128 0.275 HS 0.220 0.478 0.671 0.412 0.114 -0.104 0.268 LS -0.532 0.720 -0.881 0.697 -0.151 -0.126 0.248 HS 0.244 0.494 0.667 0.423 0.120 -0.109 0.240 Table S12 The Y values (%)a for d-f by the BSb and MRc methods Method C4H3(CHO) (d) C4H3(NH2) (e) C4H2(NH2)(CH(f) UHF 86.6 100.0 98.9 UBDd 94.7 100.0 99.8 UBLYP 97.8 100.0 99.4 UB3LYP 98.0 100.0 99.6 UCAM-B3LYP 98.9 100.0 99.8 UBHandHLYP 98.8 100.0 99.8 ULC-BLYP 99.1 100.0 99.9 CASSCF 21.0 100.0 21.2 ROHF-MkCCSD 93.3 100.0 100.0 CASSCF-MkCCSD 77.0 100.0 55.7 UNO-MkCCSD 87.7 100.0 99.9 a The corresponding effective bond order B (%) is give by 100-Y. b Eq. (6b) is used. c d is used. The Y values are calculated in the Fermi vacuum. Table S13 Spin densities on the carbon atoms in the singlet (LS) and triplet (HS) states of 1,2-bis(methylene) cyclobutadiene (g) by the BS methods. Method UHF UBLYP UB3LYP UCAM-B3LYP UBHandHLYP ULC-BLYP UBD Spin state C1 C2 C3 C4 C5 C6 LS -0.651 0.651 0.647 -0.647 0.754 -0.754 HS 0.652 0.652 -0.538 -0.538 1.037 1.037 LS 0.000 0.000 0.000 0.000 0.000 0.000 HS 0.340 0.340 -0.006 -0.006 0.725 0.725 LS 0.000 0.000 0.000 0.000 0.000 0.000 HS 0.362 0.362 -0.079 -0.079 0.781 0.781 LS 0.000 0.000 0.000 0.000 0.000 0.000 HS 0.387 0.387 -0.142 -0.142 0.821 0.821 LS 0.000 0.000 0.000 0.000 0.000 0.000 HS 0.414 0.414 -0.197 -0.197 0.860 0.860 LS 0.000 0.000 0.000 0.000 0.000 0.000 HS 0.418 0.418 -0.215 -0.215 0.864 0.864 LS -0.001 0.001 0.001 -0.001 0.001 -0.001 HS 0.393 0.393 -0.152 -0.152 0.843 0.843 Table S14 Spin densities on the carbon atoms in the singlet (LS) and triplet (HS) states of 1,3-bis(methylene) cyclobutadiene (h) by the broken-symmetry (BS) single-reference (SR) methods. Method UHF UBLYP UB3LYP UCAM-B3LYP UBHandHLYP ULC-BLYP UBD Spin state C1 C2 C3 C4 C5 C6 LS 0.000 0.000 -0.990 0.000 0.990 0.000 HS 0.909 0.909 1.098 -0.827 1.098 -0.827 LS 0.000 0.000 -0.622 0.000 0.622 0.000 HS 0.498 0.498 0.744 -0.172 0.744 -0.172 LS 0.000 0.000 -0.692 0.000 0.692 0.000 HS 0.547 0.547 0.791 -0.261 0.791 -0.261 LS 0.000 0.000 -0.746 0.000 0.746 0.000 HS 0.587 0.587 0.823 -0.330 0.823 -0.330 LS 0.000 0.000 -0.787 0.000 0.787 0.000 HS 0.639 0.639 0.865 -0.411 0.865 -0.411 LS 0.000 0.000 -0.803 0.000 0.803 0.000 HS 0.632 0.632 0.858 -0.409 0.858 -0.409 LS 0.000 0.000 -0.790 0.000 0.790 0.000 HS 0.601 0.601 0.885 -0.383 0.885 -0.383 Table S15 Acronyms given in the text. Acronym Method MkCCSD Mukherjee’s state-specific coupled cluster singles and doubles UHF-CCSD(T) Spin-unrestricted Hartree-Fock based coupled cluster singles and doubles (with perturbative triples corrections) UBD(T) Coupled cluster doubles (with perturbative triples corrections) based on spin-unrestricted Brueckner determinant AP Approximate spin projection CASSCF Complete active space self-consistent field DDCI Difference dedicated configuration interaction CASPT2 Second-order perturbation theory based on the Complete active space self-consistent field wave function NEVPT2 Second-order n-electron valence state perturbation theory XLSD Exchange local spin density CAS-DFT Complete active space density functional theory MCOEP Multiconfigurational optimized effective potential XGGA Exchange generalized gradient approximation UDFT Spin-unrestricted density functional theory NO Natural orbital ROHF Spin-restricted open-shell Hartree-Fock UNO UHF natural orbital DNO UDFT natural orbital CMO Corresponding molecular orbital BLYP Becke’s 1988 exchange functional with Lee-Yang-Parr correlation functional B3LYP Becke’s three parameter hybrid functional with Lee-Yang-Parr correlation functional BHandHLYP Becke’s half-and-half hybrid functional CAM-B3LYP Becke’s three parameter hybrid functional with Lee-Yang-Parr correlation functional using the Coulomb-attenuating method LC-BLYP Long-range corrected Becke’s 1988 exchange functional with Lee-Yang-Parr correlation functional EOM-CCSD Equation-of-motion coupled cluster singles and doubles MR-AQCC Multireference averaged quadratic coupled cluster