Cell Cycle I Molecular Cell Biology November 6, 2014 Stephen Oh, M.D., Ph.D. Assistant Professor Division of Hematology Outline • Overview of the cell cycle • Cell cycle regulation – fundamental concepts • Cancer as a fundamental disruption in cell cycle regulation What is the basic function of the cell cycle? • Accurately duplicate the vast amount of DNA in chromosomes • Segregate the copies precisely into genetically identical daughter cells Figure 17-2 Molecular Biology of the Cell, 4th Edition The phases of the cell cycle • • • • G1 – gap between M and S phases S – DNA replication G2 – gap between S and M phases M - mitosis • Interphase ~23 hours • M phase ~1 hour Figure 17-3. Molecular Biology of the Cell, 4th Edition Why are gap phases needed? What critical features are needed for proper guidance through the cell cycle? Figure 17-13 Molecular Biology of the Cell, 4th Edition What critical features are needed for proper guidance through the cell cycle? Figure 17-13 Molecular Biology of the Cell, 4th Edition • A clock, or timer, that turns on each event at a specific time • A mechanism for initiating events in the correct order • A mechanism to ensure that each event is triggered only once per cycle • Binary (on/off) switches that trigger events in a complete, irreversible fashion • Backup mechanisms to ensure that the cycle can work properly even when parts of the system malfunction • Adaptability so that the system's behavior can be modified to suit specific cell types or environmental conditions The cell cycle is primarily regulated by cyclically activated protein kinases Figure 17-15, 17-16 Molecular Biology of the Cell, 4th Edition Evolution of cell cycle control: from yeast to humans Malumbres M, Nature Reviews Cancer 2009 Overview of major cyclins and Cdks of vertebrates and yeast Table 17-1. Molecular Biology of the Cell, 4th Edition Overview of major cyclins and Cdks of vertebrates and yeast Bardin AJ, Nature Rev Mol Cell Biol 2001 Cdk activity is regulated by inhibitory phosphorylation and inhibitory proteins Why is cell cycle progression governed primarily by inhibitory regulation? Figure 17-18, 17-19. Molecular Biology of the Cell, 4th Edition Cell cycle control depends on cyclical proteolysis Figure 17-20. Molecular Biology of the Cell, 4th Edition Mechanisms controlling S-phase initiation Figure 17-30. Molecular Biology of the Cell, 4th Edition DNA damage leads to cell cycle arrest in G1 Figure 17-33. Molecular Biology of the Cell, 4th Edition Overview of the cell cycle control system Figure 17-34. Molecular Biology of the Cell, 4th Edition Summary of major cell cycle regulatory proteins Table 17-2. Molecular Biology of the Cell, 4th Edition Mitogens stimulate cell division Figure 17-41. Molecular Biology of the Cell, 4th Edition Excessive stimulation of mitogenic pathways can lead to cell cycle arrest or cell death Figure 17-42. Molecular Biology of the Cell, 4th Edition Extracellular Growth Factors Stimulate Cell Growth Figure 17-44. Molecular Biology of the Cell, 4th Edition Extracellular Survival Factors Suppress Apoptosis Figure 17-47. Molecular Biology of the Cell, 4th Edition Intracellular signaling networks related to cell proliferation and cancer Hanahan and Weinberg, Cell 2011 Myeloproliferative neoplasms are clonal disorders derived from hematopoietic stem/progenitor cells JAK2 V617F Primary myelofibrosis Essential thrombocythemia Polycythemia vera JAK-STAT activation is a hallmark of myeloproliferative neoplasms TPO G-CSF JAK2 V617F P P P P JAK2 JAK2 STAT3/5 P STAT3/5 P STAT3/5 P STAT3/5 STAT3/5 P STAT3/5 Proliferation/Survival Dysregulated signaling networks in myeloproliferative neoplasms TPO G-CSF Ifna P JAK1 P P P STAT1 LNK LNK JAK2 V617F Rux JAK1 SCF FLT-3L P P JAK2 JAK2 P P P P STAT3/5 STAT1 SOCS TLRs STAT3/5 CBL RAS PI3K RAF AKT STAT1 P STAT1 P IKKγ P IKKα IKKβ P S6K ERK STAT3/5 P P MEK P TBK1 IKKε TNFα IkBα NFkB S6 P P STAT3/5 STAT1 P CREB P STAT3/5 P PIM1 BAD NFkB P IkBα IkB degradation P STAT3/5 P STAT1 P STAT1 P STAT3/5 Proliferation/Survival TNFα PIM1 P Cell cycle inhibition/Apoptosis NFkB P Proliferation/Survival TNFα, GM-CSF IkBα Spectral limitations of flow cytometry can be overcome with elemental mass cytometry Intensity >30 parameters with single cell resolution Metal conjugated antibodies Mass Labeled cells CyTOF2 mass cytometer Mass channel readout How can we visualize data in 30+ dimensions? Bendall et al Science 2011 SPADE links related cell types in a multidimensional continuum of marker expression SPADE identifies relevant cell subsets including HSPC CD15 Gran HSPC CD61 Mega CD71 CD34 median expression: Low High Ery Cell cycle analysis via mass cytometry Behbehani et al, Cytometry 2012 Cell cycle analysis via mass cytometry Behbehani et al, Cytometry 2012 Cell cycle regulators are frequently disrupted in cancer Malumbres M, Nature Reviews Cancer 2001 Overview of CDK inhibitors in clinical development for cancer therapy Results thus far have been somewhat disappointing – why? Malumbres M, Nature Reviews Cancer 2009 Suggested reading • Alberts et al., Molecular Biology of the Cell, 4th Edition, Garland. Updated 2001. Chapter 17. – http://www.ncbi.nlm.nih.gov/books/bv.fcgi?rid=mboc4.TOC&depth=2 • Malumres M, Barbacid M. Cell cycle, CDKs and cancer: a changing paradigm. Nat Rev Cancer. 2009 Mar;9(3):153-66. – http://www.nature.com/nrc/journal/v9/n3/full/nrc2602.html • Hanahan and Weinberg. Hallmarks of Cancer: The Next Generation. Cell. 2011 Mar 4;144(5):646-74. – http://www.sciencedirect.com/science/article/pii/S0092867411001279 • Anand S, Huntly BJ. Disordered signaling in myeloproliferative neoplasms. Hematol Oncol Clin North Am. 2012 Oct;26(5):1017-35. – http://www.sciencedirect.com/science/article/pii/S0889858812001281 Contact: stoh@dom.wustl.edu