BIOLOGY 11 HUMAN BIOLOGY The Scientific Method 1. Observation 2. Hypothesis: a testable explanation 3. Experiment: 1). control group 2). repeatability 4. Conclusion: hypothesis supported or disproved Scientists typically ask lots of questions! Characteristics of Life 1. Living things reproduce 2. Living things are composed of cells 3. Living things metabolize and grow 4. Living things respond 5. Living things maintain constant internal conditions (homeostasis) 6. Living things evolve Evolution in a Nutshell 1. Evolution: the transformation of life on Earth from its earliest beginnings to its diversity today 2. All of life is connected. Life began as a single cell more than 3 billion years ago 3. Genetic variation among individuals 4. Resources are limited – competition 5. Individuals with useful variations leave more offspring CELLULAR BIOLOGY ATOMIC STRUCTURE 1. Chemistry terms: Atom = smallest chemical unit Proton (+ charge) Neutron (neutral) Electron (- charge) Element = atom with specific # of protons in the nucleus – oxygen – 8 – the atomic number of oxygen is 8 Periodic Table lists elements in order of atomic number Isotopes are versions of an element with different number of neutrons in the nucleus – some are stable; some are radioactive 2. Electron arrangements Shells = energy levels surrounding nucleus, where electrons can orbit The number of electrons = number of protons Shells fill at lowest (innermost) energy level first First shell holds up to 2 electrons; the next shells can hold 8 electrons: Helium (AN 2) Carbon (AN 6) Chlorine (AN 17) 2 + 8 + 7 Chemical Bonds Valence shell = the outermost energy level that has any electrons in it Atoms are most stable when the valence shell is filled – see noble gases of periodic table Some atoms can “steal” electrons to fill valences shell; they are “ionized” – no longer neutral – Ex. – sodium chloride Electronegativity measures the ability to attract electrons Type of bond atoms form depends on their electronegativity 1. Very different electronegativity: IONIC BOND 2. Same electronegativity: COVALENT BOND Hydrogen bonds are between some molecules with polar covalent bonds, and are relatively weak – water – Fig. 2.7 Example: Water Unusual properties of water: 1. Cohesiveness – surface tension 2. High specific heat (vaporization) 3. Good solvent for other polar (charged molecules) When atoms bond to other atoms we have multiple atoms coming together to form a molecule – water is a molecule Water and the pH scale: The pH scale measures the concentration of hydrogen ion in solution Chemical buffers maintain/stabilize a particular pH in a solution by either absorbing or releasing hydrogen ions Macromolecules Macromolecules are VERY LARGE molecules. Many are polymers = long chains of single (monomer) subunits Biological polymers: 1. Polysaccharides (sugars) -monosaccharides2. Proteins – amino acids 3. Nucleic acids - nucleotides Macromolecules associated with living organisms Carbohydrates, lipids, proteins, nucleic acids 1. Carbohydrates – have C, H, O Two linked together form a disaccharide Polysaccharides are long chains consisting of 8 or more monomers – usually glucose A. starch – energy storage in plants B. glycogen – energy storage in animals C. chitin – cell wall of insects and crustaceans D. cellulose – cell walls of plants 2. Lipids have C, H, and are not soluble in water A. Triglycerides = fats and oils – glycerol is the backbone and fatty acids are hooked on by dehydration synthesis The different fatty acids have more or less C’s in their chains, and may have double bonds (covalent sharing of two pairs of electrons Double bonds put “kinks” in the fatty acid chain Saturated = no double bonds; pack well; solid fats Unsaturated = double bond(s); pack poorly; liquid oils B. Phospholipids – Also use glycerol backbone; two fatty acids and one phosphate group is put on The fatty acid parts are “hydrophobic” = not water soluble The phosphate group is polar and “hydrophilic” C. Steroids have four fused rings of carbon, but attachments vary. Ex.s: cholesterol, testosterone, estrogen. Not water soluble 