Milk Analysis Laboratory FAO workshop: Training on the development of good identification and milk recording systems Mart Kuresoo, Head of Analysing Laboratory Department November 12th, 2013 Topics •History of the performance tests of milk samples in Estonia • Legislation •General requirements for the laboratory •Structure of the Laboratory www.jkkeskus.ee Laboratory Topics •Equipment and their selection •Maintenance costs •Chemicals used and their cost www.jkkeskus.ee Laboratory Topics •Logistics of milk samples •Identification of raw milk components •Volume of analyses •Quality system of the laboratory www.jkkeskus.ee Laboratory History Gerber Method – 1891 Niklaus Gerber Kjeldahl Method – 1883 Johan Kjeldahl Photometric Method – 1963 Foss Electric Spectrometry – 1975 Foss Electric www.jkkeskus.ee Laboratory History 1924 www.jkkeskus.ee Laboratory History 1958 www.jkkeskus.ee Laboratory History 1970 www.jkkeskus.ee Laboratory History 1982 www.jkkeskus.ee Laboratory History 1984 www.jkkeskus.ee Laboratory History 1996 www.jkkeskus.ee Laboratory Legislation •Farm Animals Breeding Act •Performance Testing Handbook •ICAR Performance Testing Guide (2012) www.jkkeskus.ee Laboratory ICAR Performance Testing Guide (2012) ICAR's instructions for the laboratory There are no direct technical requirements There are requirements for the procedures used: •Formal reference methods are used; •Recognised routine methods are used; •Recommendations for the quality of samples are presented; •Recommendations for quality control of analysing are presented. www.jkkeskus.ee Laboratory Reference Methods (ICAR) Has to be internationally recognised Milk analysed by these methods is used for: •Calibrating and controlling routine equipment •Setting control instruments ISO 1211 – identification of fat content gravimetrically ISO 8968 – identification of protein content www.jkkeskus.ee Laboratory Routine Methods (ICAR) Instrumental methods should be standardised or have formal national recognition: •ISO 9622/IDF141 – fat, protein, lactose •ISO 13366 – somatic cells Methods of national recognition must also be recognised by ICAR under the protocol of ICAR www.jkkeskus.ee Laboratory Requirements for Milk Samples (ICAR) •Quality of milk sample is essential •Sample bottles have to be suitable •Quantity of sample in the bottle is very important •Preservative of milk sample and its usage www.jkkeskus.ee Laboratory Quality Control in Laboratory (ICAR) Quality control of reference methods • Systematic errors in reference analysis transfer to routine analysis and all comparative tests External control: • Routine laboratory has to take part in comparative tests that can be organised by the national reference laboratory which itself takes part in international comparative tests • Can also take part in international comparative tests, if needed • Minimum frequency of comparative tests is 4 times per year www.jkkeskus.ee Laboratory Quality Control in Laboratory (ICAR) Internal control: •In international comparative tests, certified comparative materials can be used • Control samples prepared by the laboratory itself can also be used www.jkkeskus.ee Laboratory Quality Control in Laboratory (ICAR) Quality control of routine methods is performed according to Part II of ISO 8196/ IDF 128 External minimum control 4 times per year: •By national expert laboratory •On the basis of reference samples of the reference laboratory •By comparative tests between the laboratories •Objects of control are at least linearity and repeatability www.jkkeskus.ee Laboratory Quality Control in Laboratory (ICAR) Internal control: •Performed continuously by routine analysis with control milk samples (fat, protein, lactose, urea – ISO9622/IDF141, somatic cells – ISO 13366/IDF148) •And with certified control material: somatic cells, bacteria •Used for: Calibration, repeatability, transmission, linearity, transmission factors, homogenisation, zero values www.jkkeskus.ee Laboratory General Requirements for the Laboratory Work area has to be suitable: •Location •Size •Division •Floor •Cardinal points •Possibility to install communications www.jkkeskus.ee Laboratory General Requirements for the Laboratory Environment that is suitable for people and equipment: •Ventilation •Cooling •Heating •Recreation area •Sanitary installations www.jkkeskus.ee Laboratory Structure of the Laboratory Depends on the obligations of the laboratory: •Analysis of performance testing samples only •Analysis of dairy samples only •Analysis of both aforementioned samples together •Analysis of additional samples •Control laboratory •Level and organisation of quality system of the laboratory •National requirements www.jkkeskus.ee Laboratory Laboratory Equipment Selection of equipment is the matter of free choice Compared to the vehicle market, the choice of analysers is relatively small The choice of auxiliary equipment is much wider It is not wise to use postal services and Internet sales services www.jkkeskus.ee Laboratory Laboratory Equipment Analysers: •Foss Analytical AS (1956, DK) •Anritsu Corporation (1890, Japan) •Bentley Instruments Inc. (1982, USA) •Delta Instruments B.V. (1988, Netherlands) •Advanced Instruments Inc. •Anadis Instruments www.jkkeskus.ee Laboratory Laboratory Equipment Comby Foss FT+ (470,000 €) www.jkkeskus.ee Laboratory Laboratory Equipment The operating principle of MilkoScan™ FT+ is based on Fourier Infrared Transmission (FTIR) and it operates in the central area of infrared of 3-10 µm. Component Measuring range Performance range Repeatability Accuracy* Bulk Accuracy Single cow Fat 0-15% Protein 0-10% Lactose 0-10% Solids 0-20% Urea Patented¹ 2-15% 2-10% 2-10% 2-20% 10-100mg/dl Citric Acid 0.1-0.5% FPD(Screening) 0.1-0.5% Sd< 0.005% Sd < 0.01% Sd < 0.015% 400-600m°C 450-550 m°C Sd <0.5 m°C Sd <4 m°C N/A www.jkkeskus.ee Cv < 0.5% Cv < 0.5% Cv < 0.5% Cv < 0.5% 10-100mg/dl Cv < 1.0% Cv < 1.5% Cv < 0.9% Cv < 1.5% Cv < 0.9% Cv < 1.5% Cv < 1.0% Cv < 1.5% Sd <1.5mg/dlSd < 3mg/dl Sd < 3.5mg/dl Laboratory Laboratory Equipment The operating principle of Fossomatic FC is based on flow cytometry where the DNA of somatic cells' nuclei is stained and counted in flow. www.jkkeskus.ee Laboratory Laboratory Equipment Auxiliary equipment: •Water purification equipment •Washing equipment •Drying equipment •Refrigerating equipment •Ventilating equipment •Compressed air equipment, driers •Environment control equipment •Hydrobaths •Tables www.jkkeskus.ee Laboratory Laboratory Equipment Control laboratory: •Scales – analytical and larger •Drying ovens •Hydrobaths •Magnetic stirrer •Block-digestion apparatus – Büchi K435 •Distillation apparatus – Büchi B-324 www.jkkeskus.ee Laboratory Laboratory Equipment Control laboratory: •Automatic and manual titrators •Membrane technology – protein separation •CL-10 Micro – urea reference •Cryoscope – freezing spot – and its purpose •Thermometres – classic, electronic – calibrated www.jkkeskus.ee Laboratory Laboratory Equipment Maintenance and maintenance costs Analysers: •Competence of manufacturer's representatives, contract? •Competence of maintenance staff of laboratory equipment •Cost of physical and moral ageing of the equipment •New equipment periodically available in the market •Original spare parts – according to pricelist www.jkkeskus.ee Laboratory Laboratory Equipment Maintenance and maintenance costs Analysers: •Analogue spare parts from other manufacturers •Spare parts prepared on-site •Impact of the quality of milk sample on maintenance costs and operation speed of analyser www.jkkeskus.ee Laboratory Laboratory Equipment Maintenance and maintenance costs Other equipment: •Periodic verification and calibration of scales – according to pricelist •Other equipment according to the recommendations of the manufacturer and nature of work – 20-60 € per hour, spare parts, used materials www.jkkeskus.ee Laboratory Chemicals We use only the products of recognised manufacturers and suppliers, for which the list has been compiled Chemical kits for analysers: MSC FT+: S 6060 - zero concentrate - 69 € MSC FT+: concentrate