M. S. RAMAIAH INSTITUTE OF TECHNOLOGY BANGALORE (Autonomous Institute, Affiliated to VTU) SYLLABUS (For the Academic year 2015 – 2016) VII & VIII Semestre B.E. BIOTECHNOLOGY About the Institution: M. S. Ramaiah Institute of Technology (MSRIT) was started in 1962 by the late Dr. M.S. Ramaiah, our Founder Chairman who was a renowned visionary, philanthropist, and a pioneer in creating several landmark infrastructure projects in India. Noticing the shortage of talented engineering professionals required to build a modern India, Dr. M.S. Ramaiah envisioned MSRIT as an institute of excellence imparting quality and affordable education. Part of Gokula Education Foundation, MSRIT has grown over the years with significant contributions from various professionals in different capacities, ably led by Dr. M.S. Ramaiah himself, whose personal commitment has seen the institution through its formative years. Today, MSRIT stands tall as one of India’s finest names in Engineering Education and has produced around 35,000 engineering professionals who occupy responsible positions across the globe. About the Department: Established in 2002 the department offers a four year B.E. Biotechnology Program with an intake of 60 students and a two years PG Program, M.Tech in Biotechnology with an intake of 18 students. The department is also a recognized Research Centre by VTU, Belgaum, offering M.Sc (Engg.) by research and Ph.D programs. The Department has excellent infrastructure and state of the art laboratories. All the class rooms in the department are spacious, well furnished and equipped with LCD projectors. The department library houses ample number of books which is over and above the central library facility. The department has 15 faculty members, 10 of them are Ph.D holders and the rest are M.Tech/M.Pharma. Many of the faculty members have post doctoral experience in premier institutions in India and Abroad. The faculty members have competence in core areas of biotechnology viz. food and agricultural biotechnology, health and medical biotechnology & environmental biotechnology and bioprocess engineering. The department research is focused towards these core areas and funded by national and state funding agencies like DST, AICTE, VGST, VTU and RGUHS ORGANIZATION CHART Dr. NVR Naidu Principal Dr. T.V. Suresh Kumar Registrar (Academics) Sri. Ramesh Naik Registrar (Administration) FACULTY Designation Faculty Name Qualification Specialization Dr. Channarayappa MSc (Agri), Ph.D.(India), Ph.D. (USA), PDF (USA), PGDBA Professor & Head Biotechnology, Molecular biology interdisciplinary approach, Agriculture Dr. Bindu S MSc, Ph.D., PDF (USA) Associate Professor Food Biotechnology Toxicology Dr. Chandraprabha MN MSc (Engg.), Ph.D. (Engg.) Associate Professor Biochemical Engineering Environmental BT Dr. Dhamodhar P M.Sc, M.Phil., Ph.D. Associate Professor Immunotechnology Biochemistry Dr. Ahalya N MSc, M.Phil, Ph.D., PDF Associate Professor Microbiology Environmental Biotechnology Mr. Lokesh KN M. Pharm (Ph.D.) Assistant Professor Pharmaceutical Biotechnology Dr. Sharath R MSc, Ph.D., Assistant Professor Plant & Animal BT Phytochemistry & Pharmacology Dr. Ravi Kumar YS MSc, Ph.D., PDF Assistant Professor Cancer Biology Virology Dr. Prabha M MSc, Ph.D., PDF Assistant Professor Medical biotechnology and rDNA Technology Dr. Sravanti V M.Sc., Ph.D. Assistant Professor Genomics & Proteomics, Structural Biology Mr. Samrat K M. Tech Assistant Professor Nano-Biotechnology, Microbial Biotechnology Mr. Gokulakrishna M M. Tech Assistant Professor Bio process Engineering Mrs. Bhavya SG M. Tech Assistant Professor Enzyme Technology Downstream processing Mr. T P Krishna Murthy M. Tech Assistant Professor Bioinformatics, Biochemical and Bioprocess Engineering Dr. Pradeepa K M.Sc., Ph.D. Assistant Professor Plant biotechnology, Pharmacognosy Vision of the Institute is: To Evolve into an autonomous institution of international standing for imparting quality technical education” Mission of the institute is: “MSRIT shall deliver global quality technical education by nurturing a conducive learning environment for a better tomorrow through continuous improvement and customization” Vision of the Department is: “To be a leading Biotechnology Engineering department that imparts quality technical education with strong research component, to develop solutions in the field of food, health and environment”. Mission of the Department is: “To provide quality technical education in a conducive learning environment to produce professionals, researchers with a zeal for lifelong learning and a commitment to society”. Process of deriving the vision and mission of the department Process of Deriving the PEOs of the programme Inputs from stakeholders Inputs from stakeholders Programme Educational Objectives (PEOs) of the program PEO 1: To impart strong foundation in mathematics, basic and engineering sciences contributing to Biotechnology. PEO 2: To produce graduates who can pursue higher education and research in biotechnology and allied fields. PEO 3: To produce graduates with an ability to design, develop and implement research projects and apply to solve problems related to areas of biotechnology. PEO 4: To provide opportunities to students to work in multidisciplinary teams with professional ethics, good communication, leadership skills and commitment to society. PROGRAMME OUTCOMES By the time of graduation a Biotechnology graduate will have ability to: a. Apply concepts of mathematics, basic and engineering sciences. b. Design, conduct experiments and interpret the results. c. Design processes and program in the areas of bioprocess engineering. d. Identify, formulate and solve problems in the field of biotechnology. e. Use modern techniques, skills and engineering tools. f. Exhibit interpersonal skills to function in multi-disciplinary teams and setups. g. Become responsible citizen by understanding professional and ethical responsibilities. h. Have effective professional communication with peers and community through preparation of technical reports and presentations. i. Acquire broad-based education and multidisciplinary approach in a global and societal context j. Recognize technological changes and engage in lifelong learning. k. Apply engineering and managerial skills in multidisciplinary teams to handle projects. PROGRAM EDUCATIONAL OUTCOME (PEO) ASSESSMENT The matrix given below describes assessment of PEO defined above against the outcome ak as described by ABET (Appendix I) Correlation between PEOs and POs Program Outcomes a b c d e f g h i X X X X No PEOs j 1 To impart strong foundation in mathematics, basic and engineering sciences contributing to Biotechnology. 2 To produce graduates who can pursue higher X X X X X X education and research in biotechnology and allied fields. 3 To produce graduates with an ability to design, X X X X X X X X X develop and implement research projects and apply to solve problems related to areas of biotechnology. 