Cell Structure and Function Chapter 4 4.1 What is a Cell? Each cell has a plasma membrane, cytoplasm, and a nucleus (in eukaryotic cells) or a nucleoid (in prokaryotic cells) cytoplasm DNA plasma membrane a Bacterial cell (prokaryotic) Fig. 4.3, p. 52 cytoplasm DNA in nucleus plasma membrane b Plant cell (eukaryotic) Fig. 4.3, p. 52 cytoplasm DNA in nucleus plasma membrane c Animal cell (eukaryotic) Fig. 4.3, p. 52 Animation: Overview of cells CLICK HERE TO PLAY Components of Cell Membranes Lipid bilayer “head” two “tails” Fig. 4.4, p. 53 fluid lipid bilayer fluid Fig. 4.4, p. 53 extracellular environment one layer of lipids one layer of lipids cytoplasm membrane protein Fig. 4.4, p. 53 Cell Size and Shape Surface-to-volume ratio limits cell size Key Concepts: WHAT ALL CELLS HAVE IN COMMON Each cell has a plasma membrane, a boundary between its interior and the outside environment The interior consists of cytoplasm and an innermost region of DNA Animation: Surface-to-volume ratio CLICK HERE TO PLAY 4.2 How Do We See Cells? Three key points of the cell theory: • All organisms consist of one or more cells • The cell is the smallest unit that retains the capacity for life • A cell arises from the growth and division of another cell Relative Sizes Fig. 4.6, p. 54 Microscopes Different microscopes use light or electrons to reveal details of cell shapes or structures path of light rays (bottom to top) to eye Ocular lens enlarges primary image formed by objective lenses. prism that directs rays to ocular lens Objective lenses (those closest to specimen) form the primary image. Most compound light microscopes have several. stage supports microscope slide Condenser lenses focus light rays through specimen. illuminator light source (in base) Fig. 4.7, p. 55 Animation: How a light microscope works CLICK HERE TO PLAY incoming electron beam condenser lens (focuses a beam of electrons onto specimen) specimen objective lens intermediate lens projector lens viewing screen (or photographic film) Fig. 4.7, p. 55 Animation: How an electron microscope works CLICK HERE TO PLAY Five Different Views Key Concepts: MICROSCOPES Microscopic analysis supports three generalizations of the cell theory: • Each organism consists of one or more cells and their products • A cell has a capacity for independent life • Each new cell is descended from a living cell 4.3 Membrane Structure and Function Each cell membrane is a boundary (lipid bilayer) that controls the flow of substances across it Fluid mosaic model • Membrane is composed of phospholipids, sterols, proteins, and other components • Phospholipids drift within the bilayer Membrane Proteins Many proteins are embedded in or attached to cell membrane surfaces • Receptors, transporters, communication proteins, and adhesion proteins Plasma (outer) membrane also incorporates recognition proteins Common Membrane Proteins EXTRACELLULAR FLUID A glucose transporter allows glucose to cross the membrane through a channel in its interior. An ATP synthase, which makes ATP when H+ crosses a membrane through its interior. A calcium pump moves calcium ions across the membrane; requires ATP energy. LIPID B cell receptor. Recognition protein that BILAYER It binds to bacteria, identifies a cell as belonging other foreign agents. to one’s own body. phospholipid protein filaments of the cytoskeleton CYTOPLASM Fig. 4.9, p. 57 Membrane Structure Studies human cell mouse cell fusion into hybrid cell proteins from both cells in fused membrane Fig. 4.10, p. 57 Key Concepts: COMPONENTS OF CELL MEMBRANES