Chapter 12 : Patterns of Inheritance Copyright © McGraw-Hill Companies Permission required for reproduction or display Chapter 12 Outline • • • • Physical Basis of Inheritance Mendel Single Traits Multiple Traits on Different and same Chromosomes • Sex Determination and Sex-Linked Inheritance • Non-Mendelian genetics • Human Genetic Disorders (defective genes or chromosomic number). Inheritance • • • • Inheritance is the process by which the characteristics of individuals are passed to their offspring Genes encode these characteristics A gene is a unit of heredity that encodes information for the form of a particular characteristic The location of a gene on a chromosome is called its locus Alleles Homologous chromosomes carry the same kinds of genes for the same characteristics (at the same loci) Genes for the same trait may show alternate versions, called alleles Each cell carries two alleles per characteristic, one on each of the two homologous chromosomes – – Same alleles homozygous individual; Different alleles heterozygous pair of homologous chromosomes Color Height shape Gregor Mendel • • • Augustinian monk in late 1800 in the now Czech Republic) Studied botany and mathematics at the university level Experimentation with pea plant inheritance took place in the monastery garden Advantages of Garden Pea : • Large number of true-breeding varieties (homozygous for a trait, always producing the same physical form) • Many hybrids previously produced. – Expect segregation of traits. • Small and easy to grow. – Short generation time. • Sexual Organs enclosed in flower. – Self-fertilization – Cross fertilization Mendel’s Experimental Design • He studied characteristics that have different forms (like purple versus white) • He only studied one trait (characteristic) at a time • Applies math to explain his results • Allowed pea plants to self-fertilize for several generations. – Assured constant traits. • Performed crosses between varieties exhibiting alternative character forms. • Permitted hybrid offspring to self-fertilize for several generations. Mendel’s Results • F1 Generation (First Filial) • Offspring of white X purple flower: – flower color resembling one parent (no blending inheritance). – All flowers exhibited purple flowers (dominant trait) and none exhibited white flowers (recessive trait). pollen Parental generation (P) pollen cross-fertilize true-breeding, purple-flowered plant true-breeding, white-flowered plant First-generation offspring (F1) all purple-flowered plants Copyright © 2005 Pearson Prentice Hall, Inc. Mendel’s Results • F2 Generation (Second Filial) – F1 X F1 plants (purple) F2 mostly purple but some white (recessive)! – Dominant : Recessive ratio among F2 plants was always close to 3:1. • Discovered ¼ were always true breeding recessives. • Disguised 1:2:1 ratio Firstgeneration offspring (F1) self-fertilize Secondgeneration offspring (F2) 3/4 purple 1/4 white Copyright © 2005 Pearson Prentice Hall, Inc. • Explanation: Law of Segregation • The two alleles for a characteristic separate during gamete formation (meiosis) – Homologous chromosomes separate in meiosis anaphase I – Each gamete receives one of each pair of homologous chromosomes and thus one of the two alleles per characteristic. Homozygous produces all gametes with same alleles meiosis A A homozygous parent A A gametes Heterozygous produces gametes with different alleles A a heterozygous parent A a gametes purple parent P PP P all P sperm and eggs white parent pp p p all p sperm and eggs Copyright © 2005 Pearson Prentice Hall, Inc. F1 offspring sperm eggs P p Pp P Pp or p Gametes from F1 can be… gametes from F1 plants eggs sperm F2 offspring P P PP P p Pp p P Pp p p pp Mendel’s Model of Heredity • Factors: Parents transmit discrete physiological trait information (alleles) to offspring. • 2: Each individual receives two factors that may code for same, or alternative, character traits. • Not identical: Not all copies of a factor are identical. – Alleles • Homozygous - Same alleles. • Heterozygous - Different alleles. Mendel’s Model of Heredity • The two alleles do not influence each other in any way. • Presence of a particular allele does not ensure its encoded trait will be expressed in an individual carrying that allele. – Genotype - Totality of