4 To provide opportunities to students to work in X X X X X X multidisciplinary teams with professional ethics, good communication, leadership skills and commitment to society. K X X X X Curriculum breakdown structure: The curriculum of Biotechnology Engineering programme is so structured to include all the courses that together satisfy the requirements of the programme specific criteria prescribed by the various reputed universities/institutions, those offering Biotechnology course for the Baccalaureate level of Biotechnology Engineering programme. The Course code, Course title, the number of contact hours and the number of credits for each course are given in the following table. The courses are grouped in line with the major components of the curriculum namely: (i) Mathematics and Basic sciences, (ii) Basic Engineering courses, (iii) Humanities and Social Sciences, (iv) Professional core courses, (v) Electives and (vi) industry exposure/project. Breakup of Credits for BE Degree Curriculum. (I to VIII Semester) Sem I II III IV V VI VII VIII Total HSS BS ES 06 20 24 03 06 15 12 04 36 09 33 PSC Professional Electives Other Electives Project / Seminar/ Internship Total Credits 50 14 13 21 18 18 84 03 06 03 03 15 03 03 14 14 Course Component Humanities and Social Sciences Basic Sciences (Mathematics, Physics, Chemistry) Engineering Sciences (Materials, Workshop, Drawing, Computers) Professional Subject Core Professional Electives, relevant to the chosen specialization branch Elective Subjects, from other technical and / or emerging subject Areas Project Work, Seminar and / or Internship in industry or elsewhere 26 26 24 24 24 26 200 Abbreviation HSS BS ES PSC Prof. Elective Other Elective Project/Seminar Credits % 7.5 18.0 16.5 42.0 7.5 1.5 7.0 Different stakeholders and their interactions contributed for establishment of outcome based education. Institute Vision and Mission Feedback Faculty Programme Educational Objectives Student Programme Outcomes Alumni Employer/Industr y Department Vision and Mission Graduate Attributes Statutory bodies such as UGC, AICTE, VTU Professional bodies such as IBE & ASABE Also GATE Board of Studies for the Term 2015-2016 1. Head of the Department concerned (Chairman, BOS) 2. At least four faculty members at different levels covering different specializations nominated by the Academic Council 3. Special invitees: 1) Two experts in the subject from outside the college 2) One expert from outside the college, nominated by the Vice Chancellor 3) Two representative from industry/corporate sector allied area relating to placement nominated by the Academic Council 4) One postgraduate meritorious alumnus to be nominated by the Principal Sl. No. 1 Name Members of Board of Studies for the year 2015-16 Institution & Address Dr. Channarayappa 2 Dr. Shivaprakash MK 3 Dr. B S Gowrishankar 4 Dr. Nagendra HG 5 Dr. Venkata Ranganna 6 Dr. Manjunath Ramarao 7 Dr. Bindu S 8 Dr. Chandra Prabha MN 9 Dr. P Dhamodhar 10 Dr. Sharath R Prof. & Head, Dept. of Biotechnology, MSRIT, Bangalore. Mob: 9449425111 Professor and Head, Department of Microbiology, University of Agricultural Sciences, GKVK Campus, Bengaluru 560065 Mob: 9845838359 Prof. & Head , Dept. of Biotechnology, SIT, Tumkur, Mob: 9844461940 Professor and Head of Biotechnology, Sir M Visvesvaraya Institute of Technology, Krishnadevaraya Nagar, Hunsamarnahalli, via Yelahanka, Bangalore-562157 Mob: 9916303565 Lead Scientist, M/s. Connexious Life Sciences Pvt. Ltd.,Bangalore-78,Mob: 9844117742 Email: marikunte@yahoo.com Group Director and Head, Biocon-BristolMyers Squibb India Ltd. Biocon-Park, IV Phase Bommasandra, Bangalore-560099 Mob: 9845238679 email: Associate Professor, Dept. of Biotechnology, MSRIT, Bangalore. Mob: 9448704641 Associate Professor,Dept. of Biotechnology, MSRIT, Bangalore, Mob: 9845785174 Associate Professor,Dept. of Biotechnology, MSRIT, Bangalore, Mob: 9880341651 Asst. Professor,Dept. of Biotechnology, MSRIT, Bangalore, Mob: 9845884959 Chairman / Member Chairman Member (Other Institutions) Member (Other Institutions) Member (VTU Nominee) Member (Industry) Member (Industry) Member Alumnus Member Member Member SCHEME OF TEACHING FOR THE ACADEMIC YEAR 2015 – 2016 Sl. No 1 2 3 4 5 6 7 8 9 Sl. No 1 2 3 4 5 6 7 8 9 Subject Code BTMAT301 BT302 BT303 BT304 BT305 BT306 BT307L BT308L BT309L Subject Code BTMAT401 BT402 BT403 BT404 BT405 BT406 BT407L BT408L BT409L *L – Lecture, Subject Title Numerical & Mathematical Biology Unit Operations Bioprocess Principles & Calculations Biochemistry Microbiology Cell Biology & Genetics Unit Operations Lab Biochemistry Lab Microbiology Lab Total Subject Title Biostatistics & Biomodeling Heat & Mass Transfer Bioanalytical Techniques Biochemical Thermodynamics Molecular Biology Human Physiology Heat & Mass Transfer Lab Bioanalytical Techniques Lab Molecular Biology Lab Total T – Tutorial, P- Practicals III SEMESTER Teaching Dept. L Mathematics 4 BT 3 BT 3 BT 4 BT 4 BT 3 BT 0 BT 0 BT 0 21 IV SEMESTER Teaching Dept. L Mathematics 4 BT 3 BT 4 BT 3 BT 3 BT 3 BT 0 BT 0 BT 0 20 T 0 0 1 0 0 1 0 0 0 2 T 0 1 0 1 1 0 0 0 0 3 Credits* P 0 0 0 0 0 0 1 1 1 3 Total 4 3 4 4 4 4 1 1 1 26 Credits* P 0 0 0 0 0 0 1 1 1 3 Total 4 4 4 4 4 3 1 1 1 26 Contact hours Classification 4 3 5 4 4 5 2 2 2 31 BS PSC PSC BS BS PSC PSC PSC PSC Contact hours Classification 4 5 4 5 5 3 2 2 2 32 BS PSC ES ES PSC PSC PSC PSC PSC Sl. No. 1 2 3 4 5 6 7 8 9 Sl. No. 1 2 3 4 5 6 7 8 9 Subject Code BT501 BT502 BT503 BT504 BT505 BTPE BT506L BT507L BT508L Immunology Agricultural Biotechnology Bioinformatics Structural Biology Genetic Engineering Elective – A Immunology Lab Bioinformatics Lab Genetic Engineering Lab Total Subject Code BT601 BT602 BT603 BT604 BTPE BTPE BT605L BT606L BT607L *L – Lecture, Subject Subject Enzyme Technology Upstream Process Technology Bio-reaction Engineering Genomics and Proteomics Elective - B Elective – C Enzyme Technology Lab Upstream Process Technology Lab Bio-reaction Engineering Total T – Tutorial, P- Practicals V SEMESTER Teaching Dept. L BT 3 BT 3 BT 3 BT 3 BT 3 BT/ChE/CSE 3 BT 0 BT 0 BT 0 18 T 0 0 1 1 1 0 0 0 0 3 Credits* P 0 0 0 0 0 0 1 1 1 3 VI SEMESTER Teaching Credits* Dept. L T P BT 3 1 0 BT 3 0 0 BT 3 1 0 BT 4 0 0 BT 3 0 0 BT 3 0 0 BT 0 0 1 BT 0 0 1 BT 0 0 1 19 2 3 Total 3 3 4 4 4 3 1 1 1 24 Total 4 3 4 4 3 3 1 1 1 24 Contact Hours Classification 3 3 5 5 5 3 2 2 2 30 PSC PSC PSC PSC PSC PSE PSC PSC PSC Contact Hours 5 3 5 4 3 3 2 2 2 29 Classification PSC PSC PSC PSC PSE PSE PSC PSC PSC Electives - A Sl. No. 1 2 3 Subject Code BTPE01 BTPE02 BTPE03 Subject Programming in JAVA & C++ Environmental Biotechnology Transport Phenomena Teaching Dept. BT/CSE BT BT/ChE 1 2 3 BTPE04 BTPE05 BTPE06 Microbial Biotechnology Animal Biotechnology Biomaterials BT BT BT 1 BTPE07 BT 2 3 BTPE08 BTPE09 Advance programming using CAD & MAT Lab Food Biotechnology Research Methodology *L – Lecture, T – Tutorial, P- Practicals BT BT L 3 3 3 T 0 0 0 Electives – B 3 3 3 Electives – C 3 3 3 Credits* P 0 0 0 Total 3 3 3 Contact hours 3 3 3 Classification PSE PSE PSE 0 0 0 0 0 0 3 3 3 3 3 3 PSE PSE PSE 0 0 3 3 PSE 0 0 0 0 3 3 3 3 PSE PSE Sl. No. 1 2 Subject Code BT701 BT702 3 4 5 6 7 8 BT703 BT704 BT705 BTPE BT706L BT707L Sl. No. Subject Code 1 2 3 1 BTPE10 BTPE11 BTPE12 BTOE01 *L – Lecture, Subject Bioprocess Control & Automation Downstream Process Technology & Bioseparation Techniques Pharmaceutical Biotechnology Bioprocess Equipment Design IPR Elective – D Bioprocess Control & Automation Lab Downstream Process Technology Lab Total Subject Forensic Science Tissue Engineering Medical Biotechnology Principles of food processing & preservation T – Tutorial, P- Practicals VII SEMESTER Teaching Dept. L BT 3 BT 3 BT BT BT BT BT BT Credits* T P Total 1 0 4 1 0 4 4 0 0 3 1 0 3 0 0 3 0 0 0 0 1 0 0 1 19 3 2 ELECTIVES Teaching Credits* Dept. L T P Elective – D BT 3 0 0 BT 3 0 0 BT 3 0 0 Other Institutional Electives (OIE) BT 3 0 0 Contact hours 5 5 Classification PSC PSC 4 4 3 3 1 1 24 4 5 3 3 2 2 29 PSC PSC HSS PSE PSC PSC Classification Total Contact hours 3 3 3 3 3 3 PSE PSE PSE 3 3 OIE VIII SEMESTER Sl. No. 1 Subject Code BT801 Subject Bioethics and Biosafety 2 BT802 Plant design, Economics and Entrepreneurship 3 OIE 4 5 BT804 BTPE Other institutional elective Project work Elective -E Teaching Dept. BT L 3 Credits* T P 0 0 BT 3 0 Other Depts. BT BT 3 0 3 12 Total Contact hours Classification Total 3 3 HSS 0 3 3 HSS 0 0 3 3 OIE 0 0 0 14 0 14 14 3 26 28 3 40 PW PSE 0 0 0 0 0 0 3 3 3 3 3 3 PSE PSE PSE ELECTIVE-E 1 2 3 BTPE13 Drug Design and Development BTPE14 Nano Biotechnology BTPE15 Operations Research & Management *L – Lecture, T – Tutorial, P- Practicals BT BT BT 3 3 3 Sub Code Credits BIOPROCESS CONTROL AND AUTOMATION : BT 701 CIE : 50 Marks : 3:1:0 SEE : 50 Marks Prerequisite: Bioreaction Engineering Course Coordinators: Mr. Gokulakrishnan & Dr Chandraprabha MN Course Objectives: this course will provide: 1. To study the biochemical instrumentation and estimation techniques of process parameters. 2. To study the process dynamics of first order, second order and first order system in series 3. To study the integration of individual components into a closed loop control system and the effects of components and variables on the controller response. 