Unit 4: Cell Communication and Cell Cycle What’s the big deal? Cells must use energy and information transmission to communicate and replicate Pages 1-3 are meant to help highlight the important information included in each unit. While this can be a major source of information, make sure to use any/all studying tools available to you (ie class notes, textbook, videos, supplemental study books, etc.) Please note that while the College Board lays out the topics in this order, the class may go through the topics in a different order or combine similar topics. Topic 1: Cell Communication Learning Objective IST-3.A: Describe the ways that cells can communicate with one another. IST-3.B: Explain how cells communicate with one another over short and long distances. Essential Knowledge IST-3.A.1: Cells communicate with one another through direct contact with other cells or from a distance via chemical signaling— a. Cells communicate by cell-to-cell contact IST-3.B.1: Cells communicate over short distances by using local regulators that target cells in the vicinity of the signal-emitting cell— a. Signals released by one cell type can travel long distances to target cells of another cell type. Vocabulary/Review Questions Direct contact Gap junctions Plasmodesmata hormones 1. Fill in the blanks: In direct contact communication, animal cells communicate through _______ junctions and plant cells communicate through _________. 2. What do animals and plants use for long distance signaling? Differentiate between animals and plants when they use this to communicate. 3. Differentiate between paracrine signaling and synaptic signaling. 4. True or false: insulin signaling is an example of local signaling. Topic 2: Introduction to Signal Transduction © Getting Down With Science 2020 Learning Objective IST-3.C: Describe the components of a signal transduction pathway. IST-3.D: Describe the role of components of a signal transduction pathway in producing a cellular response. Essential Knowledge IST-3.C.1: Signal transduction pathways link signal reception with cellular responses. IST-3.C.2: Many signal transduction pathways include protein modification and phosphorylation cascades. IST-3.D.1: Signaling begins with the recognition of a chemical messenger—a ligand—by a receptor protein in a target cell— a. The ligand-binding domain of a receptor recognizes a specific chemical messenger, which can be a peptide, a small chemical, or protein, in a specific one-to-one relationship. b. G protein-coupled receptors are an example of a receptor protein in eukaryotes. IST-3.D.2: Signaling cascades relay signals from receptors to cell targets, often amplifying the incoming signals, resulting in the appropriate responses by the cell, which could include cell growth, secretion of molecules, or gene expression— a. After the ligand binds, the intracellular domain of a receptor protein changes shape, initiating transduction of the signal. b. Second messengers (such as cyclic AMP) are molecules that relay and amplify the intracellular signal. c. Binding of ligand-to-ligand-gated channels can cause the channel to open or close. Vocabulary/Review Questions Reception Transduction Second messengers Protein phosphatase GPCR cAMP Receptor Ligand Ligand-gated Protein kinase ion channel Response 1. Summarize the three stages of cell signaling in one sentence each. 2. If you were given a problem on the AP exam that described a water-soluble (polar) receptor, where would it be located in the cell? 3. Receptors that bind to estrogen, a hormone would be found where in the cell? 4. What do second messengers do, and why is this role so important in some cells? 5. Differentiate between the role of protein kinase and protein phosphatase in cells. 6. What does the term “signal” refer to in a signal transduction cascade? 7. Neurons can participate in both local and long distance signaling. How is this possible? (you may do research online to help answer this question if needed) 8. How are signals passed from outside of the cell to inside of the cell? 1 Topic 3: Signal Transduction Learning Objective IST-3.E: Describe the role of the environment in eliciting a cellular response. IST-3.F: Describe the different types of cellular responses elicited by a signal transduction pathway. Essential Knowledge IST-3.E.1: Signal transduction pathways influence how the cell responds to its environment. IST-3.F.1: Signal transduction may result in changes in gene expression and cell function, which may alter phenotype or result in programmed cell death (apoptosis). 1. 2. 3. 4. 5. Vocabulary/Review Questions Describe the “response” that a cell can have to a signal. How is it possible that a single signal molecule can elicit massive cellular responses? What is transcription and translation (as it pertains to DNA)? True or false: the final molecule in a signal transduction pathway can act as a transcription factor, meaning that it can turn genes off or on. What does it mean if a gene is turned off vs on?. Topic 4: Changes in Signal Transduction Pathways Learning Objective IST-3.G: Explain how a change in the structure of any signaling molecule affects the activity of the signaling pathway 2. 