3. Proteins are chains of amino acid subunits There are 20 kinds of amino acids, with the same basic structure but different side chains. The side chains are chemically varied (charge, size, hydrophicity) The sequence of amino acids determines what shape the protein will fold into; the shape determines function There are 4 levels of protein structure: A. Primary: Sequence of amino acids B. Secondary: Folding over of polymer. Hydrogen bonds hold the shape together 4. Nucleic acids: RNA and DNA Monomer unit is called a nucleotide = phosphate, sugar, nitrogen base Phosphate and sugars join in chain with bases paired in the center A very special nucleotide monomer is ATP, the molecule that moves ENERGY around the cell Cell Structure (eukaryotic vs. prokaryotoic) Plasma membrane, nucleus, and cytoplasm (cytosol + organelles) make up a eukaryotic cell. May or may not have a cell wall A prokaryotic cell (bacterium) has no nucleus or membrane bound organelles. May or may not have a cell wall Cell membranes, chemically, are phospholipid bylayers Membranes are very fluid and can join together or pull off like soap bubbles allowing large substances to enter or leave the cell – phagocytosis and pinocytosis May have cholesterol present Molecules are able to move across this membrane using several processes: 1. Simple diffusion 2. Osmosis 3. Facilitated transport 4. Active transport – Na+ and K+ pump - nerve and muscle cells Cell Organelles Nucleus – contains DNA (genetic material) Double membrane with pores Nucleolus – makes RNA part of ribosomes Mitochondrion – processes food molecules into ATP energy Two membranes; inner highly folded Ribosomes – factories for making proteins Very small; made of RNA and protein Endoplasmic reticulum – Rough: secretion of proteins out of the cell Smooth: membrane production; detoxification Membranous network: rough is coated with ribosomes, smooth has none Golgi complex – processing and routing of some newly made proteins Stack of flattened membranes Lysosomes: contain digestive enzymes; Membranous vesicles with enzymes inside Cytoskeleton Helps maintain cell shape. Also anchors and organizes organelles and helps with their movement 1. Microtubules: large diameter hollow fibers made of tubulin protein 2. Actin filaments: thin solid fibers made of actin protein 3. Intermediate filaments: in between other two in size; made of diverse proteins Actin filaments and intermediate filaments involved in cell shape and motion Microtubules: cilia, flagella, and the mitotic spindle; 9 + 2 configuration cilia are short and numerous flagella are long and usually singular Cilia and flagella move when the microtubules move – requires ATP Cell Energetics Cellular (aerobic) respiration breaks glucose down to carbon dioxide, water, and ENERGY. The ENERGY released is stored in the form of ATP C6H12O6 + 6 O2 6 CO2 + 6 H2O + ATP Carbon-carbon bonds contain energy; when they break, ATP is formed 1. Glycolysis (in cytoplasm): 6C 2 3C (pyruvate) + 2ATP 2. Transition: each 3C 2C (acetyl CoA) + CO2 3. Citric acid cycle: each 2C 2 CO2 + 2ATP 4. Electron transport chain: electrons from steps 1-3 bounce down acceptors to O2 (final electron acceptor) H2O + 36ATP Mitochondrial structure & ATP production Electron transport chain: inner membrane Electrons transferred down a variety of electron carriers – energy conserved Electron transport chain produces the most ATP of the 4 steps Oxygen gas required Fermentation 2 ATP produced Electron carriers give over electrons to pyruvate to produce products: Lactic acid, alcohol, CO2 are examples Examples: overworked muscles, yeasts brewing beer or raising bread Cell Division Mitosis (asexual) and cytokinesis Chromosome: tightly coiled DNA Humans: 46 per cell – 23 pairs; 2N=46 N=23 2N = diploid cell; N = haploid cell Each chromosome has a centromere Steps of Mitosis 1. Prophase – chromosomes seen 2. Metaphase – chromosomes line up in the middle 3. Anaphase – chromosomes move apart 4. Telophase – the end of chromosome division Terms to remember Nuclear envelope Chromatin Mitotic spindle Sister chromatids Cytokinesis Cell Cycle