Resistance: Cotton bollworms and Bt toxins Derek Russell Natural Resources Institute (UK) Genetics Dept, University of Melbourne (Australia) With thanks to Dr Keshav Kranthi Central Institute for Cotton Research, Nagpur Resistance • A genetic change in a population as a result of mortality caused by a chemical or other toxin (e.g.Bt) • Those organisms with more natural tolerance to the toxin survive and breed and pass on the ability to survive • In time the whole population becomes able to survive the toxin – they have become resistant! Antibiotic Resistance • You have multiplying bacteria in a cut. • The doctor gives you an antibiotic • If you don’t take the full dose – the most tolerant bacteria survive and breed quickly • If you do take the full dose but only once, it is possible that a few bacteria survive to breed • Therefore you are told to take the full 5 day course at full rates to kill even the tolerant bacteria Pests of cotton in India Killed by Bt cotton Not affected • Bollworms • • • • - cotton bollworm - pink bollworm - spiny bollworm Leafworms (mostly) Aphids Jassids Mites Main pest groups Bollworms o African/American - Helicoverpa armigera o Spiny/Spotted - Earias insulana/biplaga o Pink - Pectinophora gossypiella Leafworms o Cotton leafworms – Spodoptera sp. Bt cotton targets • Cotton bollworm Helicoverpa armigera 181 host plants - 69 crop species losses - US $ 540 mill annually • Spiny bollworms - Earias insulana and E. vitella • Pink bollworm - Pectinophora gossypiella Helicoverpa armigera (American bollworm) (CAB, 1993) A key pest of cotton and vegetables: Cotton bollworm – Helicoverpa armigera Photos: CIRAD Commercialised transgenic plants resistant to insects Cotton: 1st commercialised in 1996 -2004: 9 countries; 9.0 mill ha 28% global cotton area 11% of global GMO area - Insect resistance and herbicide tolerance traits - 25% increase in area from 2003-2004 Maize: 1st commercialised in 1996 -2004 : 8 countries 19.3 mill ha 14% global maize area 23% of global GMO area - Insect resistance and herbicide tolerance traits - also 25% increase in area from 2003-4 Potato: first commercialised in 1996, withdrawn in 2001 Modified from Giband 2004 Genetically Modified Bt plants Bt plants have: Gene (DNA) for producing the insecticidal toxin from a soil bacterium Promotor ‘switches’ on either side of the gene to turn it on and off Other regulatory genes or introns May have ‘Marker’ gene used only in the selection process (used to be an antibiotic - kanamycin) Note: • • • The plant itself makes the toxin in its tissues using the bacterial gene The step to turn the pro-toxin into the toxin in the insect gut is not necessary The gene may be ‘turned on’ more in some tissues than others. Bacillus thuringiensis (Bt): More than a century of history … • 1901 : Discovered in silkworm by a Japanese bacteriologist Shigetane ISHIWATA “Sottokin”. • 1911 : A new isolation by Ernst BERLINER on Ephestia kuehniella (Zeller) larvae from Thuringe (Germany) Bacillus thuringiensis Berliner •1938 : First commercial preparation (Sporéine) by Libec Laboratories in France, used against meal moth Ephestia sp. in flour. : Bt has been used for more than 65 years as biological insecticide (>90% of the total biopesticides market). •1981 : first cloning of a Cry gene •1985 : First insect resistant transgenic plant •1990 : First commercialization of a transgenic plant (in China : virus resistant tobacco). •1995: First Bt transgenic plant commercialised in USA •2005: more than 81 mill ha of transgenic crops all over the world. Mode of action of Cry toxins J-M Vassal - CIRAD Mode of action of Cry toxins Domain I Domain III Domain II Aminopeptidases N Cadherins