LUMIER-Assays Dr. Manfred Koegl Protein Interaction Unit Genomics And Proteomics Core Facility Genomics & Proteomics Core Facilities Page 2 LUMIER assays are a reliable, cheap, high-throughput method to measure protein-protein interactions in mammalian cells. The assay tests the interaction of two proteins which are transiently expressed in mammalian cells. Like classical co-immuneprecipitations, the method is based on a co-purification protocol. Idea by Barrios-Rodiles et al., (2005) Science 307:1621-5. Dr. Manfred Koegl Genomics & Proteomics Core Facilities Page 3 LUMIER-Assays Two tagged proteins (here labelled X and Y), are transiently expressed in mammalian cells. Cells are lysed, and the first tag is used for affinity purification of protein X on magnetic beads. The second tag is a luciferase and used for detection of protein Y. IgG-coated magnetic beads Luci X Y affinity tag Dr. Manfred Koegl *”LUMIER”´, Idea by Barrios-Rodiles et al., (2005) Science 307:1621-5. Genomics & Proteomics Core Facilities Page 4 LUMIER workflow Expression constructs for protein Y (luciferase-tagged) + / - protein X (protein A-tagged) 1. Transiently transfect into HEK293 cells 2. Prepare cell lysate, split in 2 aliquots 3. Allow binding to magnetic beads 4. Wash 5. Measure luciferase activity Calculate bound luciferase relative to total luciferase Dr. Manfred Koegl Genomics & Proteomics Core Facilities Page 5 Controls sample X negative control Y Y AP1-Complex: JUN binding to FOS luciferase units (abritrary) 20000 10000 (hexuplicates +/- s.d.) 0 Dr. Manfred Koegl ProteinA-JUN ProteinA Luci-FOS Luci-FOS