PCZO100-LT112324-DGPAHAYO MODULE 3 – Cell Division and Genetics Cell Cycle cyclical process of growth and mitosis Consists of interphase and mitosis Checkpoints before mitosis Terminologies/notes Heterologue - chromatins are contributed from 2 different parents. Homologue -chromatins that contain the same genetic materials. Gametes - sex cells Humans contain 23 pairs of chromosomes with a total of 46 individual chromosomes. Female chromosome – XX Male chromosome – XY Genetic disorders that result from uncontrolled division – Down syndrome Interphase Stage between cell division Occupies about 90% of the total cell cycle. The process wherein the cells duplicate themselves. The chromosomes appear irregular – granular form and are maintained as chromatin fibers. Normal activities of the cell during interphase: o Metabolism o Cellular respiration o Protein synthesis o Lipid synthesis Divided into subphases. o G1 phase early growth phase Cell continues to grow in volume. o S phase Synthesis phase Involved DNA replication. o G2 period Prepares for cell division. Replication of mitochondria Synthesis of microtubules Chromosome condensation G1 phase – 1st checkpoint o Checking the materials are complete and if there are any errors in the cell. Apoptosis – programmed cell death or g0 phase also known as resting phase. nd G2 phase – 2 checkpoint o Checking for replication error o Checking if there are enough organelles before cell division. o If there are mitotic spindles available Metaphase – 3rd checkpoint o Check whether the spindle fibers are properly attached to the centromeres. Mitosis Only applies to somatic cells. The goal is to produce 2 identical daughter cells. o Also called duplication division o For growth and development and replacements for old cells. Refers to the division of the nucleus (karyokinesis) Division of the cytoplasm (cytokinesis) Consists of 4 phases o Prophase o Metaphase o Anaphase o Telophase Prophase Each chromosome consists of 2 chromatins that are joined at the centromere. Centrioles move to the opposite ends of the cell. Nucleus and nuclear envelope start to dissolve. Mitotic apparatus is nearly formed. (Asters and spindle fibers) = Metaphase PCZO100-LT112324-DGPAHAYO MODULE 3 – Cell Division and Genetics Mitotic spindles are now full formed. The chromosomes align at the metaphase plate. Anaphase The phase of migration Chromatids separate to form two sets of identical chromosomes. Cytokinesis begins. o Plant cells – cell plate o Animal cell – cleavage furrow Telophase the phase of reconstruction chromosome uncoils. o Chromatins recondenses. Nucleus develops. Spindles disappear. Formation of 2 new daughter cells with 23 pairs of chromosomes each. Ploidy level – diploid o Formula: 2n = 23 Meiosis Produces 4 daughter cells with the haploid number of chromosomes as parent cells. Also called reduction division o Reducing ploidy level from 2n -> n Involves meiosis I and II Formula = n = 23 Meiosis I Results in reducing the number of chromosomes. Accompanied by cytokinesis. o Prophase I Crossing-over – process wherein the chromatids exchange segments and transfer genes. Chiasma – site of crossing over. Chiasmata – overlapping region during crossing over. Metaphase I o Separates chromosomes (tetrads) and places them in the metaphase plate. o Produces diversity in the 2 gametes. Anaphase I o The chromosomes are separate pulling to either region of the cell Telophase I o The chromosomes arrive at the pole of the cell o Each pole has a haploid chromosome cell Meiosis II Prophase II – spindle fibers form Metaphase II – Line up at the metaphase plate Anaphase II – Separate the chromosomes. Telophase II – nuclei form at the poles Cytokinesis occurs. 23 individual chromosomes from the sperm 23 individual chromosomes from the egg 2 haploids = diploid PCZO100-LT112324-DGPAHAYO MODULE 3 – Cell Division and Genetics o Eukaryotic Chromosomes Eukaryotic chromosomes are composed of chromatin. Chromatin is the aggregate mass of DNA and histone proteins. Karyogram– graph that shows chromosomes. Organization of a chromosome 1. The supercoiling of chromatin within the chromosome. a. Supercoiling is the processing of folding chromatins to become a chromosome. 2. Folding within the supercoil 3. An individual fiber in the supercoil consists of a nucleosome: a DNA strand coiled around histones like beads on a string. 4. Linker proteins anchor DNA to the core and wind the chain in to a cylinder. DNA Sex chromosomes (XY and XX) differ in males and females, and function in sex determination. Autosomes are not involved in sex determination. Number of chromosomes The number of chromosomes is constant within species. but chromosome numbers vary among different species. N identifies the number of different kinds of chromosomes o Diploid (2N) – 2 sets of chromosomes o Haploid – 1 set of chromosomes o Polyploid – more than 2 sets of chromosomes Polyploidy – changes in the entire sets of chromosome DNA (deoxyribonucleic acid) as the candidate Able to code for the sequence of amino acids in proteins a control protein synthesis. Able to replicate itself prior to cell division. Contained in the nuclei of eukaryotic cells. Able to change over time to account for evolutionary change. Enzymes involved in DNA synthesis Sex Chromosome and autosome Aneuploid – occurs due to nondisjunction Trysomy – adds 1 chromosome Monosomy – decreases 1 chromosome Chromosome 21 mostly affected sa trysomy Helicase – protein unwind DNA strands from double-helix. Single-strand binding protein – stabilizes DNA strand after being unwound by the helicase DNA polymerase – creates a copy Structure of DNA Double helix With major and minor grooves Complete spiral every 10 base pairs Antiparallel: 3-5 and 5-3 The structure of DNA 1. Nucleotide = nitrogenous base with a backbone of deoxyribose sugar and phosphate groups. 