alleles. – Phenotype - Physical appearance. Interpretation of Mendel’s Results • Notational Convention – P - Dominant allele (purple) – p - Recessive allele (white) • PP - Homozygous dominant (purple) • Pp – Heterozygous but is purple • pp - Homozygous recessive (white) Interpretation of Mendel’s Results • F1 Generation – PP x pp (parental generation) yielded all Pp offspring. • F2 Generation – Pp x Pp yielded: (1:2:1) ratio • 1 PP • 2 Pp • 1 pp • Punnett Squares Punnett squares Pp self-fertilize 1 2 P eggs 1 2 p 1 P 2 sperm 1 4 1 4 PP Pp 1 p 2 1 4 sperm 1 4 pP offspring genotypes eggs 1 P 2 1 2 P 1 4 PP 1 P 2 1 2 p 1 4 Pp genotypic ratio (1:2:1) P 1 2 P 1 2 P 1 4 pP 1 2 p 1 4 pp phenotypic ratio (3:1) 1 PP 4 2 4 Pp 1 2 pp 1 4 pp 3 4 purple 1 white 4 sperm eggs offspring genotypes 1 2 P 1 2 P 1 4 PP 1 2 P 1 2 p 1 4 Pp genotypic ratio (1:2:1) 1 4 2 4 1 2 1 2 P 1 2 P 1 4 pP P 1 2 p 1 4 pp 1 4 phenotypic ratio (3:1) PP 3 4 purple 1 4 white Pp pp Mendelian Inheritance • Mendel’s First Law of Heredity: Segregation From monohybrid crosses (only one character varied): – Alternative alleles of a character segregate from each other in heterozygous individuals and remain distinct (the two alleles segregate independent of each other during meiosis) Testcross • If you cross a plant with a dominant phenotype but an unknown genotype (PP or Pp) with a homozygous recessive individual (pp), the two possible genotypes will yield different results. – pp x PP = 100% (Pp) – pp x Pp = 50% (pp) : 50% (Pp) pollen PP or Pp sperm unknown pp all eggs p if PP if Pp p egg all sperm P p all Pp sperm 1 P 2 1 Pp 2 1 p 2 1 2 pp egg Mendelian Inheritance • Mendel’s Second Law of Heredity: Independent Assortment – From dihybrid crosses (two characters varied in cross): i.e. color and texture – Genes that are located on different chromosomes assort independently of one another. Second Law: of Independent Assortment Seed shape smooth wrinkled yellow green inflated constricted green yellow purple white at leaf junctions at tips of branches tall (1.8 to 2 meters) dwarf (0.2 to 0.4 meters) Seed color Pod shape Pod color Flower color Flower location Plant size Dihybrid cross: Considering Shape and Color: F2 SsYy self-fertilize eggs Shape: either Smooth (S) or wrinkled (s) Color: either Yellow (Y) or green (y) 1 4 1 4 sperm Cross: Smooth (S) and Yellow (Y) x wrinkled (s) and green (y) 1 4 1 4 SSYY x ssyy 1 4 SY Sy 1 4 SY 1 4 1 4 sY sy 1 16 SSYY 1 16 SSYy 1 16 SsYY 1 16 SsYy 1 16 SSyY 1 16 SSyy 1 16 SsyY 1 16 Ssyy 1 16 sSYY 1 16 sSYy 1 16 ssYY 1 16 ssYy 1 16 sSyY 1 16 sSyy 1 16 ssyY 1 16 ssyy sY sy 3 4 smooth x 3 4 yellow phenotypic ratio (9:3:3:1) 9 = 16 smooth yellow 3 4 smooth x 1 4 green = 3 16 smooth green 1 4 wrinkled x 3 4 yellow = 3 16 wrinkled yellow 1 4 wrinkled x 1 4 green = 1 16 wrinkled green seed shape F1= SsYy Smooth and Yellow Sy seed color Copyright © 2005 Pearson Prentice Hall, Inc. S pairs of alleles on homologous chromosomes in diploid cells s Y y S Y s y chromosomes replicate replicated homologues pair during metaphase of meiosis I, S orienting like this or like this s y Y meiosis I S Y s y S y s Y S Y s y S y s Y meiosis II S S Y s Y SY y y s S S s y y sy Sy independent assortment produces four equally likely allele combinations during meiosis Copyright © 2005 Pearson Prentice Hall, Inc. s Y Y sY Genes on the Same Chromosome • • If 2 genes are on the same chromosome, they are usually linked, unless there is a lot of distance between them. If there is enough distance, recombination may occur. Example of genetic linkage – Flower color and pollen shape are on the same chromosome in peas – Gene assignments • • Let P = purple flowers and p = red flowers Let L = long pollen shape and l = round shape Recombination • • • Genes on the same chromosome do not always sort together Crossing over in Prophase I of meiosis creates new gene combinations Crossing over involves the exchange of DNA between chromatids of paired homologous chromosomes in synapsis Recombination • Example of crossing over for flower color and pollen shape with parent PpLl – – Assume P is linked with L and p is linked with l Crossover between chromatids of different homologous replicated chromosomes yields some pL and Pl gametes P L P L P L P L p L p L p p l l P p l l P p l l Human Chromosomes • Human