R. A. de Maagd, 2001 Resistance mechanisms for Bt (b) Change solubilisation of the toxin Resist Resist (c) prevent passage through the peritrophic membrane (e) Prevent membrane insertion and pore formation Resist Insects controlled by transgenic plants: Cotton Toxin Cry1Ac* (1996) Cry1Ac + Cry2Ab (2003) Cry1Ac + Cry1Ab and or CpTi (1997) Cry1Ac + Cry1Fa (2005) Modified from Giband 2004 Vip3A (2005?) Insects controlled Bollworms: Cotton, Pink, Spiny Commercial name Bollgard ® Delta and Pineland/Monsanto Bollworms: Cotton, Pink, Spiny Leafworms: Spodoptera spp Bollgard II ® Delta and Pineland/Monsanto Numerous Varieties Bollworms: Cotton, Pink, Spiny Chinese Agademy of Agric. Sciences Bollworms: Cotton, Pink, Spiny Leafworms: Spodoptera spp WideStrike ® Dow AgroSciences Bollworms: Cotton, Pink, Spiny Leafworms: Spodoptera spp Cutworms: Agrotis sp … VipCot ® Syngenta World Bt cotton adoption – 2003(2004) Countries with pest complex like India (esp.Helicoverpa armigera) % Area Insecticide Insecticide % sprays use in under use in reduced Non-BT BT Bt Country Year First Bt Cotton mill ha Area Bt cotton USA 1996 6.2 2.0 33 5 2 60% Mexico 1996 0.08 0.028 35 4 2 50% China 1997 4.8 1.5 51 (66) 20 7-13 50% Australia 1997 0.4 0.146 36 (58) 11 6 45% Argentina 1998 0.17 0.009 5 5 2 60% S. Africa 1998 0.044 0.02 45 (85) 11 4 64% Indonesia 2001 0.022 0.004 18 9 3 66% Colombia 2002 0.041 0.004 10 6 2 66% India 2002 8.5 0.28 3 (10) 14 7 50% Bt Cotton in China % of total cotton area 70 60 50 40 30 20 10 0 1997 1998 1999 2000 % of cotton area 2001 2002 2003 2004 GM cotton worldwide in 2005 Area: 28% of global cotton is GM (9.5mill ha) (herbicide tolerant and insecticidal) Countries: 9 countries with 59% of world cotton area Farmers: c 7.2 million (>85% in developing countries – mainly China) Bt Cotton >50,000 ha Genetic system Single gene Argentina Yes Var. Yes Australia Yes Var. No 1Ac/2AB Yes China Yes Var. Yes 1Ac/(1Ab) +CpTi No Colombia No Var. Yes India Yes Hybrid Yes Indonesia No Var. Yes ? Mexico Yes Var. Yes Yes S.Africa Yes Var. Yes Yes USA Yes Var. Yes Double gene Technology fee Yes Yes (1Ac /2Ab) coming soon 1Ac+2Ab (1Ac+1Fa) No Yes Expected yield improvements with Bt crops Region Pest pressure Availability Adoption of of chemicals Chemicals Yield effect of GM crops Developed countries Low to Med High High Low Latin America (commercial) Med Med High Low to Med China Med Med High Low to Med Latin America (non-commercial) Med Low to Med Low Med to High S. and S.E.Asia High Low to Med Low to Med High Africa High Low Why?: Pest losses in non-Bt: Low USA 12%, China 15% India 60%, Uganda ???? Qaim and Zilberman - Science (299 p 901) 2003 High Target – bollworms Cry1Ac efficacy in current Bt varieties Efficacy: Spiny bollworms - Very effective (Earias sps) Pink Bollworm (Pectinophora gossypiella) Cotton bollworm (Helicoverpa armigera) Insecticide use: Global experience gives an average reduction of c.60% in insecticide applications (80% for bollworms) - Very effective - Good mid-season - Poor in late season (reduction in bio-availability of toxin) Questions? If toxin expression in Bt plants is not always sufficient to kill bollworms it will select for resistant insects. • Does Bt cotton give season-long control of caterpillars? • Are all the parts of the plant equally lethal? • Are all Bt varieties equally effective? • What is the chance of resistance to Bt developing? H. armigera larval mortality on Bt-cotton plant parts Data from an Indian variety 2003 Top leaf Middle leaf Bottom leaf Square bract Square bud 120 % Mortlaity 100 80 60 40 20 0 27 40 60 68 75 80 87 96 104 110 Days after sowing Kranthi et al 2003 116 124 133 138 152 159 Variability in