of washing solution - 94 € MSC 6000: S470 - concentrate of washing solution - 81 € Fossomatic 5000: reagent E Buffer - 250 € reagent B Colour - 1359 € - for 25,000 samples reagent D Washing - 128 € www.jkkeskus.ee Laboratory Chemicals Analytical chemicals: Chemical registry has been created which contains name and location in store book and physical location in laboratory Store book contains precise data related to chemical: •Where it was bought from and on the basis of which document •Manufacturer •Quantity •Usage period •Shelf-life www.jkkeskus.ee Laboratory Chemicals Analytical chemicals Quantities used: •Users keep constantly account of this •Quality manager conducts inspections and submits orders, if needed In case of quality deviations, the reason is determined and manufacturer or supplier is replaced, if needed www.jkkeskus.ee Laboratory Milk Sample Collection •Sample collection is not part of laboratory's competence, but all successive phases depend on this •Samples are collected from approximately 300 points •Milk samples are collected from each point once a month •There are 17 sample collection rounds •There are two cars and two drivers www.jkkeskus.ee Laboratory Handling of Milk Samples Conservation: •Physical and chemical properties of milk have to be conserved from collecting the sample to analysing •Must not affect reference samples •Must not affect reference analyses •Can affect routine analysis to an insignificant extent, the impact of which is eliminated upon calibration www.jkkeskus.ee Laboratory Handling of Milk Samples Preservative: •Has to conform to national health protection requirements •Has to conform to environmental requirements •Historically, potassium dichromate was used •Bronopol tablets are the best •Samples have to be shaken half an hour after collecting them •Samples can be stored up to 72 hours •Sample bottle 30-70 ml; price 0.16 € www.jkkeskus.ee Laboratory Handling of Milk Samples Transportation: •Warming has to be avoided •Freezing has to be avoided •Thermo-insulated van according to quantity of samples and possible additional services •Taking road conditions into account upon making the choice •Acceptable conditions for the driver •Navigation device •Availability of maintenance www.jkkeskus.ee Laboratory Handling of Milk Samples Transportation: •Sample boxes •Importance of material •Size •Separator •Suitability for storage www.jkkeskus.ee Laboratory Handling of Milk Samples Storage: •In barn – in cool room •In laboratory's refrigerator – 0-4 °C •Preanalysis period in laboratory www.jkkeskus.ee Laboratory Identified Milk Components Minimal necessity for performance testing: •Fat •Protein •Somatic cells In addition, it is possible to offer: •Urea •Ketone bodies – acetone and BHB •Fractions of fatty acids •Mastitis pathogens •etc. www.jkkeskus.ee Laboratory Identified Milk Components www.jkkeskus.ee Laboratory Number of Analyses Conducted in ARC Laboratory In 1971 In 1988 In 1993 In 2010 In 2012 31,000 2,561,000 1781000 877,314 890,756 Laboris analüüsitud proovide arv (sh piimatööstuse ja jk proovid kuid v.a dna-proovid) 90000 88000 86000 84000 2008 82000 2009 80000 2010 78000 2011 2012 76000 74000 72000 70000 www.jkkeskus.ee VEB MÄR JAN APR MAI JUN JUL AUG SEP OKT NOV Laboratory DET Work Volume in 2012 1,350,000 prepared sample bottles 890,756 milk samples for performance testing 78,648 milk samples from dairies 16,875 completed sample boxes 2,271 mastitis samples 364 times control milk to dairies 52 control milks for analysers 1 CECA LAIT for practice www.jkkeskus.ee Laboratory Number of Samples in 2012 ANALÜÜSITUD PIIMAPROOVE tk. JAN VEB MÄR APR MAI JUN JUL AUG SEP OKT NOV 73178 73398 74775 75300 74242 74189 75057 75181 76048 75808 71323 JK 89,82 92,03 92,04 91,98 90,25 91,95 91,33 92,49 92,73 91,19 92,52 % jk lisapr. Meierei 8084 6313 6386 6440 7944 6197 7111 5958 5942 7278 5650 9,92 7,92 7,86 7,86 9,65 7,67 8,64 7,32 7,24 8,74 7,32 % Tänav % Kokku 152 0,26 158 0,21 1278 5 81469 79755 81238 81866 82359 80787 82282 81384 82104 83236 77187 77870 