4. To study the concept of stability of control systems and factors affecting them. Course content: UNIT-1 Introduction: Monitoring and control of bioreactors, Biochemical Reactor Instrumentation, physical, chemical and bio-chemical parameters, Introduction to flow, pressure, temperature, pH, foam, DO, redox and level measurements, sensors for medium and gases. Online and offline measurements of cells, substrates and products, Process modeling, state and parameter estimation techniques for biochemical process. UNIT-2 Systems and Process Dynamics: Process characteristics, I order system-examples, mercury in glass thermometer, level, mixing. Linearisation, I order system in series, interacting and non-interacting systems. Second order system with under damping, derivation of transfer function for various systems, dead time, response of I and II order over damped and under damped systems, to step, ramp, impulse (pulses) and sinusoidal changes. Numericals UNIT-3 Controllers and Final Control Elements: Controllers-discontinuous and continuous, two position control, proportional, derivative, integral control; proportional Reset (integral) (P+I); proportional +rate (derivative (P+D); proportional+reset+rate controller (PID), actuators, positioners, valve body, valve plugs, Valve characteristics, final control elements. Transfer functions for controllers and final control element, numerical. UNIT-4 Transient Response of Closed Loop Systems: Block diagram reduction, block diagram & Transfer functions for servo and regulator problems. Transient response of I and II order processes for set point changes and load changes with proportional, PI, PD and PID controllers, numericals. UNIT-5 Stability of Closed Loop Control Systems Concepts of stability, stability criteria, Routh test for stability, Root-locus method, Bode plots and stability criteria, tuning of controllers, numericals. Text Books: 1. Donald R. Coughanowr (2013) Process Systems Analysis and Control, Mcgraw-Hill, 3rd ed., 2. Pauline MD (2009) Bioprocess engineering principles, Reed Elsevier India. Reference Books: 1. Bailey and Ollis (2010) Biochemical engineering fundamentals. McGraw Hill (2nd Ed) 1 2. Shuler and Kargi (2002) Bioprocess engineering, 2nd ed., Prentice Hall. 3. Tarun K Ghosh (ed.) (1984) Biotechnology and bioprocess engineering: Proceedings, VII international biotechnology symposium. Delhi. 4. Wankat PC (2005) Rate controlled separations, 1st ed., Springer. 5. George Stephanopoulous (2009) Chemical process control 1st ed., Prentice Hall of India. Indirect Assessment Methods CIE Assignment Surprise Test/ Quiz SEE Direct Assessment Methods Assessment and Evaluation vis-à-vis Course Outcomes: What To When/ Where Max whom (Frequency in marks the course) Thrice(Average Internal of the best two assessment 30 will be tests computed) End of course survey Students Contributing to Course Outcomes Blue books 1,2,3&4 Assignment reports Blue books/Quiz answer sheets Once 10 Once 10 End of course (Answering 5 of 10 questions) 100 Answer scripts 1,2,3&4 End of course - Questionnaire --- Students Standard examination Evidence collected 1&4 2,3&4 Course Outcome: On completion of this course student will have improved ability:1: Determine the parameters to be measured and controlled in the bioreactor. 2: Predict the response of first order, second order and first order system in series for various input change 3: Analyze the different control actions involved in the bioreactor. 4: Evaluate the transient response of first and second order systems for load change and to predict the stability of the system. Mapping of course outcome with program outcome Course Outcomes a b X c X X X X X X X CO1 CO2 CO3 CO4 Program Outcomes d e f g h X i X X X j k 2 DOWNSTREAM PROCESS TECHNOLOGY & BIOSEPARATION TECHNIQUES Sub Code : BT 702 CIE : 50 Marks Credits : 3:1:0 SEE : 50 Marks Prerequisite: Unit operations & Bioanalytical Techniques Course Coordinators: Mr. Samrat K & Dr. Ahalya N Objectives of the course: The course will provide: 1. Introduction to downstream processing, its scope and its applications in product isolation, characterization and purification on large scale, economics of downstream processing. 2. Physiochemical basis of Bioseparation for macromolecules like DNA, Proteins, etc of commercial interest. 3. Role of important unit operations like centrifugation, filtration, precipitation/ extraction, downstream prospective. 4. Final product formulation and finishing operations through crystallization and drying techniques. Course Content: UNIT-1 Role of downstream processing in biotechnology: Role and importance of downstream processing in biotechnological processes. Problems and requirements of bioproduct purification. Economics and downstream processing in Biotechnology. Cost cutting strategies, characteristics of biological mixtures, process design criteria for various classes of bioproducts (high volume, low value products and low volume, high value products), physicochemical basis of bio separation processes. UNIT-2 Primary separation and recovery process: Cell disruption methods for intracellular products, removal of insolubles, biomass (and particulate debris) separation techniques; flocculation and sedimentation, centrifugation and filtration methods. UNIT-3 Enrichment operations: Precipitation methods with salts, organic solvents, and polymers, extractive separations. Aqueous two-phase extraction, supercritical extraction; In situ product removal/integrated bio processing. UNIT-4 Membrane science and technology: Use of membrane diffusion as a tool for separating and characterizing naturally occurring polymers; solute polarization and cake formation in membrane ultra filtration – causes, consequences and control techniques; enzyme processing using ultra filtration membranes; separation by solvent membranes; ultra filtration and reverse osmosis. UNIT-5 Final product formulation and finishing operations: Hybrid Separation Techniques (Membrane chromatography, Electrochromatography, etc). Crystallization – Principles, Nucleation, Crystal Growth – Kinetics, crystallization of proteins. Drying and lyophilization in final product formulation. Text Books: 1. Scopes R.K (1993) Protein Purification, IRL Press. 2. Upadhyay, Upadhyay, and Nath (2003) Biophysical Chemistry Principles and techniques, Himalaya Publishing House. 3. Sivasankar B (2005) Bioseparations: Principles and Techniques, Eastern Economy Edition. 3 Reference Books: 1. Wankat PC (1990) Rate controlled separations Elsevier 2. Belter PA and Cussier E (1985) Bioseparations, Wiley 3. Product Recovery in Bioprocess Technology - BIOTOL Series, VCH, 1990 4. Asenjo J and Dekker M(1993) Separation processes in Biotechnology 5. Okotore RO (2002) Basic Separation Techniques in Biochemistry, New age publishing Co. 6. Robert K. Scopes (ed.) (2004) Protein purification principles and practice, Springer International 7. Simon Roe (2006) Protein purification Techniques (2nd Edn) Oxford University Press. Assessment and Evaluation vis-à-vis Course Outcomes: Indirect Assessment Methods CIE To whom When/ Where Max (Frequency in marks the course) Thrice(Average of the best two 30 will be computed) Internal assessment tests Assignment Surprise Test/ quiz SEE Direct Assessment Methods What End of course survey Students Contributing to Course Outcomes Blue books 1,2,3&4 Once 10 Assignment reports 4&5 Once 10 Quiz answers 2,3&4 End of course (Answering 5 of 10 questions) 100 Answer scripts 1,2,3&4 End of course - Questionnaire --- Students Standard examination Evidence collected Course Outcome: On completion of this course student will have improved ability to: 1: Apply downstream processing economics for product development. 2: Identify appropriate unit operations based on nature of biomolecules or complex bioprocess parameters. 3: Apply appropriate unit operation for isolation, purification and characterization of bioproduct. 4: Evaluate different unit operations for product crystallization and Drying. Mapping of course outcome with program outcomes Course Outcomes 1 2 3 4 a b c X X X X X X d X X X X Program Outcome e f g h i j k X X X X 4 Sub Code Credit PHARMACEUTICAL BIOTECHNOLOGY : BT 703 CIE : 4:0:0 SEE : 50 Marks : 50 Marks Prerequisite: Nil Course Coordinators: Mr. Lokesh K N and Dr. Dhamodhar Objectives of the course: The course will provide: 1. Introduction Pharmaceutical biotechnology it scope. Drug development process of protein of peptide based therapeutics & and some important aspects of drug discovery and important regulatory affairs. 