Beasley BST 612 Assignment 2 – 150 points Regression Analysis Frigerio et al. measured the energy intake (EI) of 32 Gambian women. Sixteen of the subjects were lactating (X=1) and the remainder were non-pregnant non-lactating (X=0). The values of EI were also converted to ranks (REI). Import the data in BST612ASSIGN2-EI.XLS into SPSS, JMP, or SAS. Use either SPSS (Analyze-Regression-Linear); SAS (PROC REG) or JMP (Analyze-Fit Y by X ); to compute the regression solution (Y = b0 + b1X) for regressing EI and REI (Dependent, Response, Y variable) on to X (Independent, Factor, X variable). 2 1. What is the Model R ? EI R = _______ REI R = _______ 2 2 EI 2. What are results of the Regression Models? F-ratio (2 points). REI p-value F-ratio p-value (3 points) 3. For EI, What is the value of b0? __________ (1 point) 4. What is the value of b1? ________ (1 point) 5. For REI, What is the value of b0? __________ (1 point) 6. What is the value of b1? ________ (1 point) 7. What is the predicted value for X = 1 (Lact group)? EI _______ REI ______ (2 points) 8. What is the predicted value for X = 0 (NPNL group)? EI _______ REI ______ (2 points) 9. For EI, How would you interpret the regression intercept (b0)? (3 points). 10. For EI, How would you interpret the regression slope (b1)? (3 points). 11. For EI, What is symbolic notation for the null hypothesis for this REGRESSION model? (3 points). 12. What is this null hypothesis mean in words? (2 points) 13. Use either SPSS (Analyze-Correlate-Bivariate); JMP (Analyze-Multivariate MethodsMultivariate); or SAS (PROC CORR) to compute the Pearson and Spearman correlations. Pearson r = ___________ (4 points) Spearman r = ___________ Pearson r2 = ___________ Spearman r2 = ___________ 14. How do these values in 13 relate to the values in question 1? (3 points) 1 BST 612 Assignment 2 – 150 points Beasley Bivariate data with a Dichotomous variable 15. Use either SPSS (Graph-Scatter-Simple); JMP (Fit Y by X); or SAS (PROC CORR or GPLOT) to create a scatterplot with EI on the Y axis and X on the X axis. (3 points). 16. By examining the scatterplot, do the data appear to be homoscedastic or heteroscedastic? Explain. (3 points). SPSS: Use Analyze-Compare Means-Independent Samples T-Test and Use Analyze-Compare Means-One Way ANOVA JMP: Change the X variable to be Nominal, then Use Analyze-Fit Y by X Under the Oneway Analysis Banner select the Means/Anova/Pooled t Means and Std Dev SAS: Use PROC TTEST; CLASS X; VAR EI REI; RUN; and Use PROC GLM; CLASS X; MODEL EI REI = X / solution; MEANS group / t; RUN; 17. Enter the following Results. NPNL Lact X=0 X=1 EI Mean SD (10 points total) 95% CI Lower Bound Upper Bound Mean Diff t F p-value SE(MDiff) n Model R2 = _____ df 18. In symbolic notation, what was the null hypothesis for the previous analysis? (2 points) 19. Explain how are the H0 in (18) and the H0 in (11) equivalent? (3 points). 20. Do you think there is a causal relationship between these variables? Explain. (3 points). Nonparametric Alternative JMP: Change the X variable to be Nominal, then Use Analyze-Fit Y by X Under the Oneway Analysis Banner select the Nonparametric Wilcoxon Test SPSS: Use Analyze-Nonparametric Tests and K Independent Samples. Place EI and REI in the Test Variables List and X as the Grouping variable and Define the range from 0 to 1. Select the Descriptives option. SAS: Use PROC NPAR1WAY; CLASS X; VAR EI REI; RUN; and EI 21. What are results of the Kruskal-Wallis Test? 2 REI p-value 2 p-value (4 points) 22. Divide the 2 value by (N-1): 2/(N-1) = ____________ (2 points) 23. How does this value from 22 related to previous results in question 1? (3 points) 24. Write a brief interpretation of these results. (6 points) 2 BST 612 Assignment 2 – 150 points Beasley Based on Gravely and Littlefield, researcher conducted a study to determine the cost of J = 3 prenatal clinical staffing models: (j = 1) Physician-based; (j = 2) Mixed (M.D., R.N.) staffing; and (j = 3) Clinical Nurse Specialist with physician available for consultation. The subjects were women who were 18 years old or older, obtained prenatal care at one of the three facilities, and who had delivered within 48 hours of the interview. The cost was defined as the amount of money billed over and above the amount covered by the patient’s health insurance (AMNT). These values were also converted to Ranks (RAMNT). There are set of dummy coded variables (Xj) that represent group membership. The data are in file BST612-ASSN2-AMNT.xls. Use either SPSS (Analyze-Regression-Linear); SAS (PROC REG) or JMP (Fit Model); to compute the regression solution (Y = b0 + b1X1 + b2X2) for regressing AMNT and RAMNT (Dependent, Response, Y variable) on to X (Independent, Factor, X variable). 