971537 972010 2271 9 DNA proove 149 44 0,05 178 77 0,10 307 126 0,16 448 www.jkkeskus.ee 73 0,10 169 301 0,38 134 14 0,03 109 145 0,19 198 24 0,03 142 50 0,07 172 114 0,16 Kokku Päevas proove tööpäevi 254 72257 890756 3507 92,91 1318 5,2 5355 78658 756 6,88 DET 225 40 Laboratory Quality System of the Laboratory •Laboratory is accredited since 15 January 1999 •Initial accreditation on the basis of ISO/IEC 25 and EN 45001 •New accreditation once in every five years •Accreditation on the basis of EN ISO/IEC 17025 •We use EAC as accreditation institution •Estonian Accreditation Centre (EAC) is the member of European co-operation for Accreditation (EA) since June 2000 www.jkkeskus.ee Laboratory Quality System of the Laboratory •The objective of the quality system is to issue reliable analysis results •This enables to recognise the analysis results everywhere •No need for repetitive analyses •Quality of raw materials and finished products is guaranteed www.jkkeskus.ee Laboratory Quality System of the Laboratory Quality management system: •Includes all works performed in laboratory •Guarantees the satisfaction of the needs and expectations of customers using laboratory services •Guarantees confidentiality unnecessary expenses www.jkkeskus.ee and avoids Laboratory Quality System of the Laboratory Tools of the quality management system: •Quality management system documentation •Management system audits and inspections •Implementation of measures on the basis of these audits and inspections for improving quality www.jkkeskus.ee Laboratory Quality System of the Laboratory Quality manual: •Describes the laboratory’s quality management system • The purpose of the quality manual is to support and contribute to the implementation of the laboratory's quality policy www.jkkeskus.ee Laboratory Quality System of the Laboratory Quality manual: Pursuant to the statutes, includes the following fields of activity of analyses laboratory: •Collection and transportation of milk samples •Analysis of milk samples •Issuing analysis results www.jkkeskus.ee Laboratory Quality System of the Laboratory •Quality management system documentation is prepared by quality manager and approved by laboratory manager •Relevant quality management system documentation is presented to the staff by the quality manager and consistently implemented by the staff www.jkkeskus.ee Laboratory Competence Tests CECA LAIT and ICAR www.jkkeskus.ee Laboratory Quality System of the Laboratory Fat content Rasvasisalduse hälve hälve 0,5 0,4 0,3 0,2 0,1 0 -0,1 -0,2 -0,3 -0,4 -0,5 0,41 0,16 0,16 0,13 0,11 0,05 0,09 0,08 0,07 0,08 0,02 0,07 0,07 0,05 0,02 0,09 0,11 0,09 0,07 0,14 1. 2. -0,02 -0,02 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. osavõtu kord standardhälve Standardhälve 0,3 0,2 0,12 0,11 0,05 0,06 0,06 0,05 0,07 0,04 0,03 0,04 0,04 0,06 0,05 0,06 0,05 0,06 0,1 0,11 0,05 0,05 0,05 0,06 0 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. osavõtu kord www.jkkeskus.ee Laboratory Quality System of the Laboratory Nitrogen content hälve Lämmastikusisalduse hälve 0,095 0,1 0,08 0,06 0,04 0,014 0,0160,0050,002 0,022 0 -0,002 0,02 -0,002 -0,006 -0,005 -0,012 0 -0,02 -0,04 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. 23. -0,007 -0,015 -0,003 -0,033 -0,019 -0,008 -0,008-0,008 -0,06 -0,003 -0,052 -0,08 -0,062 osavõtu kord standardhälve Standardhälve 0,05 0,041 0,04 0,03 0,0190,016 0,0180,0240,015 0,014 0,014 0,012 0,02 0,0100,0100,0110,007 0,01 0,01 0,01 0,0070,013 0,008 0,01 0,008 0,008 0,01 0 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. osavõtu kord www.jkkeskus.ee Laboratory Quality System of the Laboratory Ring tests of bacteria counter Kokkulangevus %-des BSC149(84) (2000-2012 a) 110 100 kokkulangevuse % 90 80 70 60 50 40 30 20 10 0 2. 9. 16. 23. 30. 37. 44. 51. 58. 65. 72. 79. 86. 93. 100. 107.114. 121. 128.135. 142. 149.156. 