Chapter 9 Microbial Genetics I. Introduction An easily treatable infection with a common bacterial species (Staphylococcus aureus) becomes much more difficult to treat as it gains a new trait; namely the ability to resist the effects of the drug vancomycin. This ability is genetically controlled and analysis of the case will show that it was most likely acquired from the vancomycin-resistant strain of Enterococcus faecalis isolated from the patient’s chronic foot ulcer. II. Facts of the Case Vancomycin-resistant Staphylococcus aureus is isolated from an individual. This is the first time an S. aureus strain with this particular trait has been seen. During a prior surgery, infection with methicillin-resistant Staphylococcus aureus was treated with rifampin and, more importantly, vancomycin. The patient has several underlying health problems, which made him an attractive target for VRE infection (diabetic, chronic renal failure necessitating dialysis, chronic foot ulcers, and poor circulation). In fact, one week after the MRSA infection was treated, Vancomycin-resistant Enterococcus faecalis was cultured from the foot ulcer. Genetic analysis of the VRSA isolate revealed that it contained the most common vancomycin resistance gene (vanA) as well as the mecA gene which provides resistance to methacillin and oxacillin. Student questions: 1. What is the difference between genotype and phenotype? What two phenotypes are of particular interest in this case? 2. What biological molecules directly control genotype and phenotype? Briefly provide their functions and explain the flow of information between them. 3. How does a cell “know” when to develop a useful mutation like vancomycin resistance? 4. When the patient in the case study was treated with vancomycin, what was the effect on S. aureus cells that were not resistant to the drug? What about those cells that were resistant? 5. Methicillin acts by binding to a specific protein in the cell wall known as PBP2a (Penicillin binding protein 2a), and inhibiting cell wall synthesis. Methicillin resistance occurs when an altered form of this protein is produced by a bacterial cell, and methicillin can no longer bind. Briefly discuss how a change in the DNA of a bacterial cell could lead to production of an altered PBP2a protein. Do all changes in the DNA of an organism lead to new functions? What other outcomes can you postulate? 6. Do all mutations result in the same degree of change to the final protein product? 7. Are changes in transcription and translation mistakes as crucial as those in replication? 8. The VRSA isolated from the catheter exit site of the patient contained a previously identified vanA mutation commonly seen in many species of Enterococcus, making it unlikely that a new mutational event conferred vancomycin resistance on the already methicillin resistant Staph aureus isolate. Given this fact, how else could the S. aureus isolate have obtained the new phenotype? Start by establishing a timeline placing the major events of the case in chronological order. 9. Why would this particular patient be at increased risk for infection with VRSA?