25. What is the Model R2? 26. What are results of the Regression Models? 27. For AMNT, AMNT R2 = _______ AMNT F-ratio p-value RAMNT R2 = _______ F-ratio (2 points). RAMNT p-value (3 points) What are the values of b0? ________ (1 points) b1? ________ (1 points) b2? ________ (1 points) 28. For RAMNT, What are the values of b0? ________ (1 points) b1? ________ (1 points) b2? ________ (1 points) 29. What is the predicted value for X1 = 1? AMNT _______ RAMNT ______ (2 points) 30. What is the predicted value for X2 = 1? AMNT _______ RAMNT ______ (2 points) 31. How would you interpret the regression intercepts (b0)? (3 points). 32. How would you interpret the regression slopes (b1 and b2)? (3 points). 33. For AMNT, What is symbolic notation for the null hypothesis for the FULL REGRESSION model? (3 points). 34. What is this null hypothesis mean in words?. (2 points). 3 BST 612 Assignment 2 – 150 points Beasley SPSS: Use Analyze-General Linear Model-Univariate and Select AMNT as the Dependent Variable and Group as Fixed Factor Select Options – Descriptive statistics Estimates of Effect Size Observed Power Parameter Estimates Residual Plot Select Post-Hoc and Move Group to the Post Hoc Tests for box and Select the Tukey option JMP: Change the GROUP variable to be Nominal, then Use Analyze-Fit Y by X Under the Oneway Analysis Banner select the Means/Anova/Pooled t and Means and Std Dev Compare Means – All Pairs, Tukey HSD options SAS: Use PROC GLM; CLASS group; model AMNT RAMNT = group / solution; MEANS group / tukey; RUN; 35. Complete the ANOVA Source Table with SS, df, MS, and F, and test the null hypothesis in (1) at the = .05 level of significance for AMNT. (5 points) Source SS df Between ______ ___ MS F p-value _____ ____ _____ Within _______ ___ _____ ___________________________________________________________________________ Total ________ ___ 36. State the null hypotheses for the ONE-WAY ANOVA. (3 points). 37. Explain how are the H0 in (36) and the H0 in (33) equivalent? (4 points). 44. What is the FULL Model R2? R2 = _______ (2 points) 45. Compute Tukey HSD for each pairwise comparison. (6 points). Mean Diff Lower Bound Upper Bound 1 vs 2 1 vs 3 2 vs 3 4 Beasley BST 612 Assignment 2 – 150 points 46. Complete the ANOVA Source Table with SS, df, MS, and F, and test the null hypothesis in (1) at the = .05 level of significance for RAMNT. (5 points) Source SS df Between ______ ___ MS F p-value _____ ____ _____ Within _______ ___ _____ ___________________________________________________________________________ Total ________ ___ 47. What is the Model R2? R2 = _______ (2 points) 48. Compute Tukey HSD for each pairwise comparison. (6 points). Mean Diff Lower Bound Upper Bound 1 vs 2 1 vs 3 2 vs 3 49. What are results of the Kruskal-Wallis Test? 2 AMNT p-value 2 RAMNT p-value (4 points) 50. Divide the 2 value by (N-1): 2/(N-1) = ____________ (2 points) 51. How does this value related to previous results? (3 points) 52. Based on these results explain which Staffing Models are significantly different and if any should be preferred over another. (3 points). 53. Do you think there is a causal relationship between these variables? Explain. (3 points). 54. Write a brief Results section based on your answers. The Results section should usually report inferential tests and effect magnitudes in the text, while descriptive statistics should be reported in a table or graph. (7 points) 5 BST 612 Assignment 2 – 150 points Beasley Multiple Group Comparisons (ANOVA Models) EXTRA CREDIT (up to 20 points) EC1. Determine the F-ratio which results from the given one-way ANOVA data. Source df SS MS F Between 4 30.5 _____ ______ Within ____ _____ _____ ________________________________________________ Total 99 165.0 (4 points) EC2. For the data in question EC1, the estimated percent variance in the dependent variable accounted for by the independent variable is: 2 = R2 = _______________ (2 points) In a one factor ANOVA with J = 4 groups and nj = 5 subjects per group: EC3. Y 1 = 22 Y 2 = 24 What is the value for SS Between? Y 3 = 20 Y 4 = 26 _________________ EC4. s1 = 2.0 s2 = 2.2 What is the value for SS Within? s3 = 2.1 s4 = 2.3 _________________ EC5. Reconstruct the ANOVA Source Table Source df SS MS F Between ____ _____ ______ _____ Within ____ _____ ______ ________________________________________________ Total _____ (4 points) (4 points) (4 points) EC6. For the data in question EC5, the estimated percent variance in the dependent variable accounted for by the independent variable is: 2 = R2 = _______________ (2 points) 6