All cell membranes are mostly a lipid bilayer (two layers of lipids) and a variety of proteins The proteins have diverse tasks, including control over which water-soluble substances cross the membrane at any given time Animation: Lipid bilayer organization CLICK HERE TO PLAY Animation: Cell membranes CLICK HERE TO PLAY 4.4 Introducing Prokaryotic Cells Bacteria and archaeans • The simplest cells • The groups with greatest metabolic diversity Biofilms • Shared living arrangements of prokaryotes Prokaryote Structure Cell wall • Surrounds plasma membrane Flagella • Used for motion Pili • Protein filaments used for attachment • “Sex” pilus transfers genetic material Prokaryote Structure Prokaryote Structure cytoplasm, with ribosomes bacterial flagellum Most prokaryotic cells have a cell wall outside the plasma membrane, and many have a thick, jellylike capsule around the wall. DNA in cell plasma pilus capsule wall membrane nucleoid Fig. 4.11, p. 58 Animation: Typical prokaryotic cell CLICK HERE TO PLAY 4.5 Microbial Mobs Biofilm formation Key Concepts: PROKARYOTIC CELLS Archaeans and bacteria are prokaryotic cells which have few, if any, internal membraneenclosed compartments In general, they are the smallest and structurally the simplest cells 4.6 Introducing Eukaryotic Cells Start with a nucleus and other organelles • Carry out specialized functions inside a cell plasma membrane nucleus mitochondria Fig. 4.14, p. 60 cell wall plasma membrane central vacuole nucleus chloroplast Fig. 4.14, p. 60 Components of Eukaryotic Cells 4.7 Components of The Nucleus Nucleus separates DNA from cytoplasm • Chromatin (all chromosomal DNA with proteins) • Chromosomes (condensed) Nucleolus assembles ribosome subunits Nuclear envelope encloses nucleoplasm • Pores, receptors, transport proteins Nucleus and Nuclear Envelope Nucleus and Nuclear Envelope Nucleus and Nuclear Envelope Animation: Nuclear envelope CLICK HERE TO PLAY nuclear envelope chromatin nucleolus cytoplasm Fig. 4.15, p. 61 nucleus pore across the nuclear envelope nucleoplasm nucleolus chromatin nuclear envelope’s outer lipid bilayer merging with an ER membrane Fig. 4.15, p. 61 nuclear pore nuclear envelope (two lipid bilayers) cytoplasm Fig. 4.15, p. 61 4.8 The Endomembrane System Endoplasmic reticulum (ER) • An extension of the nuclear envelope • RER modifies new polypeptide chains • SER makes lipids; other metabolic functions Golgi bodies • Further modify polypeptides • Assemble lipids The Endomembrane System Vesicles • Endocytic and exocytic: Transport or store polypeptides and lipids • Peroxisomes: Digest fatty acids and amino acids; break down toxins and metabolic by-products • Lysosomes: Intracellular digestion (animals) • Central vacuole: Storage; fluid pressure (plants) Endomembrane System Endomembrane System Endomembrane System nucleus rough ER smooth ER Golgi body vesicles Fig. 4.16, p. 62 Animation: The endomembrane system CLICK HERE TO PLAY chromatin pore cytoplasm nucleolus nuclear envelope (two lipid bilayers) the cell nucleus ribosome vesicle rough ER Fig. 4.16, p. 62 smooth ER channel, cross-section budding vesicle plasma membrane smooth ER Golgi body Fig. 4.16, p. 62 4.9 Mitochondria and Chloroplasts Mitochondria • Break down organic compounds by aerobic respiration (oxygen-requiring) • Produce ATP Chloroplasts • Produce sugars by photosynthesis Mitochondria and Chloroplasts two outer membranes stroma thylakoids (inner membrane system folded into flattened disks) Fig. 4.18, p. 63 Animation: Structure of a chloroplast CLICK HERE TO