Modelling aspects of solid tumour growth
Philip K. Maini
Centre for Mathematical Biology
Mathematical Institute;
Oxford Centre for Integrative Systems Biology,
Biochemistry;
Oxford
• Using mathematical models to explore the interaction of a VERY SMALL subset of processes in cancer with a view to increasing our intuition in a very small way and eventually …
• Acid-mediated invasion/Somatic evolution/therapeutic strategies
________________________________________
• Vascular Tumour Growth
• Colorectal Cancer
Cell proliferation and cell death (apoptosis) are tightly controlled by genes to maintain homeostasis (steady state). Mutations in these genes upset the balance and the system moves out of steady state.
How can we control a growing population of cells?
• Tumour cells undergo glycolytic
(anaerobic) metabolism presumably because there is a lack of oxygen.
• But sometimes in the presence of sufficient oxygen they still do this – seems very strange because it is 20 times less efficient than aerobic metabolism
Acid Mediated Invasion Hypothesis
• A bi-product of the glycolytic pathway is lactic acid – this lowers the extracellular pH so that it favours tumour cell proliferation AND it is toxic to normal cells.
• Gatenby and Gawslinski (1996)
Experimental results (Martin and
Jain)
• Fasano et al, Slow and fast invasion waves (Math Biosciences, 220, 45-56,
2009)
• Predicts ECM density is relatively unchanged – inconsistent with other models but consistent with experimental observations .
K. Smallbone, D.J. Gavaghan (Oxford)
R.A. Gatenby, R.J. Gillies (Moffitt
Cancer Research Inst)
J.Theor Biol, 244, 703-713, 2007
Cell-environment Interactions
DCIS Model
Nature Rev Cancer 4: 891-899 (2004)
Model Development
• Hybrid cellular automaton:
– Cells as discrete individuals
• Proliferation, death, adaptation
– Oxygen, glucose, H+ as continuous fields
– Calculate steady-state metabolite fields after each generation
• Heritable phenotypes:
– Hyperplastic: growth away from basement membrane
– Glycolytic: increased glucose uptake and utilisation
– Acid-resistant: Lower extracellular pH to induce toxicity
• Aerobic:
• Anaerobic:
Cellular Metabolism glucose glucose
6 O
2
2 lactic
6 CO
2 acid
36 ATP
2 ATP
• Assume:
– All glucose and oxygen used in these two processes
– Normal cells under normal conditions rely on aerobic respiration alone glucose : oxygen :
ATP :
H
:
g
g normal kg glycolytic
c
a
c
c
n (
g
c ) cell cell
h
g
c
Two parameters: n = 1/18
1 < k ≤ 500
Automaton Rules
• At each generation, an individual cell’s development is governed by its rate of ATP production φ a and extracellular acidity h
– Cell death
• Lack of ATP:
• High acidity:
– Proliferation
a
a
0 p dea
h/h h/h
N
T normal acid resistant p div
(
a
a
0
) /( 1
a
0
)
– Adaptation
Variation in Metabolite Concentrations
H + glucose oxygen
• For further details, see Gatenby,
Smallbone, PKM, Rose, Averill, Nagle,
Worrall and Gillies, Cellular adaptations to hypoxia and acidosis during somatic evolution of breast cancer, British J. of
Cancer, 97, 646-653 (2007)
• Add bicarbonate to neutralise the acid
(Natasha Martin, Eamonn Gaffney, Robert
Gatenby, Robert Gillies)
Model Equations: Tumour
Compartment
Model Equations: Blood
Compartment
Equivalent dose less effective in humans
• There are 3 timescales and lots of small and large parameters so can do asymptotics and obtain an approximate uniformly valid solution on which to do sensitivity analysis.
• Periodic pulsing of acid may affect somatic evolution by delaying the onset of the invasive phenotype (hyperplastic, glycolytic and acid-resistant) (Smallbone,
PKM, Gatenby, Biology Direct, 2010)
Cancer Growth
Tissue Level Signalling: (Tumour Angiogenesis Factors)
Oxygen etc
Partial Differential Equations
Cells:
Intracellular: Cell cycle,
Molecular elements
Automaton Elements
Ordinary differential equations
• Tomas Alarcon
• Markus Owen
• Helen Byrne
• James Murphy
• Russel Bettridge
• Series of papers by Secomb and Pries modelling vessels in the rat mesentry – they conclude:
R(t) = radius at time t:
R(t+dt) = R(t) + R dt S
S = M + Me – s + C
M = mechanical stimulus (wall shear stress)
Me = metabolic demand s = shrinkage
C= conducted stimuli: short-range (chemical release under hypoxic stress?) long-range (mediated through membrane potential?)
• By varying the strengths of the different adaptation mechanisms we can hypothesise how defects in vasculature lead to different types of tumours: Conclude that losing the long range stimuli looks a reasonable assumption
• Tim Secomb has shown this more convincingly recently (PLoS Comp Biol 2009)
Potential uses of the model
• Chemotherapy
• Impact of cell crowding and active movement
• Vessel normalisation
• Recently, we have added in angiogenesis
(Owen, Alarcon, PKM and Byrne, J.Math.
Biol, 09) and gone to 3D (Holger Perfahl)
• Movie – both2_mov
An integrative computational model for intestinal tissue renewal
• Van Leeuwen, Mirams, Walter, Fletcher,
Murray, Osbourne, Varma, Young, Cooper,
Pitt-Francis, Momtahan, Pathmanathan,
Whiteley, Chapman, Gavaghan, Jensen,
King, PKM, Waters, Byrne (Cell
Proliferation, 2009)
• CHASTE – Cancer, Heart And Soft Tissue
Environment
• Modular
The effects of different individual cell-based approaches
• (to appear in Phil Trans R Soc A)
• Simple multiscale model – gain some insight into why combination therapies might work
• Heterogeneities in environment play a key role
• No matrix included! – Anderson has shown adhesivity could be important
• Cellular automaton model – what about using Potts model, cell centred, cell vertex models? – DOES IT MAKE A DIFFERENCE
(Murray et al, 2009; Byrne et al, 2010)
• There are many other models and I have not referred to any of them! (Jiang, Bauer, Chaplain, Anderson, Lowengrub, Drasdo,
Meyer-Hermann, Rieger, Cristini, Enderling, Meinke, Loeffler, TO
NAME BUT A FEW)
• Colorectal: David Gavaghan, Helen Byrne,
James Osborne, Alex Fletcher, Gary
Mirams, Philip Murray, Alex Walter, Joe
Pitt-Francis et al (EPSRC)
• Vascular: Tomas Alarcon, Helen Byrne,
Markus Owen, Holger Perfahl (EU -5 th and
6 th frameworks)
• Natasha Martin, Kieran Smallbone,
Eamonn Gaffney, David Gavaghan, Bobs
Gatenby and Gillies
• Funded DTC (EPSRC), NCI (NIH)