2. In depth information about protein or peptide based therapeutics in immune therapy, different Hemopoeitic conditions, cancer etc. 3. Exploring the novel area of biopharmaceutical like controlled drug delivery systems/ Novel drug delivery. 1. Essential information regarding formulation of biopharmaceutical in order to enhance their self life/ Pharmacodynamics/ pharmacokinetic properties. Course Content: UNIT-1 Introduction to Pharmaceutical Biotechnology: scope, Development of drugs and pharmaceutical industry-organic therapeutic agent’s uses and economics, regulatory bodies, introduction to drugs and cosmetics act, overview and important schedule C and C1, schedule M, Schedule Y. UNIT-2 Pharmacokinetics and Pharmacodynamics: Introduction to pharmacokinetics and pharmacodynamics, Drug metabolism- half-life of drugs, physico chemical principles, Biotransformation/pharmacokinetic studies, elimination and distribution of protein therapeutics, pharmacodynamics principles. UNIT-3 Recent Advances in Pharmaceutical Biotechnology: Introduction to nutraceuticals, edible vaccines, Introduction to Health Bioinformatics, pharmacogenomics. Commercially available important diagnostic kits, diagnostic kits for detection of blood sugar, HIV, Malaria etc, recent advances in diagnostic kits. UNIT-4 Manufacturing Principles: Manufacturing facilities, Clean room concept introduction to recombinant DNA technology and production of important therapeutic biopharmaceutical like haemopoietic growth factors (interleukins, erythropoietin’s), therapeutic hormones (insulin, human growth factor) and blood products. UNIT-5 Formulations of Biopharmaceutical, Analysis and Control: Manufacturing facilities, excipients used in parental formulations, shelf life of protein based pharmaceuticals, delivery of protein ( rate controlled, target specific, site specific, soluble carrier system etc) Analytical methods for the tests for various drugs and pharmaceuticals, different packaging techniques, quality control. Textbooks: 1. Industrial Pharmaceutical Biotechnology by Heinrich Klefenz, Wiley-VCH edition.,1995 2. Gary Walsh (1998) Biopharmaceuticals: Biochemistry and Biotechnology. 5 Reference Books: 1. Gregory Bock, Dalia Cohen, Jamie Goode, Novartis and J. Craig Venter (2001) From Genome to Therapy: Integrating New Technologies with Drug Development - No. 229. 2. Susanna Wu-Pong, Yongyut Rojanasakul, and Joseph Robinson (2006) Biopharmaceutical Drug Design and Development. 1. Herbert A Kirst, Wu-Kuang Yeh, Milton J (2001) Enzyme technologies for pharmaceutical and biotechnological applications. Assessment and Evaluation vis-à-vis Course Outcomes: Indirect Assessment Methods CIE To whom When/ Where (Frequency in the course) Max marks Evidence collected Contributing to Course Outcomes Internal assessment tests Thrice(Average of the best two will be computed) 30 Blue books 1,2,3&4 assignment once 10 Assignment reports 2,3&4 Once 10 Quiz answers 1,2,3 End of course (Answering 5 of 10 questions) 100 Answer scripts 1,2,3&4 End of course - Questionnaire Surprise quiz SEE Direct Assessment Methods What Students Standard examination End of course survey Students Course Outcome: On completion of this course student will have improved ability:1: Correlate the importance of Pharmacy with other basic science for development of novel therapeutics and diagnostics. 2: Assess pharmacokinetic and Pharmacodynamic profile of new drug candidates. 3: Apply GMP / GLP guidelines in development or processing of Biopharmaceuticals. 4: Competent to serve in Pharmaceutical Industry/clinical research organization (CRO). Mapping of course outcome with program outcomes Program Outcome Course Outcomes a b c D e f g h 1 x x x 2 x x x x 3 x x x 4 x i x j x k x 6 Sub Code Credit BIOPROCESS EQUIPMENT DESIGN : BT 704 CIE : 50 Marks : 3:1:0 SEE : 50 Marks Prerequisite: Unit operations & Heat and Mass transfer Course Coordinators: Mr. Samrat K & Dr. Chandraprabha MN Course Objectives 1. To study the basics of equipment design concepts and piping design. 2. To study the various aspects involved in pressure vessel and auxiliary components required for vessel design. 3. To study the Design and analysis of bioreactors. 4. To study the Design aspects of heat and mass transfer equipments. Course Content: UNIT-1 Introduction to principles of designing and flow sheet preparation: Nature of design, design factors, degrees of freedom, design variables, optimization, nature of process equipment, general design procedure, basic considerations in design, standards, codes, and their significance, equipment classification and their selection, design pressure, design temperature, design stress, design loads, review of fabrication techniques, economics and environmental considerations in design procedure. Piping design. Materials of construction. Sketching techniques, Equipment symbols, Process Flow sheets. Safety considerations in design. UNIT-2 Pressure vessel design: Design of unfired pressure vessels: Types of pressure vessels, codes and standards for pressure vessels (IS: 2825; 1969) Proportioning of pressure vessels, selection of L/D ratio, optimum proportions of vessels Complete Design as per IS: 2825; 1969 involving shells: cylindrical, spherical. Vessel Component Design: Study, Selection and design of various heads, Opening/ nozzles, and manholes. Gasket, flange and bolt design. Design of Vessel support. UNIT-3 Design of Bioreactors: Overview of bioreactors, basic design equation for bioreactors. Functional design- Based on the type of bioreactor (batch reactor MFR) and cell growth kinetics and performance equation, determination the volume of the reactor, according to H/D ratio determine height and diameter. Mechanical design- Thickness of the shell (cylindrical, spherical), thickness of top & bottom cover, flange calculations – width and thickness of gasket, number of bolts, bolts circle diameter and bolt diameter. Agitator design- diameter of agitator, height of agitator, type of blade and power required (power rating) to run the agitator. UNIT-4 Design of Heat Exchangers: Introduction to heat exchanger, Functional design – Energy balance equation, log mean temperature difference (co-current, counter counter), Heat transfer coefficients (inside, outside & overall), area, length, number of tubes, tube sheet diameter, pitch type, diameter of tube sheet (STHE).Pressure drop calculations. UNIT-5 Design of Distillation column and evaporators: Introduction, reflux considerations, total reflux, minimum reflux, optimum reflux ratio, feed point location, McCabe-Thiele method – procedure, Distillation column design, Plate contactors-Bubble Cap, sieve plate, Valve plates, Diameter of column. Design of Evaporator – Single effect, Numerical problems. 7 Textbooks: 1. Coulson JM, Richardson JF and Sinnott RK (2006) ‘Chemical Engineering Vol. 6 - Design, Pergamon Press. 2. Brownell LE and Young EH (2009) Process Equipment Design - Vessel Design, John Wiley and Sons, Inc. 3. Tapobrata Panda., Bioreactors: Analysis and Design, 1st Edition, Tata McGraw Hill Education Private Limited, New Delhi, 2011. 4. S Thakore, B Bhatt., Introduction to Process Engineering And Design Paperback , McGraw Hill Education (India) Private Limited 2007. Reference Books: 1. Ludwig EE (2010) Applied Process Design for Chemical and Petrochemical Plants, Vol. 1 and 2, 3rd Ed., Elsevier India. 2. Walas SM (1995) Chemical process equipment: selection and design ButterworthHeinemann. 3. Indian standards Institution, Code for unfired pressure vessels, IS – 2825. 4. Bhattacharya BC (2012) Introduction to chemical equipment design, 1st ed., CBS Publications. 