somatic cells have normally have 23 pairs of chromosomes (46 total). – 22 pairs of autosomes – 1 pair of sex chromosomes • XX = Female • XY = Male female parent Sex Determination in mammals: X1 X2 XX= female eggs XY= male X1 X1 male parent Y Xm X2 Xm Xm sperm Xm X2 female offspring X1 Y X2 Y male offspring Y X chromosome is much larger than the Y and carries over 1000 genes Y chromosome is smaller and carries only 78 genes Human Chromosomes • Mosaics: • One X chromosome in females is inactivated to heterochromatin early in embryonic development (phenotypic mosaics, e.g. calico cat) – Visible as a darkly staining Barr body attached to the nuclear membrane. Sex-linkage • A trait determined by a gene on the sex chromosome is said to be sex-linked. • First discovered in Drosophila in early 1900s • Eye color genes carried by the X chromosome – R = red eyes (dominant) – r = white eyes (recessive) female parent Eye color is linked to the X chromosome in flies r R XRXr XR Xr R r eggs XR R Xr R R r R all the F2 females have red eyes male parent XRY XR sperm R XR Y Y XR XR female offspring R Xr XR half the F2 males have red eyes, half have white eyes r XRY male offspring Xr Y How Sex-Linkage Affects Inheritance • Sex-linked (specifically X-linked) recessive alleles displayed their phenotype more often in males – Males showed recessive white-eyed phenotype more often than females in an XRXr x XrY cross Males do not have a second X-linked gene (as do females) which can mask a recessive gene if dominant Incomplete Dominance RR RR RR F1: F2: – Two copies of the C1 allele curly hair – Two copies of the C2 allele straight hair – Heterozygotes (C1C2 genotype) wavy hair 1 2 1 2 1 2 R 1 4 RR 1 4 RR’ 1 4 RR 1 4 R’R eggs 1 2 R sperm • Heterozygotes have intermediate phenotype • (i.e. : snapdragon color; human hair texture) RR R Incomplete Dominance • If two wavy-haired people marry, their children could have any of the three hair types: curly (C1C1), wavy (C1C2), or straight (C2C2) Multiple Alleles • Having more than two types of alleles for a given characteristic • Thousands of alleles for eye color in fruit flies, producing white, yellow, orange, pink, brown, or red eyes • Human blood group genes producing blood types A, B, AB, and O – Three alleles in this system: A, B, and O: red blood – – – – cells with different sugars added in the membrane: B = IB adds galactose A = IA adds galactosamine O = i adds no sugar AB = IAB adds both Codominance • • Codominance – Heterozygous express both phenotypes. Example: Human blood group alleles – – Alleles A and B are codominant Type AB blood is seen where individual has the genotype AB Polygenic Inheritance • Phenotypes result from interaction of more than two genes at multiple loci Phenotypes show a continuous distribution, rather than discrete. – R1R1R2R2 eggs R1R2 R1R2 Examples include human height, skin color, and body build, and grain color in wheat R1R1R2R2 sperm • R1R2 R1R2 R1R1R2R2 R1R2 R1R1R2R2 R1R1R2R2 R1R1R2R2 R1R1R2R2 R1R1R2R2 R1R2 R1R1R2R2 R1R1R2R2 R1R1R2R2 R1R2 R1R1R2R2 R1R1R2R2 R1R1R2R2 R1R1R2R2 R1R2 R1R1R1R2 R1R1R2R2 R1R1R2R2 Polygenic Inheritance • Human skin color is controlled by at least 3 genes, each with pairs of incompletely dominant alleles Environmental Influence • Degree of allele expression may depend on the environment. – i.e. temperature and color • – Himalayan rabbit with black fur genotype will express it only in colder areas of the body Identical twin studies in humans reveal different IQ scores between twins Pleiotropy • Some alleles of a characteristic may create multiple phenotypic effects (pleiotropy) – Mendel’s rules specify only one phenotype possible for any allele • Example: The SRY gene in male humans – SRY gene stimulates development of gonads into testes, which in turn stimulate development of the prostate, seminal vesicles, penis, and scrotum A pedigree for a dominant trait Human Genetic Disorders • Records of gene expression over several generations of a family can be diagrammed • Careful analysis of this diagram (a pedigree) can reveal inheritance pattern of a trait • Family pedigrees I II III A pedigree for a recessive trait I II ? ? ? ? III ? IV ? ? How to read pedigrees I, II, III = generations = male = female = parents = offspring or = shows trait or = does not show trait