Industrial Production of Enzyme Sources of enzymes Biologically active enzymes may be extracted from any living organism: Of the hundred enzymes being used industrially, - over a half are from fungi - over a third are from bacteria with the remainder divided between animal (8%) and plant (4%) sources . Sources f Enzyme Microbes are preferred to plants and animals as sources of enzymes because: - they are generally cheaper to produce. - their enzyme contents are more predictable and controllable. - plant and animal tissues contain more potentially harmful materials than microbes, including phenolic compounds (from plants). Fungal enzymes Enzyme EC Sources a-Amylase 3.2.1.1 Aspergillus E Baking Catalase 1.11.1.6 Aspergillus I Food Cellulase 3.2.1.4 E Waste Dextranase 3.2.1.11 Penicillium E Food Aspergillus I Food Lactase 3.2.1.23 Aspergillus E Dairy Lipase 3.1.1.3 Rhizopus E Food Rennet 3.4.23.6 Mucor miehei E Cheese Pectinase 3.2.1.15 Aspergillus E Drinks Protease 3.4.23.6 Aspergillus E Baking Glucose oxidase 1.1.3.4 Trichoderma Application E: extracellular enzyme; I: intracellular enzyme Bacterial enzymes Enzyme Sources a-Amylase b-Amylase 3.2.1.1 3.2.1.2 Asparaginase 3.5.1.1 Glucose isomerase Penicillin amidase Protease Application Bacillus Bacillus Escherichia coli E E Starch Starch I Health 5.3.1.5 Bacillus I 3.5.1.11 Bacillus I 3.4.21.14 Bacillus E Fructose syrup Pharmace utical Detergent PROCEDURES The screening procedure for commercial enzymes is to screen ideas: - to determine the potential commercial need for a new enzyme. - to estimate the size of the market and to decide how much potential users of the enzyme will be able to afford to pay for it. E.g. entirely novel substance, or to improve a process agreement, discussions with potential users Procedures Location of a sources of enzyme -use all available databases to search for mention of the enzyme in the academic and patents literature. -screen for new microbial strains Procedures Determination of the Properties of Enzyme - temperature for optimum productivity and stability - pH optimum and stability - kinetic constants (Km, Vmax) - whether there is substrate or product inhibition - the ability to withstand components of the expected feedstock other than substrate. - select a reactor Procedures Determination of the acceptability of Enzyme Various decisions must be made concerning the acceptability of the organism to the regulatory authorities: -the productivity of the organism. -the way in which the enzyme is to be isolated, utilised (free or immobilised) and, if necessary, purified. If the organism is unacceptable from a regulatory viewpoint two options exist; - to eliminate that organism & continue the screening operation. - to use recombinant DNA technology. Procedures Scale up of Production The selected strain(s) of microbe will be grown in pilot plant conditions. - achieve accurate costing of processes. -reveal imperfections, or at least areas of ignorance which must be corrected at the laboratory scale. -produce samples of the enzyme preparation to be used by customers. -produces samples for safety and toxicological studies. Protect intellectual property generated by patenting the enzyme or its production method or the process. Determination of Enzyme Activity Specific activity: the number of units of enzyme activity per amount of total protein. Unit: the amount of enzyme that gives a predetermined amount of catalytic activity under specific conditions. Determination of Enzyme Activity To measure the amount of glucoamylase in a crude enzyme preparation, 1 ml of the crude enzyme preparation containing 8 mg protein is added to 9 ml of a 4.44% Lintner starch solution. One unit of activity of glucoamylase is defined as the amount of enzyme which produces a µmol of glucose per min in a 4% solution of starch at pH 4.5 and at 60oC. Initial rate experiments show that the reaction produces 0.6 µmol of glucose/ml-min. What is the specific activity of the crude enzyme preparation? Determination of Enzyme Activity To determine the total amount of glucose produced: 10 ml X 0.6 µmol of glucose/ml-min = 6 µmol of glucose/min = 6 units of activity The specific activity is: 6 units of activity / total protein added = 6 units of activity / (1ml protein solution X8 mg protein/ml) = 0.75 units/mg protein Cost of purification The effect of number of steps on the yield and costs in a typical enzyme purification process. Specific activity Total cost Cost per weight Cost per activity 1 1.00 1 1.00 1 3 1.10 4 1.47 2 9 1.20 19 2.13 3 27 1.30 83 3.08 4 81 1.40 358 4.92 5 243 1.50 1536 6.32 Step Enzyme Production at a Large Scale • Hydrolase: proteases, pectinase, lipase, lactase • Isomerases: glucose isomerase • Oxidases: glucose oxidase • Transferases: Rhodanase Application of Industrial Enzyme • Food industrial: Starch saccharification: amylase cheese: rennase cleaves the principal protein of