5. Joshi MV (2003) Process Equipment Design 3rd ed., Macmillan India. Contributing to Course Outcomes Blue books 1,2,3&4 Assignment Once 10 Assignment reports 2&3 CIE Evidence collected Students Surprise Test/ Tutorial Test Once 10 Blue Books 2&3 SEE Indirect Assessmen t Methods Direct Assessment Methods Assessment and Evaluation vis-à-vis Course Outcomes: What To When/ Where Max whom (Frequency in marks the course) Thrice(Average Internal of the best two assessment 30 will be tests computed) Standard examination End of course (Answering 5 of 10 questions) 100 Answer scripts 1,2,3&4 End of course - Question-naire --- End of course survey Students Course Outcome: On completion of this course students will have improved ability to: 1: Analyze the design concepts. 2: Design the pressure vessel and its auxiliary units as per standard. 3: Analyze the various parameters for bioreactor design. 4: Design various heat and mass transfer equipments. Mapping of course outcome with program outcomes: Program Outcome Course Outcomes a b c d e f g h i j k 1 X X 2 X X X 3 X X X 4 X X X 8 INTELLECTUAL PROPERTY RIGHTS Sub Code: BT705 CIE : 50 Marks Credits : 3:0:0 SEE : 50 Marks Prerequisite: Course Coordinators: Course Objectives: The objectives of this course are: 1. To study the importance of IP in the research and development and differentiate between the various categories of IP protection 2. To study the conceptual and legal framework, and procedural requirements relating to trademarks and copyrights. 3. To develop among students awareness about the patent law in India and spell out the procedural mechanism involved in obtaining a patent besides licensing of patents and compulsory licensing. 4. To discuss the patenting of living organisms Course Content: UNIT-I Introduction to IPR: History of IPR. Need of IP. Globalization, International organization for IP control: GATT, WTO, WIPO & TRIPS. IPR in Research and Development. Introduction to different forms of IPR: Copyrights, Trademarks, Industrial designs, patents, Geographical Indications, Traditional Knowledge, Plant varieties, Trade Secrets. UNIT-II Trade Marks: Nature, Essentials, Protection, Trademarks, Service marks and Laws. Procedure for trade mark registration, Case Studies on Trademarks: Related to Biotechnology and allied industries. Copy Right: Characteristics and Requirements; Copyright law in India Subject matter of copyright Neighboring rights, Procedure for copyright registration, Ownership; Infringement of Copyright. Case Studies on Copyrights: Related to Biotechnology and allied industries. UNIT-III Patents: patent as an intellectual property, Brief history of patents-Indian and global scenario, Principles underlying Patent law. Patentable Subject Matter, Patent is a Negative Right, infringement of patents, patent life cycle, Beneficiaries of Patents patent granting authority, literature scanning for possibility of IP rights, decision to go for IP protection or not, and consideration of choice of IP protection, disclosure, inventors interview, Process and Product Patents. Ideas: Generation and review of ideas, documenting ideas, UNIT-IV Patent application procedure & drafting Patent Drafting: Filing requirements. Patent application Indian and global scenario, types of patent and patent application application, Patents and Patent search, invention record, public disclosure, Processing of Patent application, Patent Drafting, Patent Examination Patent Co-operation Treaty Patent attorney and Agent. patent prosecution, patent Revocation. Cost of getting and maintaining patents – in India, US and other countries, role of patent agents and attorneys, possibility of IPR as a career. Case studies Related to Biotechnology and allied industries. UNIT-V Origins of patent law in biotechnology, Bio-piracy: case study, Diamond versus Anand Chakra borty etc. Patenting biotech products. Complex issues, moral issues, current patent practice and necessity of clear guidelines in biotechnology patent law, examples, National Biodiversity protection initiatives; 9 Convention on Biological Diversity; International Treaty on Plant Genetic Resources for Food and Agriculture; Commercial Potential of Biotech Inventions Patenting Biotechnological inventions. Microorganisms, Plant Varieties Protection and Protection of Traditional Knowledge Text Books: 1. Acharya NK (2007) Text book on Intellectual Property Rights, Asia Law house, 4th edn. 2. Deborah E Bouchoux,(2005) Intellectual Property Rights, Delmar Cengage learning 3. Patent Fundamentals for Scientists and Engineers, Thomas T Gordon and Arthur S Cookfair, CRC Press (1995). Reference Books: 1. Wadehhra BL (2002) Intellectual Property Law Handbook, Universal Law Publishing Co. Ltd. 2. Prabuddha Ganguli (2001) Intellectual Property Rights, TMH Publishing Co. Ltd., 3. Manish Arora (2007) Guide to Patents Law, Universal Law Publishing, 4th Ed. 4. Singh K (2000) Intellectual Property Rights on Biotechnology. BCIL, New Delhi. 5. Intellectual Property Laws (Bare Act with short comments), Professional Book Publishers, 2007 6. Channarayappa (2006) Molecular Biotechnology: Principles and Practices University Press, India. Worldwide publishing: CRC Press. 7. Anonymous (2006) The Patents Act, 1970 (Bare Act with Comments) as amended by Patents (Amendment) Rules 2006 w.e.f. 5-5-2006, Commercial law Publishers (India) Pvt. Ltd.. 8. Anonymous (2006) Course materials of “Advanced Training Programme on Management of Intellectual Property Rights In Biotechnology for Small and Medium Sized Enterprises’ conducted by WIPO and BCIL in Bangalore during 5-7. Ass ess me CIE Max marks Evidence collected Contributing to Course Outcomes 30 Blue books 1,2,3&4 Twice( Average of the two will be computed) 10 Assignment reports 1,2,3&4 Once 05 Case solutions 1,2,3&4 Surprise quiz Once 05 Quiz answers 1,2,3&4 Standard examination End of course (Answering 5 of 10 questions) 100 Answer scripts 1,2,3&4 End of course - Questionnaire 1,2,3&4 Class-room open book assignment Case analysis SEE Direct Assessment Methods Assessment and Evaluation vis-à-vis Course Outcomes: When/ Where To What (Frequency in the whom course) Internal Thrice(Average of assessment the best two will tests be computed) End of course survey Students Students 10 Course Outcomes: At the end of this course, students should be able to: 1. Identify the different types of IP and scope of protection, and discuss the role of the international intellectual property rights system 2. Distinguish the key differences between trade mark and copy right and conversant with the procedures used to protect copyright and trademark. 3. Apply the procedure involved in drafting patent application and identify activities that constitute patent infringement and discuss the remedies available to the patent owner 4. Discuss the crucial role of IP in biotechnological organizations for the purpose of product and technology development Mapping of course outcome with program outcomes Course outcome 1 2 3 4 a b c d Program Outcome e f g h X X X X X X X X X X i X j X X k X X X 11 Sub Code Credits FORENSIC SCIENCE : BTPE10 CIE : 50 Marks : 3:0:0 SEE : 50 Marks Prerequisite: Biochemistry Course Coordinators: Dr. Sharath, R. and Mr. Samrat K Course Objectives: 1. To know the importance, scope and Different laboratory services in of forensic Science. 2. Understand the concept criminalistics, investigation procedure and evidence collection. 3. To know the different areas and their duties and importance of digital photography and ethics. 