PLAY Animation: Structure of a mitochondrion CLICK HERE TO PLAY 4.10 Visual Summary: Plant Cells Visual Summary: Animal Cells CELL WALL CHLOROPLAST CENTRAL VACUOLE NUCLEUS nuclear envelope nucleolus DNA in nucleoplasm CYTOSKELETON microtubules microfilaments intermediate filaments (not shown) RIBOSOMES ROUGH ER MITOCHONDRION SMOOTH ER PLASMODESMA GOLGI BODY PLASMA MEMBRANE a Typical plant cell components. LYSOSOMELIKE VESICLE Fig. 4.19, p.65 NUCLEUS nuclear envelope nucleolus DNA in nucleoplasm CYTOSKELETON microtubules microfilaments intermediate filaments RIBOSOMES ROUGH ER MITOCHONDRION SMOOTH ER CENTRIOLES GOLGI BODY PLASMA MEMBRANE b Typical animal cell components. LYSOSOME Fig. 4.19, p. 64 NUCLEUS nuclear envelope nucleolus DNA in nucleoplasm CYTOSKELETON microtubules microfilaments intermediate filaments RIBOSOMES ROUGH ER MITOCHONDRION SMOOTH ER CENTRIOLES GOLGI BODY PLASMA MEMBRANE b Typical animal cell components. LYSOSOME Stepped Art Fig. 4-19, p. 64 Animation: Common eukaryotic organelles CLICK HERE TO PLAY 4.11 Cell Surface Specializations Most prokaryotes, protists, fungi, all plant cells have a cell wall around their plasma membrane • Protects, supports, maintains cell shape • Primary and secondary cell walls Plasmodesmata across cell walls connect plant cells Plant Cell Walls plasma membrane middle lamella cytoplasm primary cell wall secondary cell wall (added in layers) primary cell wall pipeline made of abutting cell walls Fig. 4.20, p. 66 Plant Cell Walls middle lamella Plasmodesmata plasmodesma middle lamella Fig. 4.20, p. 66 Animation: Plant cell walls CLICK HERE TO PLAY Plant Cuticle Protective surface secretion, limits water loss thick, waxy cuticle at leaf surface cell of leaf epidermis photosynthetic cell inside leaf Fig. 4.21, p. 67 Extracellular Matrixes Surrounds cells of specific tissues Animal Cell Junctions Connect cells of animals • Adhering junctions, tight junctions, gap junctions free surface of epithelial tissue different kinds of tight junctions gap junction basement membrane (extracellular matrix) adhering junction Fig. 4.23, p. 67 Animation: Animal cell junctions CLICK HERE TO PLAY Key Concepts: EUKARYOTIC CELLS Cells of protists, plants, fungi, and animals are eukaryotic; they have a nucleus and other membrane-enclosed compartments They differ in internal parts and surface specializations 4.12 The Dynamic Cytoskeleton Components of the cytoskeleton • Microtubules • Microfilaments • Intermediate filaments (in most) Fig. 4.12, p. 59 Fig. 4.12, p. 59 Fig. 4.12, p. 59 Components of the Cytoskeleton tubulin subunit 25 nm Fig. 4.24, p. 68 actin subunit 5–7 nm Fig. 4.24, p. 68 one polypeptide chain 8–12 nm Fig. 4.24, p. 68 Cytoskeleton Function Organizes and moves cell parts Reinforces cell shape Interactions between motor proteins and microtubules in cilia, flagella, and pseudopods can move the whole cell Animation: Cytoskeletal components CLICK HERE TO PLAY Motor Protein: Kinesin Moves vesicles along microtubules Animation: Motor proteins CLICK HERE TO PLAY Flagellum and Pseudopods Eukaryotic Flagella and Cilia: Dynein Eukaryotic Flagella and Cilia: Dynein pair of microtubules in a central sheath protein spokes plasma membrane pair of microtubules dynein arms dynein arms basal body Fig. 4.27, p. 69 Animation: Flagella structure CLICK HERE TO PLAY Key Concepts: A LOOK AT THE CYTOSKELETON Diverse protein filaments reinforce a cell’s shape and keep its parts organized As some filaments lengthen and shorten, they move chromosomes or other structures to new locations