AP Biology Mrs. Ward’s Class UNIT 3 STUDY GUIDE This unit is 12-16% of the AP Exam. The content on enzymes is the foundation for many concepts we will learn in this course. If you don’t have a good understanding of the concepts in this unit, you may have significant challenges in later units. Chapter 6: An Introduction to Metabolism Vocabulary: activation energy active site allosteric regulation anabolic pathway catabolic pathway catalyst chemical energy coenzyme cofactor competitive inhibitor cooperativity endergonic reaction enzyme enzyme-substrate complex exergonic reaction feedback inhibition free energy induced fit metabolic pathway metabolism non-competitive inhibitor substrate Learning Objectives: Metabolism, Energy, and Life Explain the role of catabolic and anabolic pathways in cellular metabolism. Distinguish between exergonic and endergonic reactions. Enzymes Describe the function of enzymes in biological systems. Explain how enzyme structure determines enzyme specificity. Explain the induced-fit model of enzyme function Describe the catalytic cycle of an enzyme. Explain how substrate concentration affects the rate of an enzyme-catalyzed reaction. Describe the influence of cofactors and coenzymes on enzyme activity. Explain why the three-dimensional structure of an enzyme is the key to its activity, and the role that temperature, pH, and inhibitors play in altering enzyme activity. The Control of Metabolism Explain how metabolic pathways are regulated. Describe how allosteric regulators may inhibit or stimulate the activity of an enzyme. Explain how feedback inhibition prevents a cell from wasting chemical resources. Describe how localization of enzymes within a cell may help order metabolism. Chapter 7: Cellular Respiration & Fermentation Vocabulary: acetyl CoA aerobic alcohol fermentation anaerobic ATP synthase cellular respiration chemiosmosis citric acid cycle electron transport chain FAD/FADH2 fermentation glycolysis lactic acid fermentation NAD+/NADH oxidation oxidative phosphorylation oxidizing agent redox reaction reducing agent reduction substrate-level phosphorylation AP Biology Mrs. Ward’s Class Learning Objectives: Principles of Energy Harvest Distinguish between fermentation and cellular respiration. Write the chemical equation for cellular respiration. Explain how ATP is recycled in cells. Define oxidation and reduction. Explain how redox reactions are involved in energy exchanges. Describe the role of NADH and FADH2 in the electron transport chain during respiration. The Process of Cellular Respiration Describe the cellular regions where glycolysis, the Krebs cycle, and the electron transport chain occur. Describe how the carbon skeleton of glucose changes as it proceeds through glycolysis. Explain why ATP is required for the energy investment phase of glycolysis. Identify where substrate-level phosphorylation and the reduction of NAD+ occur in glycolysis. Describe where pyruvate is oxidized to acetyl CoA, what molecules are produced, and how this process links glycolysis to the Krebs cycle. Explain how the exergonic "slide" of electrons down the electron transport chain is coupled to the endergonic production of ATP by chemiosmosis. Describe the process of chemiosmosis. Explain how membrane structure is related to membrane function in chemiosmosis. Summarize the net ATP yield from the oxidation of a glucose molecule by constructing an ATP ledger that includes coenzyme production during the different stages of glycolysis and cellular respiration. Related Metabolic Processes Explain why fermentation is necessary. Compare the fate of pyruvate in alcohol fermentation and lactic acid fermentation. Compare the processes of fermentation and cellular respiration. Describe evidence that the first prokaryotes produced ATP by glycolysis. Describe how food molecules other than glucose can be oxidized to make ATP. Explain how glycolysis and the Krebs cycle can contribute to anabolic pathways. Explain how ATP production is controlled by the cell and what role the allosteric enzyme, phosphofructokinase, plays in the process. Chapter 8: Photosynthesis Vocabulary: absorption spectrum action spectrum autotroph Calvin cycle CAM plant carbon cycle carbon fixation carotenoids chlorophyll a chlorophyll b chloroplast cyclic electron flow cyclic photophosphorylation global warming glyceraldehyde-3-phosphate (G3P) guard cells light reactions mesophyll cell mesophyll NADP+ noncyclic electron flow photon photorespiration photosynthesis photosystem I photosystem II primary electron acceptor reaction center rubisco stomata stroma thylakoid AP Biology Mrs. Ward’s Class Learning Objectives: Photosynthesis in Nature Distinguish between autotrophic and heterotrophic nutrition. Describe the structure of chloroplasts and indicate their locations within plant cells. Describe where most chloroplasts are located in a leaf. Explain how chloroplast structure relates to its function. Write a summary equation for photosynthesis. The Pathways of Photosynthesis Explain the role of redox reactions in photosynthesis. Describe in general the two main stages of photosynthesis. Describe the relationship between an action spectrum and an absorption spectrum. Explain why the absorption spectrum for chlorophyll differs from the action spectrum for photosynthesis. List the wavelengths of light that are most effective for photosynthesis. Explain what happens when chlorophyll or accessory pigments absorb photons. List the components of a photosystem and explain their functions. Science as a Process Trace electron flow through photosystems II and I. Compare cyclic and noncyclic electron flow and explain the relationship between these components of the light reactions. Describe important differences in chemiosmosis between oxidative phosphorylation in mitochondria and photophosphorylation in chloroplasts. Summarize the carbon-fixing reactions of the Calvin cycle and describe changes that occur in the carbon skeletons of intermediates. Describe the role of ATP and NADPH in the Calvin cycle. Describe what happens to rubisco when the O2 concentration is much higher than CO2. Describe the major consequences of photorespiration. Describe two important photosynthetic adaptations that minimize photorespiration. Describe the fate of photosynthetic products. Explain how photosynthesis is affected by various environmental factors. Explain how photosynthesis interacts with other metabolic pathways. Chapter 42: Ecosystems & Energy, Concept 42.4 Vocabulary: biogeochemical cycle ecosystem Learning Objectives: Describe the carbon cycle and explain the importance of carbon to all living organisms. Explain how decomposition affects the rate of nutrient cycling in ecosystems. Describe how increased atmospheric concentrations of carbon dioxide could affect Earth. Describe how human interference might alter the biosphere.