4. Understand the necessary theoretical and practical background in all the primary areas of criminalistics for a career in forensic science. Course Content: UNIT-I INTRODUCTION: Introduction, Definition and Scope, History and Development of Forensic science, basic Principles of Forensic Science. Organization of crime Laboratory services, services provided by full service crime laboratories, Physical Science unit, Biological Unit, Firearms Unit, Documentation Examination Unit- Function and Duties Performed by each unit and lab. UNIT-2 FORENSIC CRIMINALISTICS in forensic science, The Crime Scene investigation- Making and recording observations (including sketches with measurements and digital photographs), Chain of Custody, Locard Exchange principle, Evidences and Collection techniques, Firearms, Trace evidence and contact evidence- targeting potential traces, recovery of trace material assessment of significanceHair, fiber and Paint. Marks and impressions, Drug of abuse. Ploygraphy. UNIT-III FORENSIC BIOLOGY: Forensic Pathology: Rigor mortis, Lovor mortis, Algor mortis. Forensic Anthropology, Forensic Toxicology- Alcohol & it relationship to human anatomy & metabolism, Testing for drugs and poisons using pH. TLC, immunoassay, & chemical tests, Forensic Entomology, Forensic Psychiatry, Forensic Odontology, Forensics Engineering, forensic serology, Wild Life forensic, DNA Analysis, Dactyloscopy, Finger prints: history, fundamental principle of Fingerprints, Classification and patterns, AFIS, Mrthod of Detecting fingerprint. UNIT-IV FORENSIC DIGITAL IMAGING: Introduction, Digital cameras and forensic imaging, image acquisition technique. Methods and applications, Authenticity, image processing. Technical investigation on image storage media. Digital image processing- sharpening, contrast, blur soomthing, digital videos and scanners, presenting pictures in courtroom, internet crime. Forgery and stegnography, Voice analysis. Detecting compression and forgeries and Maintaining Records, Hand Writing analysis. Computerized facial reconstruction. UNIT-V FORENSIC ETHICS: Introduction and importance of Professional ethics in Forensic Science, organizational forensic Science ethics, Code of ethics in Forensic Science Practice. Standard for Good Forensic practice. Ethical problems in ethical forensic sciences. Ethical Dilemmas Text Books: 1. Jay Siegal, Geoffrey Knuper, Pekku Saukko (2000): Enyclopedia of Forensic Sciences, Threevolume SET1-3, Elsvier book publication. 12 2. Max M. Houck (2007): Forensic Science: Modern methods of solving problems, Praeger West Port London, 3. Ayn Embar-Seddon, Allan D. Pals (2009): Forensic Science, Salem Press, Inc. Paradena, California 4. Jami J. St Clair (2002): Crime Laboratory Management- Academic Press. Reference Books: 1. Richard Saperstein(2001): Criminalistics: An Introduction to Forensic Science –Prentice Hall,.2 2. David Ellen (2003): The Scientific Examination of Documents Methods and Techniques-, Taylor and Francis. Indirect Assessmen t Methods CIE Max marks Evidence collected Contributing to Course Outcomes Internal assessment tests Thrice(Average of the best two will be computed) 30 Blue books 1,2,3 &4 Class-room open book assignment Twice( Average of the two will be computed) 10 Assignment reports 1,2,3 &4 Once 05 Case solutions 1,2,3 &4 Surprise quiz Once 05 Quiz answers 1,2,3 &4 Standard examination End of course (Answering 5 of 10 questions) 100 Answer scripts 1,2,3 &4 End of course - Questionnaire 1,2,3 &4 Case analysis SEE Direct Assessment Methods Assessment and Evaluation vis-à-vis Course Outcomes: What To whom When/ Where (Frequency in the course) End of course survey Students Students Course Outcomes: on completion of this course students will 1: Apply the principles of instruction to generate competent, credible forensic scientists. 2: Influence the development of forensic science end-to-end service delivery policies in relation to scientific quality. 3: Evaluate the professional codes of ethics outlined by various professional forensic science organizations. 4: Formulate a complete and logical plan for data analysis in forensic science research Mapping of course outcome with program outcomes Program Outcome Course outcome a b c d e f g h 1 X X X 2 X X X 3 X X X 4 X X i j k X X X 13 Sub Code Credits TISSUE ENGINEERING : BTPE11 CIE : 50 Marks : 3:0:0 SEE : 50 Marks Prerequisite: Cell biology Course Coordinators: Dr. Prabha M Course Objectives: The course will provide knowledge on: 1. The study of development, properties and characterization of the cell. 2. The adhesion properties and functions of ECM Molecules in applications of tissue engineering. 3. The mechanism of drug delivery and Biomaterials Polymeric scaffolds maintain differentiated function of the cell. 4. Clinical & Regulatory Aspects of Engineered Tissues of different cell types. Course Content: UNIT-I Cell and Tissue Biology: Introduction to cell – biology and biochemistry. Tissue development and organization. Stem cells (embryonic), Stem cells (adult). Introduction to cell adhesion, Adhesion Receptors in Tissue Structures, Cell Adhesion to Biomaterials, Measurement of Cell Adhesion, Effect of Biomaterial on Physiological Behavior. Introduction to cell migration, Characteristics of Mammalian Cell Migration, Regulation of Cell Movement, Cell Migration Assays, Mathematical Models for Cell Migration and Tissue Growth. UNIT-II Extracellular Matrix: Introduction, ECM and Functional Integration of Implanted Materials, Basement Membranes and Focal Adhesions, Focal Adhesions as Signaling Complexes, ECM and Skeletal Tissues, Sources of ECM for Tissue Engineering Applications, Properties of ECM , Mining the ECM for Functional Motifs, Summary of Functions of ECM Molecules, Polymeric Materials and their Surface Modification, Formation of Gradient Structures, Delivery of Growth Factors. UNIT-III Biomaterials & Drug Delivery Systems: Introduction to synthetic polymers, Biodegradable materials vs permanent materials, Natural biopolymers and hydrogels, Mechanical properties of biomaterials, Surface modification and characterization of polymers, Immune response to biomaterials, In vitro assessment/biocompatibility/protein adsorption. Polymeric scaffolds for tissue engineering applications. Drug delivery, Mechanisms of Drug Delivery, Protein-Drug Properties, Drug Delivery in Tissue Engineering, Introduction to growth factors, Polymer scaffold delivery systems, Polymer hydrogel delivery systems, Polymer microsphere technology. UNIT-IV Tissue Engineering Bioreactors - Design and Fabrication: Introduction, Most common Bioreactors in Tissue Engineering, Cell Seeding in Bioreactors, Bioreactor Applications in Functional Tissues, Design Considerations, Challenges in Bioreactor\ Technologies. Tissue Biomechanics, Scaffold design and fabrication, Natural Polymers for Scaffold Fabrication, Synthetic Polymers for Scaffold Fabrication, Scaffold Design Properties. UNIT-V Clinical & Regulatory Aspects of Engineered Tissues: Tissue Engineering of Skin, Bone Tissue Engineering, Cartilage Tissue Engineering, Neuronal, Tissue Engineering, Cardiovascular Tissue Engineering, Musculoskeletal Tissue Engineering, (tendon/ligament/muscle), Adipose Tissue Engineering. Introduction, FDA Regulation, Regulation of Pharmaceutical / Medical Human Tissue Products in Europe, Regulation of Pharmaceutical / Medical Human Tissue Products in Japan, Other considerations Relevant to Engineered Tissues. 14 Text Books: 1 John P. Fisher, AG Mikos & Joseph D. Bronzino (2007) Tissue Engineering CRC Press. 2. Anthony Atala & P Lanza (2006) Methods of Tissue Engineering, Academic Press Elsevier 3. Drioli, Taylor & Francis (2005), Biocatalytic Membrane Reactor Reference Books: 1. Channarayappa (2010) Cell Biology: Universities Press (India) Pvt Ltd. 2. Patrick CW, Mikos AG, McIntire LV (1998) Frontiers in Tissue Engineering, Pergamon Press. 3. Bernhard O Palsson, Sangeeta N Bhatia (2003) Tissue Engineering, Pearson Prentice Hall. Max marks Evidence collected Internal assessment tests Thrice(Average of the best two will be computed) 30 Blue books Class-room open book assignment Twice( Average of the two will be computed) 10 Assignment reports Surprise quiz Once 10 Quiz answers Standard examination End of course (Answering 5 of 10 questions) 100 Answer scripts End of course - Questionnaire Contributing to Course Outcomes Indirect Assessment Methods SEE CIE Direct Assessment Methods Assessment and Evaluation vis-à-vis Course Outcomes: What To whom When/ Where (Frequency in the course) End of course survey Students Students Course Outcome: On completion of this course student will have improved ability:1: Identify and differentiate between various stages of tissue development & stem cells 2: Analyze the mechanism and organization of ECM and its functions 3: Apply knowledge of drug delivery mechanism & protein drug interactions 4: Integrate the knowledge of clinical and regulatory aspects on different engineered tissues in pharmaceutical and medical human tissue products. Mapping of course objectives with program outcomes Course objective 1 2 3 4 a X X X X b X X c d X X X X Program Outcome E f g X X X X X X X X H i j x k X X 15 MEDICAL BIOTECHNOLOGY Sub Code : BTPE12 CIE : 50 Marks Credits : 3:0:0 SEE : 50 Marks Prerequisite: Biochemistry Course Coordinators: DR. Prabha M and Mr. Lokesh K N Objectives of the course: The course will provide knowledge on: 1. The study the diseases causing from microbes and its detection, production of vaccines and its types. 