163. osavõtu kord www.jkkeskus.ee Laboratory Quality System of the Laboratory Results of ring tests (70 to 80 participants) rasv CECALAIT ICAR lämmastik CECALAIT ICAR laktoos ICAR CECALAIT külmumistäpp somaatilised rakud CECALAIT CECALAIT ICAR karbamiid CECALAIT ICAR osalejaid koht osalejaid koht osalejaid koht osalejaid koht osalejaid koht osalejaid koht osalejaid koht osalejaid koht osalejaid koht osalejaid koht osalejaid koht 4.03.1998 2.09.1998 10.03.1999 15.09.1999 8.03.2000 6.09.2000 8.03.2001 3.09.2001 8.03.2002 3.09.2002 6.03.2003 4.09.2003 9.03.2004 6.09.2004 9.03.2005 7.03.2006 6.03.2007 1.03.2008 10.03.2009 7.09.2010 7.03.2011 6.03.2012 33 40 40 41 39 40 41 33 41 48 41 47 38 41 36 38 35 37 36 38 / 20 / 15 / 5 / 15 / 5 / 6 / 8 / 6 / 10 / 7 / 15 / 14 /7 / 16 / 12 / 8 / 24 20 /22 / 12 18 25 20 18 21 21 21 22 23 26 20 23 / 12 / 10 / 2 / 5 / 3 / 3 / 3 / 3 / 8 / 4 / 6 / 7 21 17 18 18 20 / 7 / 9 / 4 / 13 13 62 61 74 64 73 69 78 62 74 77 69 67 71 68 62 70 68 67 68 68 19 / 6 www.jkkeskus.ee 15 / 4 13 / 7 / 31 / 53 / 13 / 38 / 54 / 15 / 3 / 4 / 8 /16 /15 / 9 / 3 / 6 /37 / 6 / 19 13 /28 /13 18 25 20 18 19 20 22 22 25 27 19 22 / 9 / 20 / 5 / 10 / 11 / 4 / 1 / 2 / 2 / 5 / 9 / 5 21 19 18 20 20 / 3 / 10 / 2 / 1 7 18 / 6 18 / 3 16 / 5 30 29 33 24 34 30 34 28 43 40 41 38 32 37 31 37 40 32 32 27 / 6 / 12 / 8 / 14 / 2 / 4 / 11 / 1 / 3 / 2 / 9 / 10 /6 / 5 / 4 / 7 / 8 14 / 2 / 4 12 15 11 8 15 14 16 16 22 18 19 16 / / / / / / / / / / / / 4 5 1 6 1 3 5 1 2 2 3 4 17 15 18 21 15 / 5 / 4 / 1 / 2 11 17 / 3 14 / 3 15 / 1 43 45 38 12 12 18 16 22 30 27 29 30 34 56 50 50 52 73 / 43 / 39 / 31 / 9 / 9 / 16 / 12 / 5 / 7 / 5 / 10 / 3 / 9 / 25 / 29 20 / 7 / 3 42 32 33 39 33 70 77 69 69 68 71 70 71 70 86 88 74 / 22 / 20 / 10 / 9 / 6 / 52 / 34 / 7 / 24 / 59 / 58 / 27 / 28 / 27 25 / 63 / 25 11 17 17 17 17 20 19 16 17 / / / / / / / / / 6 9 5 3 3 13 5 6 3 19 17 17 21 21 / 14 / 10 / 4 / 10 4 36 38 37 39 33 30 34 31 39 41 40 33 34 34 / 3 / 6 / 6 / 8 /13 /21 /8 / 2 / 2 / 2 / 33 16 / 9 / 4 15 / 1 16 / 4Laboratory 14 / 2 17 17 19 19 16 17 /1 /3 /1 /4 /3 /6 13 15 15 18 15 /7 /1 /1 /15 8 14 / 4 13 / 7 13 / 1 Quality System of the Laboratory The quality system is audited once a year: •Performance of previous audit •Results of control visit by accrediting body •Results of conducted internal audits •State of quality manual •Results of comparative results and their necessity in the future •Changes in quality management system; efficiency of the system •Results of the handling of complaints; customer satisfaction •Staff and training; efficiency of training •Sufficiency of staff and equipment www.jkkeskus.ee Laboratory Identification of Mastitis Pathogens Mastitis 12 - 2010 Mastitis 16 - 2012 1. Staphylococcus aureus 2. Staphylococcus sp. 3. Streptococcus agalactiae 4. Streptococcus dysgalactiae 5. Streptococcus uberis 6. Escherichia coli 7. Enterococcus sp. (incl. E. faecalis and E. faecium) 8. Klebsiella sp. (incl. K. oxytoca and K. pneumoniae) 9. Serratia marcescens 10. Corynebacterium bovis 11. Arcanobacter pyogenes, Peptostreptococcus indolicus 12. Mycoplasma bovis 13. Mycoplasma spp 14. yeast 15. alga Prototheca spp www.jkkeskus.ee Laboratory Identification of Mastitis Pathogens • A test Pathoproof Mastitis PCR Assey identifies 15 bacteria causing mastitis. In addition to pathogens, the beta-lactamase gene is also identified from a milk sample that shows penicillin resistance •Identification is conducted by performance testing or from separately collected samples, incl. general milk and mammary quarters •Bottles are labelled with a bar code •Identified pathogen and its level is reported: +,2+,3+ •Price of samples: 1-4 samples - 30 € 5-9 samples - 27 € >10 samples - 25 € www.jkkeskus.ee Laboratory Identification of Ketone Bodies Acetone BHB •Ketosis is a metabolic disease that causes major expenses in some herds •Ketosis is usually a problem for the whole herd •Subclinical limit of ketosis is 0.15 mmol/l for acetone and 0.1 mmol/l for BHB •Objective is to give a monthly overview of cows who have begun milking (1 to 2 months) www.jkkeskus.ee Laboratory Thank you and I hope you have learned something new! www.jkkeskus.ee Kreutzwaldi 48A Tartu 50094, Estonia Phone (+372) 738 7700 www.jkkeskus.ee Laboratory