3. 4. © Getting Down With Science 2020 Essential Knowledge IST-3.G.1: Changes in signal transduction pathways can alter cellular response— a. Mutations in any domain of the receptor protein or in any component of the signaling pathway may affect the downstream components by altering the subsequent transduction of the signal. IST-3.G.2: Chemicals that interfere with any component of the signaling pathway may activate or inhibit the pathway. 1. Vocabulary/Review Questions What would happen to the signal transduction pathway if protein phosphatase was mutated? What would happen to the signal transduction pathway if protein kinase was mutated? If a receptor protein is mutated, can it receive a ligand? Why or why not? How can chemicals activate or inhibit a pathway? (i.e what does “activate” mean and what does “inhibit” mean in terms of a signaling cascade?) 2 Topics 1, 2, 3, and 4 Cell Communication Cell-to-cell communication is critical for the ___________________ and _____________________ of cells. Responsible for: How Do Cells Communicate? Cells communicate through three general ways 1. 2. 3. Direct Contact Direct contact: Signaling substances and other material dissolved in the cytoplasm can pass ___________________ between ______________________ cells. Animal cells: Plant cells: © Getting Down With Science 2020 Example: Immune cells ➔ Questions? ➔ Textbook chapters/pages to review 4 Local Regulators Local regulators: The chemical messages will cause a ______________________ in a ______________________ cell. Examples: Paracrine signaling: © Getting Down With Science 2020 Synaptic signaling: ➔ Questions? ➔ Textbook chapters/pages to review 5 Long Distance Signaling Animals and plants use ___________________________ for long distance signaling. Plants: Animals: Example: Insulin Quick Check: 1. What type of communication involves a cell secreting a substance to an adjacent target cell? © Getting Down With Science 2020 2. Plant cells in direct contact with each other can diffuse substances through these structures to communicate. What are they? ➔ Questions? ➔ Textbook chapters/pages to review 6 Practice Problems: Modes of Cell Communication Directions: Identify the type of signaling that each example best represents: direct contact (via gap junctions or plasmodesmata), local signaling (paracrine or synaptic), or long-distance signaling . 1. Embryonic stem cells are of great interest to researchers as they are pluripotent, meaning they can become many different cell types as they grow and differentiate. So how do embryonic stem cells “know” what cell to become? Researchers have discovered embryonic stem cell markers, which are molecules expressed on the surface of the cells that interact and signal to adjacent cells through channels comprised of the protein connexin. 2. The thyroid is a butterfly shaped gland located on the front side of the neck. The thyroid produces three main hormones: triiodothyronine, tetraiodothyronine, and calcitonin. These thyroid hormones can generate signaling pathways that lead to the cell proliferation and regulation of metabolic activity. 3. Meningothelial cells (MECs) play a vital role in regulating homeostasis of spinal fluid. MECs are connected via tight junctions, gap junctions, and aquaporins in order to communicate with adjacent cells. 4. During physical activity, heart rate increases. Endothelial cells in the body sense the increased heart rate and release nitric oxide. Nitric oxide relaxes nearby smooth muscle, which means blood vessels expand allowing for increased blood flow through the body. 5. In order for a muscle contraction to occur, nerve cells must signal to muscle cells. Motor nerves that signal to skeletal muscles release acetylcholine, which will bind to nicotinic acetylcholine receptors on skeletal muscles and cause a contraction. © Getting Down With Science 2020 6. Auxins are a group of plant hormones that play vital roles in mediating growth and development. Auxin is transported through plant tissue by passive diffusion. A recent study revealed that as the root tips of plants grow, there is an influx of auxin. The researchers genetically modified root cells to lack plasmodesmata and exposed the root cells to auxin; the roots did not grow. Therefore, they concluded that auxin must travel through plasmodesmata to allow for root tip growth. 7. During the wound healing process, cells in the damaged area release the growth factor EGF. EGF signals to surrounding cells to grow, proliferate, and differentiate. ➔ Questions? ➔ Textbook chapters/pages to review 7 Think, Pair, Share How do you think cells process signals? Write your ideas down in the space below. Cell Signaling:Overview Cell-to-cell messages can be divided into three stages: 1. 