2. The scope and importance of ESC, Hemopoeitic Stem Cells and its Disorders. 3. The types of diagnosis and its significance in medical Biotechnology. 4. The current applications of biotechnology in Medicine for gene therapy to demonstrate high standards for treatment of cancer, genetic and other diseases. Course Content: UNIT-I Introduction & Stem Cells in Health Care: Introduction to Medial Biotechnology, scope and applications, List of disease causing microbes and detection. Mammalian embryonic stem cells – Definition, formation and properties of embryonic stem cells. Formation of differentiated cells from stem cells. Differentiated progeny, epidermal stem cells in basal layer, differentiating epidermal cells, synthesis of differentiating epidermal stem cells- a subset of basal cells, basal cell proliferation, secretory cells in the epidermis. UNIT-II Hemopoietic Stem Cell Disorder: Classification and manifestations of Hemopoeitic stem cell disorders, a plastic Hemopoietic stem cell disorders, clinical applications of colony stems, complications of germ therapy, replacement therapy and bone marrow transplantation, immunological principles, preservation and clinical use of blood and blood components. UNIT-III Vaccine Technology: Definition, history, classification of vaccines, preparation and standardization of vaccines, cancer vaccine, birth control vaccines, AIDS vaccine, Pneumococcal vaccine, measles vaccines, Future development and scope of vaccines. UNIT-IV Diagnostics: PCR bases diagnosis, Southern blot-based diagnosis DNA sequencing of representative clones to detect mutation(s), PCR-SSCP to detect SNP analysis for known SNPs, PAGE: Immunodiagnostics, DNA fingerprinting. UNIT-V Gene Therapy: General introduction, potential target diseases for gene therapy, gene transfer methods, and their applications, clinical studies, pharmaceutical production and regulation. Text Books: 1. Daan Crommelin, Robert D sindelar (1998) Pharmaceutical Biotechnology an Introduction for pharmacists and pharmaceutical scientists, 2nd edition. 2. Willam irving, Time Boswell, Dlawar (1995) Instant notes, Medical Microbiology. 3. Sambamurthy (1994) Text book of Pharmaceutical Biotechnology, 3rd edn. Reference Books: 1. Judit Pongracz, Mary Keen (2009) Medical Biotechnology, A Churchill Livingstone publication. 2. Albert Sasson, (2006) Medical Biotechnology, Brookings Institution Press. 16 Indirect Assessment Methods CIE SEE Direct Assessment Methods Assessment and Evaluation vis-à-vis Course Outcomes: What To whom When/ Where (Frequency in the course) Max marks Evidence collected Contributing to Course Outcomes Internal assessment tests Thrice(Average of the best two will be computed) 30 Blue books 1,2,3&4 Class-room open book assignment Once 10 Assignment reports 1,2,3&4 Surprise quiz Once 10 Quiz answers 1,2,3&4 Standard examination End of course (Answering 5 of 10 questions) 100 Answer scripts 1,2,3&4 End of course - Questionnaire assessment methods End of course survey Students Students Course Outcome: On completion of this course student will have improved ability:1. To detect the disease causing microbes for diagnosis, production of vaccines in prevention and treatment of diseases. 2. To understand the benefits and scope of Embryonic stem cells, Hemopoietic stem cells for therapeutics and transplantation. 3. To apply the techniques such as PCR, Southern blot, PAGE, DNA finger printing for analysis and diagnosis. 4. To analyze the gene transfer methods and pharmaceutical production for application of gene therapy and treatment. Mapping of course outcome with program outcomes Program Outcome Course a b c d e f g H outcome 1 X X 2 X X X 3 X X 4 X X i j k X X X X 17 PRINCIPLES OF FOOD PROCESSING & PRESERVATION Sub Code : BTOE01 Credits : 3:0:0 CIE : 50 Marks SEE : 50 Marks Prerequisite: None Course Coordinator: Dr Bindu S Objectives of the course: 1) This open elective course introduces the students of all branches of Engineering to the quality attributes of food & factors affecting quality deterioration. 2) Students are introduced to the objectives & principles of food processing as relevant in the food industry. 3) Provides an understanding of the principle, application, advantages & disadvantages of conventional methods of food preservation like low temperature, high temperature, dehydration etc. 4) Equips the students with knowledge on some of the restricted methods of food preservation like membrane based separation & irradiation: its potential applications & safety issues. Course Content: UNIT-I Basic consideration: Aim and objectives of preservation and processing of foods, characteristics of food components, primary sources of microorganisms found in foods, deterioration of food quality, causes of quality deterioration and spoilage of perishable foods, spoilage in canned foods UNIT-II Low temperature Preservation of foods: Chilling temperatures: Considerations relating to storage of foods at chilling temperatures, low temperature applications in food preservation, controlled and modified atmosphere storage of foods. Freezing temperature: Preparation of foods for freezing, freezing process, slow and fast freezing of foods and its consequences, storage stability of frozen foods, effect of freezing on microorganisms. UNIT-III High temperature preservation of foods: Basic concepts in thermal destruction of microorganismsD, Z, F, values, Heat resistance and thermophilisms in micro-organisms. Cooking, blanching, pasteurization and sterilization of foods. Assessing adequacy of thermal processing of foods, general process of canning of foods. UNIT- IV Preservation by Dehydration: Principles, technological aspects and applications of drying and dehydration of foods. Principles, technological aspects and applications of evaporative concentration processes, freeze concentration and membrane processes for food concentrations. UNIT-V Other techniques in preservation: Principles, technological aspects and applications of sugar and salt, anti-microbial agents, non-ionizing and ionizing radiations in preservations of foods, Fermented foods. Text Books: 1. Norman N. Potter and Joseph H. Hotchkiss (2006) Food Science, 5th edition, CBS publishers and Distributors 2. B. Sivasankar (2005) Food processing and preservation, Eastern economy edition, Prentice-Hall of India Pvt. Ltd. 3. James M Jay (2005) Modern food microbiology, 4th edition, CBS publishers and Distributors. 18 Reference Books: 1. Shakuntala N. Manay and M. Shadaksharamurthy (2008) Foods: Facts and Principles, 3rd edition, New Age International 2. Rick Parker (2001) Introduction to Food Science, 3rd edition, Cengage learning 3. Subbulakshmi G and Shobha A. Udupi (2006) Food Processing and Preservation, 1st edition, New Age International 4. John M DeMan (1999) Principles of Food Chemistry, 3rd Edition, Springer – Verlag Indirect Assessment Methods CIE Max marks Evidence collected Contributing to Course Outcomes Internal assessment tests Thrice(Average of the best two will be computed) 30 Blue books 1,2,3&4 Assignment Once 10 Assignment reports 1&2 Once 10 Mini Project Reports 3&4 End of course (Answering 5 of 10 questions) 100 Answer scripts 1,2,3 &4 End of course - Questionnaire 1,2,3 &4 Students Mini Project SEE Direct Assessment Methods Assessment and Evaluation vis-à-vis Course Outcomes: What To When/ Where whom (Frequency in the course) Standard examination End of course survey Students Outcome of the course: 1. List & identify the factors responsible for food spoilage including a description of the different types of spoilages. 2. Compare and contrast the different low temperature food preservation methods & discuss their principles. 3. Compare and contrast the different low temperature food preservation methods & discuss their principles. 4. Discuss the applications of dehydration, membrane based separation & irradiation as methods of food preservation. 