expression of Cry1Ac in plant parts of commercial Indian hybrids 6 Bt Hybrids ug/gm dry wt 5 4 2-BT 20-BT 134-BT 144-BT 162-BT 184-BT 138-BT 3 2 1 0 Boll rind Boll bract loculi w all raw cotton petals sepals anthers ov ary Variability in expression of Cry1Ac in plant parts of commercial Indian hybrids Expression < 1.8ppm is not sufficient for H.armigera control 6 Bt Hybrids ug/gm dry wt 5 4 2-BT 20-BT 134-BT 144-BT 162-BT 184-BT 138-BT 3 2 _____________________________1.8ppm__ 1 0 Boll rind Boll bract loculi w all raw cotton petals sepals anthers ov ary Bt-Quant Bt-Express IS THERE RESISTANCE TO Bt COTTON? Insects resistant to sprayed Bt • 1985 : McGaughey -1st case of resistance to Bt - in Meal moth Plodia interpunctella (stock grain population) •1990 : Tabashnick et al. – Diamond back moth Plutella xylostella on cabbage in Hawaï – First case of Bt resistance in the field following intensive Bt treatments. Since then cases of resistance have been ONLY in the lab. Photo - CIRAD Bt resistance in cotton ? We have Bt resistance in the lab by : Heliothis virescens (Tobacco Bollworm) - USA Pectinophora gossypiella (Pink Bollworm) - USA Helicoverpa armigera (Cotton Bollworm) – India, China Helicoverpa armigera : (only in the lab.) • In India : Kalia et Gujar, 2004 Completely recessive Sex influenced • In Australia : Akhurst et al, 2003 Incompletely recessive Autosomal • In China : Xu et al, 2005 • In China : Liang et al, 2000 • In India : Kranthi et al. 2000 Incompletely dominant Autosomal • In Africa : Uraichuen 2002 Completely dominant, Autosomal In all that works : several cross resistances with the Cry1A family toxins In the case of Bt resistance One resistance gene with two alleles S and R SS 3 genotypes RS RR Dominance describe the RS phenotype compare to SS and RR phenotype When RS = SS Resistance is recessive When RS = RR Resistance is dominant Implications of the Indian resistance inheritance system • Survival on Mech 184 - Bt plants (75-85 days old) RR two copies of the resistant gene 75% RS one “ “ “ “ “ 33% SS no “ “ “ “ “ 5% • Inheritance - Semi-dominance (0.42 and 0.55 in two populations) Monitoring of Bt resistance Survey for the presence of the Bt resistance gene Screen for possible resistant caterpillars in the cotton This will warn us before resistance is a major problem and give us time to do something about it. Is there field resistance to Bt? (field collections of H.armigera from around the country) LC50 µgCry1Ac/ml diet Regional variability India 2001 Baseline* 2002-3 2003-4 China 1999 Baseline+ 0.01 - 0.67 0.04 - 0.38 67 fold 32 fold 10 fold 0.091 - 9.093 100 fold IC50 µgCry1Ac/ml diet Regional variability 1998 & 1999 $ 2000 $ 0.015 – 0.20 0.016 – 0.099 0.016 – 0.080 13 fold 6 fold 5 fold Answer - No definite resistance yet - but it will be difficult to detect by screening for increased survivorship. - If the truncated cadherin is the major mechanism in China and India we can now screen directly using molecular tools* *Kranthi et al 2001; +K.Wu et al 1999; * Y Wu et al. 2005; $K Wu et al 2002 Resistance gene frequency in the field (using F2 screens on field collected insects) North Centre South • • Iso-female lines Frequency of resistance alleles 180 195 210 0.0075 0.0015 0.0013 At least one resistance allele in each group Frequency is worryingly high for a semi-dominant resistance Data from K.Kranthi – pers com Resistance gene frequency calculated from offspring of field collections - China Resistance Allele Frequency Resistant Phenotype Frequency K.Wu 2002 Hebei (moths at traps) Shandong 0.001 0.0006 0.004 0.002 Y.Wu 2004 Jiangsu (Bt field survivors) 0.004-0.01 0.003 What is the Bt Resistance Mechanism in H.armigera? All