2. Base-pairing o Adenine – thymine o Cytosine – guanine These nucleotides are coiled along histones, then are supercoiled to produce chromosomes. 3. Bases o Purine (2 rings): A, G o Pyrimidine (1 ring): C,T PCZO100-LT112324-DGPAHAYO MODULE 3 – Cell Division and Genetics o Hydrogen Bonding of bases 2. 3. 4. Dipole-dipole DNA replication process 1. Helicases unwind the parental double helix. 2. Single-strand binding proteins stabilize the unwound parental DNA. 3. DNA polymerase synthesizes The leading strand continuously in the 5 -> 3 directions. 4. The lagging strand is synthesized discontinuously. a. Primase synthesizes a short RNA primer, which DNA polymerase extends to form an Okazaki fragment. 5. After the RNA primer is replaced by DNA, DNA ligase joins the Okazaki fragment to the growing strand. Gene to Protein Gene – a DNA sequence that codes for one polypeptide or a trait Genetic Information is transmitted from the nucleus to the cytoplasm where the protein synthesis occurs. 5. 6. Translation: mRNA – protein Transcription: DNA - mRNA The process by which DNA is transcribed to mRNA. Generally, the same process as DNA synthesis but with a transcription synthesizes ribose nucleic acid (RNA) o Uracil instead of thymine 1. Involves an enzyme called RNA polymerase with the help of the protein transcription factors RNA polymerase separates DNA at a sequence called the promoter. DNA strands separate temporarily into Template strand (antisense strand) – will be used to generate mRNA. Non-template strand (sense strand) RNA polymerase adds RNA nucleotides to the DNA template. Elongation - the process in which RNA polymerase travels along the template strand. During this process, the rna polymerase base zips back up, keeping only 10-20 base pairs open. Termination – process is done, DNA zips back up. After the process, it will produce mRNA and it will travel to the cytoplasm, particularly in a ribosome where translation will begin. The process by which messenger RNA (mRNA) is translated into proteins. Codons – set of 3 bases in the mRNA, codes for the anticodon that is carried by transfer RNA ( tRNA) The mRNA carries a code of the specific gene, tRNA converts codon information into amino acid sequence. o catalyzed by rRNA. mRNAs are single-stranded RNA molecules. They are copied from the TEMPLATE strand of the gene, to give the SENSE strand in RNA o Each tRNA is attached to a specific amino acid Reading Frame – the arrangement of nucleotides into the codons o 4 possible bases o 3 letters per codon o Which gives 64 possible codons SPECIAL CODONS: o AUG methionine – start codon. o UAA, UAG, UGA – stop codons PCZO100-LT112324-DGPAHAYO MODULE 3 – Cell Division and Genetics Translation process: 1. Start in the small ribosomal subunit that will bind to an mRNA and initiator tRNA 2. Large ribosomal unit joins to complete the translation initiation complex 3. tRNA that corresponds to the codon with enter the ribosome and carries an amino acid. It becomes covalently bound to the methionine. 4. 1st tRNA leaves and shifts over and the process continues until it reaches a stop codon. 5. The completed polypeptide swims away for folding. Genotype – genetic composition Phenotype – visual expression of the genotype Dominant Allele – Hides the expression of another allele. Recessive allele – expression is masked another allele. Heterozygous – two different alleles of the gene occupy the loci of homologous chromosome. Homozygous – two identical alleles of the gene occupy the loci homologous chromosome. Principle of Segregation The Genetic Code Pairs of genes are distributed between gametes during gamete formation when homologous chromosomes are distributed to different gametes during meiosis. Inheritance Patters In Animals A gene or a DNA sequence coding for a trait is located at a specific locus or site in the chromosome. Different alleles of the gene occupy the same locus. Terminologies Trait – a characteristic brought by the expression of a gene Alleles – alternative forms of a gene o Multiple Alleles – when more than a pair of alleles control a trait Codominant – different alleles are both expressed in a heterozygote. Incomplete dominance – when one allele is not completely dominant over another. Law of segregation: Principle of Independent Assortment During Meiosis, pairs of genes segregate independently of one another. PCZO100-LT112324-DGPAHAYO MODULE 3 – Cell Division and Genetics The distribution of genes for one trait is not influenced by the genes for another trait. Punnett Square