milk and causes milk to curdle and aids digestion. Bread : amylase, protease, hemicellulases. Fruit juice: pectinases to degrade pectins in cell walls of fruits and vegetables Beer: amylase, acetolactate decarboxylase. Detergent Constituent Composition (%) Sodium tripolyphosphate (water softener, loosens dirt)a 38.0 Sodium alkane sulphonate (surfactant) 25.0 Sodium perborate tetrahydrate (oxidising agent) 25.0 Soap (sodium alkane carboxylates) 3.0 Sodium sulphate (filler, water softener) 2.5 Sodium carboxymethyl cellulose (dirt-suspending agent) 1.6 Sodium metasilicate (binder, loosens dirt) 1.0 Bacillus protease (3% active) 0.8 Fluorescent brighteners 0.3 Foam-controlling agents Trace Perfume Trace Water to 100% Medical Application Enzyme EC number Use Asparaginase 3.5.1.1 Leukemia Collagenase 3.4.24.3 Skin ulcers Glutaminase 3.5.1.2 Leukemia Lysozyme 3.2.1.17 Antibiotic Ribonuclease 3.1.26.4 Antiviral b-Lactamase 3.5.2.6 Penicillin allergy 3.4.21.31 Blood clots Rhodanase 2.8.1.1 Cyanide poisoning Uricase 1.7.3.3 Gout Urokinase Summary of Enzyme • Enzyme classification • Enzyme have common catalytical features - decrease the reaction activation energy - does not affect equilibrium • Enzyme special catalytic features - Efficient - Specific - regulated - versatile Summary of Simple Saturation Kinetics • Michaelis-Menten Approach • Briggs-Haldane Approach • Use these two approaches to derive enzyme catalytic reaction. • Use experimental data to obtain parameters of Michaelis-Menten kinetics. V= K5[ES]2 K5 V= Estimation of inhibited enzyme kinetics • Determine the type of inhibition. • Determine the parameters for MichaelisMenten equation without inhibition. • Determine the parameter of KI for inhibited kinetics. Substrate inhibition ' K )1/ 2 [S ]max (K m SI Summary of Inhibited Kinetics • For reversible enzyme inhibition, there are - competitive - noncompetitive - uncompetitive - substrate inhibition • Determine parameters for all these types of inhibition kinetics. Estimation of inhibited enzyme kinetics Substrate inhibition ' K )1/ 2 [S ]max (K m SI 0.14 0.12 1/v 0.1 0.08 0.06 0.04 0.02 0 0 50000 100000 1/[s] 150000 Summary of Immobilization Methods Methods of Enzyme immobilization: - Entrapment - matrix - membrane (microencapsulation) - Surface immobilization - physical adsorption - ionic binding - covalent binding - Cross-linking Summary of Diffusion Effects in Immobilized Enzyme System - Determine the support to be non-porous or porous. - Identify the substrate determining the reaction rate. - Conduct mass balance of the substrate of interest. Accumulation of substrate of interest = rate of substrate gain - substrate consumption rate (production formation rate, or reaction rate) At steady state, Rate of substrate gain = substrate consumption rate Summary of Diffusion Effects In surface-bound enzymes on nonporous support materials. Consider external diffusion rate (liquid film mass transfer rate) At steady state, the reaction rate per unit surface area is equal to the rate of net substrate gain in regard to the external diffusion. E+S k2 ES P E Diffusion effects in surface-bound enzymes on nonporous support materials. At steady state, the reaction rate is equal to the external diffusion rate: Vm '[ S s ] J s k L ([ Sb ] [ S s ]) K m [S s ] With the equation and known Sb, KL, Vm’ or Km, to determine numerically or graphically: - The substrate concentration at the surface. - The reaction rate. J s kL ([Sb ] [Ss ]) Graphical solution for reaction rate per unit of surface area for enzyme immobilized on a non-porous support Diffusion effects in surface-bound enzymes on nonporous support materials. To increase the overall reaction rate with external diffusion limitation Vm ' maximum rate of reaction Da maximum rate of diffusion k L [ Sb ] -Increase the bulk concentration of substrate. -Increase the liquid film mass transfer coefficient kL. Summary of Diffusion Effects In surface-bound enzymes on porous support materials. Consider intraparticle diffusion rate. At steady state, the reaction rate per unit volume is equal to the rate of net substrate gain in regard to the intraparticle diffusion. is the effectiveness factor. reactionrate with intraparticlediffusion limitation reactionrate without diffusion limitation. f (, b ) R Km b [S s ] " Vm S s De 1 1 the rate is diffusion limited. the rate is reaction limited. β η Ф η At specific conditions (T, P) for a fixed system, To increase the intra-particle mass transfer rate: - Decrease the size of immobilized enzyme particle - Increase the substrate concentration - Increase the porosity or specific surface area of the particle Electrostatic and Steric Effects in Immobilized Enzyme Systems - The optimum pH for immobilized enzyme system will shift from that of soluble free enzyme Electrostatic effect - The activity of enzyme toward a high-moleculeweight substrate may be reduced. Steric hindrance