from survivors in Bt fields additionally laboratory selected • Chinese H.armigera – cadherin truncation demonstrated (Wu et al 2004) • Australian H.armigera – unknown binding site mutation (Akhurst et al 2003) • Indian H.armigera – suggestions of an aminopeptidase involvement and possibly a second mechanism (Kranthi et al 2004) – – Binding affinity reduced in 6 fold in trypsin activated toxins and 10 fold in protease activated toxins Major portion of APN-1 cDNA of Cry1Ac resistant strain sequenced • • 16 base substitutions, 6 additions in 2766 nucleotides leading to 17 a.a. differences One of the these is related to glycosylation (Ser911 to Phe911) Cadherin disruption Normal cadherin Truncated cadherin Putative Bt toxin binding site Outside Membrane Inside How can we manage Resistance? IRM in the USA Refuge strategy for India 5 Rows of non-Bt around Bt cotton Influenced by USA Arbitrary Inherent weaknesses Potential strategies for conservation of susceptibility 1. Crop manipulation A=Bt cotton o Rotation: A:B:C:D:E:A:B:C…… o Alternation: AAA:BBB:CCC:DDD…. o Mosaic: A B C D A C D A B C D o Refuge: AAAA:00: AAAA:00….. 2. Conserve & encourage natural control 3. Cultural control; Biopesticides; Biological control. 4. ETL based pesticide optimization with selective Insecticides Conditions for effective refugia strategy Conditions Met in India Met in China Alleles must be recessive No Yes High toxin expression No – very variable esp No – very variable in late season esp. in late season Random mating Probably Probably - due to asynchrony between generations on different hosts No-fitness deficit No Probably not Rare resistance alleles No No Bt-Adapt* Factors affecting resistance development Data from EU China work Genetic factors: • • • • Initial resistant allele frequency Dominance Mode of inheritance Relative survival rate of RR, RS and SS genotypes on Bt and non-Bt plants • Other factors influencing Hardy-Wienberg *Kranthi K.R. and Kranthi N.R. (2004) : Modelling adaptability of cotton bollworm Helicoverpa armigera (Hubner) to Bt-cotton in India. Current Science 87(8): 1096-1107 Bt-Adapt (2) Data from published literature Ecological factors: • • • • • • Relative host oviposition preference Host plant availability in the agro-ecosystem Natural survival on the various hosts Synchrony between resistant and susceptible genotypes Relative fitness of the different genotypes on the different hosts Level and distance of in-season and between-season migration Control Factors: • Survival after insecticides on Bt and non-Bt hosts • Survival after other mortality on Bt and non-Bt hosts BT-Adapt Stochastic model in Visual Basic Recursion equations expressing net increases in population density as a function of: • Fecundity • Natural survival of life stages • Survival after insecticide • Survival after Bt exposure With survival rates of the 3 genotypes as: RR – L; RS -Lh+(1-h)K; SS – K Where h is dominance Default Parameters for ‘Bt Adapt’ India* China+ Initial frequency of resistant allele ‘R’ 0.0018 .004 - .01 (.0028) Dominance 0.42 .26 Survival of RR on Bt cotton 1.0 .9; Survival of SS on Bt cotton 0.005- 0.05 .001; .01; .05 Survival of RR on conventional cotton 0.97 .97 Emigration rate 0.5 .85 Natural survival – Egg to Larva “ “ - Larva to Adult 0.08 0.2 .08; .08; .03 .2; .12; .08 Proportion of cotton which is Bt 3% - 40% 99.9% Mortality from other pest control - Non-Bt cotton “ “ “ “ “ - Bt cotton 0.5 0.2 .85 .85 .95; 1.0 *Kranthi et al 2002, 2005 +Zhang and Tang 2002; Y.Wu et al 2005; K.Wu et al 2002 & 2003 Default parameters for H.armigera in Shandong areas in ‘000 ha Wheat Maize Cotton Soy Area in ‘000 ha First Peanut Others 40,000 Second 