2. © Getting Down With Science 2020 3. On the following pages these stages will be covered in more detail ➔ Questions? ➔ Textbook chapters/pages to review 8 Stage 1: Reception Reception: Receptor: ● All receptors have an area that ____________________ with the ligand and an area that _________________ a signal to another protein ○ Binding between ________________ and _________________________ is highly __________________. When the ligand binds to the receptor, the receptor ___________________________ (via a __________________________ change). Allows the receptor to: Initiates ____________________________________________ Receptors can be in the ____________________________________________ or © Getting Down With Science 2020 ________________________________. ➔ Questions? ➔ Textbook chapters/pages to review 9 Plasma Membrane Receptors Intracellular Receptors © Getting Down With Science 2020 Note: the AP exam will not expect you to be able to classify any given molecule as hydrophobic, usually they will either tell you it is hydrophobic, or they will say the molecule is a steroid hormone. ➔ Questions? ➔ Textbook chapters/pages to review 10 Stage 2: Transduction Transduction: Requires: The signal transduction pathway regulates _________________ activity through: *Remember: a change in shape means During transduction the signal is _______________________________. © Getting Down With Science 2020 Second messengers: ➔ Questions? ➔ Textbook chapters/pages to review 11 Stage 3: Response Response: Examples: A. B. C. © Getting Down With Science 2020 Quick Review 1. What are the three stages of cell signaling? 2. What is the actual “signal” being transduced in a signal transduction pathway? 3. How is this “signal” passed from outside to inside the cell? ➔ Questions? ➔ Textbook chapters/pages to review 12 Signal Transduction Pathways Signal transduction pathways can influence: They can result in changes in: Changes in Signal Transduction Pathways Practice FRQ Some diseases, such as cancer or diabetes, are caused by defective protein phosphatases. Explain how such a defective protein would affect a signal transduction pathway. _______________________________________________________________________________________ _______________________________________________________________________________________ _______________________________________________________________________________________ _______________________________________________________________________________________ _______________________________________________________________________________________ _______________________________________________________________________________________ _______________________________________________________________________________________ _______________________________________________________________________________________ _______________________________________________________________________________________ © Getting Down With Science 2020 _______________________________________________________________________________________ _______________________________________________________________________________________ _______________________________________________________________________________________ ➔ Questions? ➔ Textbook chapters/pages to review 13 Review: Cell Communication 1. What are the three main ways that cells communicate? 2. Classify the images below by their type of communication © Getting Down With Science 2020 3. Ligand-receptor binding is highly specific. What does this mean? 4. Compare direct contact communication in animal cells and plant cells. 14 5. Label the 3 stages of signal transduction using the image below. 6. In the first stage of cell signaling, a _______________ binds to a __________________, which can either be in the plasma membrane or ____________________. 7. In the second stage of cell signaling, the signal is converted and it will bring about a ______________ ________________. 8. Differentiate between the roles of protein kinases and protein phosphatases in the second stage of © Getting Down With Science 2020 signaling pathways. 9. In the third stage of cell signaling, the final molecule in the signaling pathway will convert the signal to a response that will alter a(n) __________________ ______________________. 15 Important Receptors In eukaryotic organisms there are two main categories of cell membrane receptors: 1. 