or = known carrier (heterozygote) for recessive trait ? or ? Pedigree Analysis • Pedigree analysis is often combined with molecular genetics technology to elucidate gene action and expression Human Gene Disorders Human Genetic Disorders • Harmful effect of a detrimental allele. – Most disorders are produced by recessive alleles coding for non-functional proteins. Examples: • Albinism • Sickle-cell anemia – Rare, because affected individuals often die at a relatively young age, or cannot reproduce. – Heterozygous individuals are carriers of a recessive genetic trait (but otherwise have a normal phenotype) – Homozygous individuals are more common when individuals are related Albinism • Melanin is the dark pigment that colors skin cells, produced by the enzyme tyrosinase • An allele known as TYR (for tyrosinase) encodes a defective tyrosinase protein in skin cells, producing no melanin • Humans and other mammals who are homozygous for TYR have no skin, fur, or eye coloring (skin and hair appear white, eyes are pink) Sickle-Cell Anemia • Hemoglobin is an oxygen-transporting protein found in red blood cells. A mutant gene causes red blood cells to take on a sickle (crescent) shape and easily break – Blood clots can form, leading to oxygen starvation of tissues and paralysis – Condition is known as sickle-cell anemia Sickle-Cell Anemia • About 8% of the African population is heterozygous for sickle-cell anemia – Heterozygous individuals have some resistance to malaria Dominant Genetic Disorders • Dominant disease alleles disrupt normal cell function in a variety of ways – Produce an abnormal protein that interferes with the function of the normal one – Encode toxic proteins – Encode a protein that is overactive or active at inappropriate times and places • Transmitted from homozygous dominant, heterozygous, or arise from eggs or sperm mutations from healthy parents’ DNA Dominant Genetic Disorders • Huntington’s Disease – Dominant lethal – Delayed onset of symptoms – Trinucleotide repeat-based disorder Sex-Linked Genetic Disorders • • Several defective alleles for characteristics encoded on the X chromosome are known Sex-linked disorders appear more frequently in males and often skip generations Sex-linked genetic disorders – Red-green color blindness Sex-Linked Genetic Disorders • Hemophilia (deficiency in blood clotting protein) – Hemophilia gene in Queen Victoria of England was passed among the royal families of Europe Hemophilia Sex linked Deficiency in blood clotting Edward Duke of Kent Albert Prince of SaxeCoburg-Gotha Edward VII King of England unaffected male hemophiliac male unaffected female carrier female Victoria Princess of Saxe-Coburg Victoria Queen of England Alexandra of Denmark Leopold Duke of Albany Helen Louis IV Princess of Grand Duke of Waldeck-Pyrmont Hesse-Darmstadt Alice Princess of Hesse several unaffected chidren Beatrice Henry Prince of Battenburg present British royal family (unaffected) Victoria Elizabeth Alexandra Mary Tsarina carrier daughter and hemophiliac grandson Nicholas II Frederick Ernest Mary Irene Victoria of Russia ? ? ? ? Olga Tatiana Maria Anastasia Alexander Alfonso Albert XII Victoria Leopold Maurice Queen of Spain ? Alexis Tsarevitch Alfonso Crown Prince Copyright © 2004 Pearson Prentice Hall, Inc. Juan Beatrice ? died Marie Jaime Gonzalo in infancy Abnormal Chromosome Number • • Failure of chromosomes to separate correctly during meiosis I or II is called primary nondisjunction Non-disjunction of autosomes can occur during meiosis in the father or mother – Frequency of non-disjunction increases with the age of the parents – Fertilized egg has either one or three copies of an autosomal chromosome Abnormal Autosome Number • Down Syndrome caused by trisomy 21 – 1 in 1700 for mothers < 20 – 1 in 1400 for mothers >20<30 – 1 in 750 for mothers >30<35 – 1 in 16 for mothers >45 • Nearly all other autosomal trisomic conditions are fatal during development Abnormal Autosome Number • Down Syndrome – Characterized by distinctively shaped eyelids, among other physical features Abnormal Sex Chromosome Number • Produced by nondisjunction of sex chromosomes • X Chromosome – XXY - Klinefelter syndrome – XO - Turner Syndrome – XXX – Triple X • Y Chromosome Klinefelter 47 (XXY) Turner Turner : 45, X (or XO) XYY XXX