89 800 20 20 20 Third 4,000 800 2,400 2,400 30 Fourth 5,600 800 2,400 2,400 30 Oviposition Preference Second 0.05 0.60 0.15 0.1 0.1 Third 0.15 0.47 0.14 0.14 0.1 Fourth 0.37 0.25 0.11 0.11 0.1 Initial frequency of r allele at 1:10,000 Initial frequency of resistance allele Years to r frequency >0.5 20 Years 15 10 Actual frequency 0.01 5 0 0 0.1 0.2 0.3 Initial frequency of r allele 0.4 0.5 Dominance of resistance gene (0 - fully recessive to 1 - completely dominant) Years Years to r frequency >0.5 60 50 40 30 20 10 0 Actual r=0.26 0 0.2 0.4 0.6 0.8 Dominance of r allele 1 1.2 Ratio of maize area to cotton area Oviposition preference: Cotton 0.72 Maize 0.28 Pest control efficacy 85% in both Years to r frequency >0.5 100 Years 80 60 40 20 0 0 10 20 30 40 Ratio of Maize to Cotton area 50 Oviposition preferences on Cotton and Maize Reciprocal – total 1.0 Equal areas of Maize and Cotton. Pest control efficacy 85% in both Years Years to r frequency >0.5 35 30 25 20 15 10 5 0 Actual = 0.72 0 0.2 0.4 0.6 0.8 Ovip. preference for Cotton 1 1.2 Proportion of Cotton which is Bt Cotton Years to r frequency >0.5 100 Years 80 60 40 20 Actual c.99.9% 0 0 20 40 60 80 % of cotton which is Bt 100 120 % H.armigera control on non-Bt cotton (with 85% control of survivors of Bt cotton) Years to r frequency >0.5 100 Years 80 60 40 20 0 0 20 40 60 80 % control on non-Bt cotton 100 % H.armigera control on Bt cotton survivors Years Years to r frequency >0.5 60 50 40 30 20 10 0 Default 85% 0 20 40 60 80 % control on Bt cotton 100 120 Conclusions on relative importance of variables Effect – yrs to r >0.5 Significance Initial frequency of resistance gene •1/10,000 – 19 yrs •1/100 – 9.3 yrs Not very major Dominance of resistance •0.1 – 15.5 yrs •0.9 – 4.8 yrs Moderate Proportion of maize to cotton • 1:1 – 4 yrs •10:1 – 15.5 yrs •25:1 - 40 yrs Strong Proportion of non-Bt to Bt cotton •0.1% non-Bt – 9.3 yrs •20% non Bt - 15 yrs •50% non-Bt – 34 yrs Potentially significant Pest control in non-Bt cotton With 0.1% non-B cotton: •No control – 88 yrs •85% control – 9.3 yrs Significant Pest control in Bt-cotton With 99.9% Bt cotton: •No control – 2.8 yrs •85% control – 9.3 yrs •97% control – 55 yrs Highly significant Importance of variables Non-manageable factors: 1. 2. 3. 4. 5. Initial gene frequency Dominance, inheritance pattern etc Proportion and oviposition attractiveness of alternate hosts Relative survival of RR,RS and SS on Bt and non-Bt cotton Proportions of cotton and other hosts Possible manageable factors: 1. 2. Proportion of cotton which is Bt Mortality on non-Bt cotton Manageable factor: 1. Mortality of Bt cotton survivors The model shows removing carriers of ‘R’ alleles from the field in which they emerge to be the most efficient strategy in preserving susceptibility Practical strategies? Restrict Bt area to <40% of cotton? – No Reduce insecticide control efficacy on alternate crops?- No Manage cropping pattern to increase oviposition preference? – largely impractical Target resistant (RR and RS) genotypes? - Possibly – – – – Encouragement of bio-control Handpicking surviving larvae HaNPV –acts best on slow growing larvae Insecticides – Applied at population peaks Summary – possible pest management system in Bt cotton (insecticide only when thresholds exceeded in crop or other hosts nearby) Sucking pests Bollworms Early Window Days after sowing 1-75 1 60-75 Bio-rational Tolerant genotypes HaNPV Neem Insecticides Seed/stem neonicotinyls Endosulfan ‘Soft’ ‘Hard’ 2 75-90 Middle 3 90-110 Late 4 110-140 5 >140 Organophosphate Carbamate Pyrethroid HaNPV Spinosad Emmamectin Indoxacarb Conclusions Use of the model: • Importance of variables – esp. mortality of larvae