2. GPCRs G protein coupled receptors (GPCRs): The GPCR, enzyme, and G protein are inactive until ligand binding to GPCR on the extracellular side Ligand binding causes ______________________ side to change shape © Getting Down With Science 2020 Part of the activated G protein can then bind to the enzyme. ➔ Questions? ➔ Textbook chapters/pages to review 16 Ion Channels Ligand gated ion channels: Located: Important in the: Receptors that act as a __________________ for ions © Getting Down With Science 2020 ➔ Use this space to reflect on topics 1, 2, 3, and 4 ➔ Textbook chapters/pages to review 17 The Secret Life of Plants Look at the picture of the potted house plant to the right. What do you think when you see it? Do you think that this plant can express itself? Can it communicate with other species? Now look at the picture of the tree to the left. Do you think the tree understands its surroundings? Can it communicate with nearby trees if there is danger? Well, it turns out that all the above are true! Most people don’t realize that plants have fine-tuned mechanisms of communication, and it turns out scientists didn’t know either until only recently! Two studies published in 1983 demonstrated that willow trees, poplars, and sugar maples can warn each other about insect attacks. Scientists found that intact, undamaged trees near ones that are infested with hungry bugs begin pumping out bug-repelling chemicals to ward off attack. In 2006, studies done on plants found that they have a two branched innate immune system to protect themselves from bacterial, viral, and fungal infections. So how do exactly can plants do this? Well, they use signaling cascades! A Call for Nutrients Trees, like redwoods, can grow to be massive structures reaching over 300 feet in height! A forest full of these skyscraper trees would naturally draw your attention upwards toward the sky to marvel at their beauty. But it turns out that there are even more massive and complex structures under your own feet! Most people know that the roots of trees extend deep into the ground, where they take up nutrients and water, but there is also a full network of fungal fibers underneath the soil that interact with the roots of trees. These fungal fibers are known as mycorrhizal networks. Mycorrhizal networks are so immense and complex in forest biomes that they have been dubbed “The Wood Wide Web.” These fungal networks have a symbiotic relationship with 80% of all plants. In forest biomes, the fungi take about 30% of the sugar the trees produce by photosynthesis for their own use. In exchange the fungus grows and spreads deep into the surrounding soil to find nutrients and water, which it then pumps to trees in need. So, what does a new tree (sapling) do in order to gain access to this fungal network? The sapling releases strigolactones. Strigolactone is a hormone that can be recognized by mycorrhizal fungi in the soil and allows the fungi to “detect” the host plant. When the mycorrhizal fungi receives the strigolactones, it creates a signaling cascade that results in fungal growth. This pathway can be seen in Figure 1. © Getting Down With Science 2020 Use Figure 1 to answer questions 1-4. Fig. 1 Strigolactone Signaling in Fungal Cells 18 1. On Figure 1, label the three stages of cell signaling. 2. Classify strigolactone as polar (hydrophilic) or non-polar (hydrophobic). How can you tell by examining Fig. 1? 3. How are messages relayed in cells? How are they amplified? 4. What is the fungal cell’s response to the message received? A Warning Signal Besides communicating through fungal networks, plants can also communicate by releasing chemicals in the air. The thorn acacia in sub-Saharan Africa is an excellent example of how plants can warn other nearby plants of threats. When a giraffe begins to chew acacia leaves, the tree notices the injury and emits a distress signal in the form of ethylene gas. This gas is released into the air and can travel up to 50 yards. Upon detecting this gas, neighboring acacias start releasing tannins into their leaves. In large enough quantities tannins can sicken or even kill large herbivores. Giraffes are one such herbivore that commonly feed on acacia trees. So how are giraffes able to eat the acacia tree leaves? Giraffes can detect ethylene gas in the air, which is why when giraffes feed on the acacia tree they do so into the wind, so the warning gas doesn’t reach the trees ahead of them. If there’s no wind, a giraffe will typically walk 100 yards— farther than ethylene gas can travel in still air—before feeding on the next acacia. The figure below represents ethylene signaling in acacia trees. © Getting Down With Science 2020 Use Figure 2 to answer questions 5-10 Fig. 2 Communication Via Ethylene Gas 19 5. Where is the receptor located that binds to ethylene? 6. Before the acacia tree receives ethylene, is it producing tannins? Why or why not? 7. When ethylene binds to the receptor, what happens to the repressor bound to the transcription factor? 8. What happens to the transcription factor? What does this allow for? © Getting Down With Science 2020 9. What is being produced inside the cell now? 10. How is what is being produced leaving the cell? 20