surviving Bt cotton • Probable trends in resistance with different management practices • Identifies critical measurements needed for prediction of resistance (e.g. the relative oviposition preference of different crops at different times) Thank you for your attention INDIA Cotton situation Cotton - 8.7 mill ha - 13 % of world production - 308kg lint/ha mean yield Insecticide usage in late 1990s - 45% of all insecticides are used on cotton - 37,000 tonnes of a.i. used on cotton - 42% of cotton growing costs - 7% p.a. growth in use in the 1990s INDIA – Bt cotton Joint venture Monsanto and Maharashtra Seed Company (Mhyco) transforming local hybrids by introgression 1999 - 2002 – successful trials but no approval 2000-2001 – illegal plantings esp. in Gujarat 2002- commercialised – 38,000ha (Mech-162-Bt, Mech 194-Bt, Mech-12-Bt 2004 – Monsanto gene with 3 other companies >500,000ha (6% of crop) and 230,00 framers. Illegal area probably same. 2005 – high performing ‘legal’ material eg Rasi Seeds, and ‘illegal’ material eg Bt-Bunny and Super Bunny Performance of Bt cotton under trail conditions Organised by Company; Supervised by Government; Managed by farmers - 2001 (Qain and Zilberman 2003) • • • Maharashtra, Myda Pradesh, Tamil Nadu – 25 districts, 157 farms Each farmer 1acre Bt; one acre Bt parent; one acre popular local variety 2001 was a bad year for bollworm attack 2002 season (157 comparisons) Bt Parent of Bt Popular Check % difference Bt v. Bt parent Sucking pest sprays 3.57 3.51 3.45 +1.7% Bollworm sprays 0.62 3.68 3.43 -83% 1,501 833 802 +80% Yield (Kg/ha) +s.d. Performance of Bt cotton under Indian farming conditions 2002-2003 (Morse et al 2005) • • Maharashtra – 3 districts, 1,275 villages c.9,000 cotton plots All farmers with Bt and non-Bt plots 2002 season (7,793 plots) 2003 (1,577 plots) Non Bt Bt % difference % difference Seed cost +s.d. Rs 1,138 Rs 3,775 +232% +217% Sucking pest sprays 2.25 2.24 -0.4% +8% Bollworm sprays 3.14 1.44 -54% -77% Seed + Insecticide cost 5,060 5,804 +15% +5% Yield (Kg/ha) +s.d. 1,510+2,220 2,100+1,000 +39% +63% Revenue +s.d. Rs 31,081+49,903 Rs 42,948+20,853 +38% +63% Gross margin +s.d. Rs 25,730 +49,708 Rs 36,855+20,532 +43% +73% Performance of Bt cotton divided by district (Morse et al 2005) • • Maharashtra – 3 districts, 1,275 villages c.9,000 cotton plots All farmers with Bt and non-Bt plots Districts Yield % difference Gross Margin % difference 2002 2003 2002 2003 Khandesh +75% +84% +92% +101% Vidharba +35% +41% +37% +45% Marathwada +18% +60% +14% +68% Parts of Andhra Pradesh in 2004 had poor yields with Bt cotton – possibly varietal Conclusions from India • • Commercialisation process Government handling of approval process was poor Hybrid release - maximised IPR control and company profits but sales of F2 and F3 material has compromised efficacy and threatended susainability Efficacy • • Excellent control of pink and spiny bollworms Inadequate control of cotton bollworm in the late season Farmer suitability • Saves labour • • Yield increase 40-60% (80% in bad bollworm years (Qaim 2003) Benefit very variable with area, season and variety But • Large amounts of poor and unauthorised material • There is a continuing need for IPM training Main points Bt cotton Advantages Good control of bollworms No field resistance yet Little impact on beneficials Bollworm insecticides decline c.80% Yield rises more (<80%) in lower input situations Profitability is strongly enhanced But….. Results vary with bollworm pressure, germplasm and quality control Late season control of Helicoverpa armigera is not good Countries paying technology fees have smaller margins Having Bt in appropriate germplasm is crucial