19 BIOPROCESS CONTROL AND AUTOMATION LAB Sub code Credits : BT 706L : 0:0:1 CIE SEE : 50 Marks : 50 Marks Prerequisite: Bioprocess control & Automation Course Coordinators: Mr.Gokulakrishnan M & Mr. Samrat K Course Objectives: 1. To study the basic control methodologies. 2. To study the response of first order systems for different input changes. 3. To study the response of first order system in series for different input changes. 4. To study the transducer characteristics. Course Content: LABORATORY List of EXPERIMENTS 1. Characteristics of Transducers (Temperature, Pressure, Flow) 2. Dynamics of First order –Thermometer- system for step input 3. Dynamics of First order -Liquid level system - for step input 4. Dynamics of first order systems -Liquid level- for impulse input 5. Dynamics of first order systems-thermometer- for pulse input 6. Dynamics of second order system ( Manometer) 7. Non-interacting systems 8. Interacting systems 9. Control of temperature in a bioprocess. 10. Control of pH in a bioprocess. 11. Control of Pressure in a bioprocess. 12. Control of Flow rates in a bioprocess. 13. Control of level 14. Study of Valve characteristics Note: Any 12 experiments must be performed Reference Books: 1. Bailey and Ollis (2010) Biochemical engineering fundamentals. McGraw Hill (2nd Ed) 2. George Stephanopoulous (2009) Chemical process control 1st ed., Prentice Hall of India. 20 Indirect Assessment Methods CIE SEE Direct Assessment Methods Assessment and Evaluation vis-à-vis Course Outcomes: What To When/ Max whom Where marks (Frequency in the course) Internal assessment tests Evidence collected Contributing to Course Outcomes Once 30 Blue books 1,2,3&4 Continuous 10 Attendance 1,2,3&4 Record Continuous 10 Record 1,2,3&4 Standard examination End of course 50 Answer scripts 1,2,3&4 End of course - Questionnaire ---- Lab Assessment End of course survey Students Students Course Outcomes: On completion of this course student will have improved ability:1: Determine the control parameters 2: Predict the response of first order systems 3: Predict the response of first order system in series 4: Evaluate the transducer characteristics Mapping of course outcome with program outcomes Course Outcomes 1 2 3 4 a b c d X X X X X X X X X X X X e f g h i j k X X 21 DOWNSTREAM PROCESS TECHNOLOGY & BIOSEPARATION TECHNIQUES Sub Code : BT 707L CIE : 50 Marks Credits : 0:0:1 SEE : 50 Marks Prerequisite: Unit operations & Bioanalytical techniques Course Coordinators: Mr. K N Lokesh and Mr. Samrat K Course Objectives: 1. To impart the knowledge of working principles of the bioseparation and purification process 2. Practical knowledge of different methods of product isolation techniques. 3. Practical knowledge of product characterization/ estimation methods Course Content: LABORATORY LIST OF EXPERIMENTS 1. Cell disruption techniques. 2. Solid-liquid separation methods: Sedimentation 3. Solid-liquid separation methods: Centrifugation, Filtration, 4. Product enrichment operations: Precipitation – (NH4)2 SO4 fractionation of a protein. 5. Product enrichment operations: Two – phase aqueous extraction. 6. Protein enrichment by altering the dielectric constant 7. Methods for Cell biomass estimation (Packed cell volume (PCV), Dry weight & wet weight of biomass) 8. Separation of Amino acids / Carbohydrates by TLC. 9. SDS polyacrylamide gel electrophoreSsis 10. DNA separation by Agarose Gel Electrophoresis 11. Estimation of % of ethanol from fermented broth. 12. Estimation of Citric acid from fermented broth. 13. Separation of proteins by molecular sieving. 14. Analysis of biomolecules by HPLC / GC. Note: Any 12 experiments must be performed Reference Books: 1. Upadhyay, Upadhyay, and Nath (2003) Biophysical Chemistry Principles and techniques, Himalaya Publishing House. 2. Sivasankar B (2005) Bioseparations: Principles and Techniques, Eastern Economy Edition. 3. Okotore RO (2002) Basic Separation Techniques in Biochemistry, New age publishing Co. 22 Indirect Assessm ent Methods CIE SEE Direct Assessment Methods Assessment and Evaluation vis-à-vis Course Outcomes: What To When/ Max whom Where marks (Frequency in the course) Evidence collected Contributing to Course Outcomes Internal assessment tests Once 30 Blue books 1,2,3&4 Lab Assesment Continuous 10 Attendance 1,2,3&4 Record Continuous 10 Record 1,2,3&4 Standard examination End of course 50 Answer scripts 1,2,3&4 End of course - Questionnaire End of course survey Students Students Course Outcomes: 1: Choose appropriate unit operations for isolation and purification of biomolecules. 2: Identify appropriate qualitative and quantitative analysis methods depending upon the chemical nature of analyte. 3: Enhance product output by selection of appropriate method of enrichment operation. 4: Enhance product quality by appropriate method of purification operation Mapping of course outcome with program outcomes Program Outcome Course Outcomes a b c d e f g h 1 X X 2 X X X 3 X X X 4 X X X X i j k X X 23 BIOETHICS & BIOSAFETY Sub Code : BT801 Credits : 3:0:0 CIE : 50 Marks SEE : 50 Marks Prerequisite: None Course Coordinator: Dr Bindu S Course Objectives: 1. This course intends to instill awareness in Biotechnology (BT) undergraduates about sensitive & ethical issues connected to BT. 2. Introduces them to the concept of Biosafety & its significance along with international as well as national biosafety regulations as applied to transgenic research. 3. Case studies on transgenics & the ethical issues that crop up during the development of these BT products. 4. Highlights the potential dangers of compromise on biosafety through case studies. Course Content: UNIT-I Introducction to Bioethics and Biosaftey: Needs and definition of Bioethics, Ethical issues in biotechnology. Application of bioethics, the expanding scope of ethics from biomedical practice to biotechnology. Social and ethical issues in Biotechnology, Introduction to Biosaftey, needs and definition of biosaftey, application and levels of biosaftey. Hazards related to Biosafety at work place, development of biotech products. Examples and case studies. UNIT-II Ethical Issues: Ethical issues in genetically modified organisms (foods and crops); bioethics in biodiversity and resource management. Animal cloning and human cloning and their ethical aspects. Testing of drugs on human volunteers, organ transplantation and ethical issues; Xenotransplantion and its ethical and social issues. Human Genome project. UNIT-III Biosafety regulations in transgenic research: National and international guidelines on rDNA protocols. MOEF guidelines evolution, Good laboratory practice, Good manufacturing practice and FDA regulations Pharmacopia standards Regulations for recombinant DNA research and manufacturing process Public perception. National Institute of health (NIH) guideline, guidelines for research in transgenic organisms. Experiments with microorganisms. Canadian Council on Animal Care (CCAC) Guidelines on Transgenic Animals UNIT-IV Case studies in transgenic research: Case studies of GEAC approved projects. Drafting of application to IBSC and procedure. BT cotton, golden Rice, genetic manipulation and ethical considerations. Genetic studies in ethnic races. Recombinant DNA Advisory Committee Advisory Committee (RDAC) UNIT-V Bioethics and biosafety in biotechnology: Ethical issues related to biotech products, Challenges to Indian Biotech Industries and research institutes, Biological weapons CARTAGENA protocol highlights. Examples of Monarch butterfly, HIV vaccine, Starlink maize. Text Books: 1. Traynor PL (2000) Biosafety Management, Virginia polytechnic Institute Publication. 2. Sateesh M.K (2008) Bioethics & Biosafety, IK Publishers. 24 Reference Books: 1. Sassaon A. (1988) Biotechnologies and development. UNESCO Publications. 2. Sasson A. (1993) Biotechnologies in developing countries present and future, UNESCO Publishers. 3. Rao MB (2003), WTO and International Trade, Vikas Publishing House Pvt. Ltd. 4. Erbisch F H and Maredia K M (2003), Intellectual Property Rights in Agricultural Biotechnology, Orient Longman Ltd. 5. Cartagena Protocol on Biosafety, January 2000. 6. Dano MR (1994) Biological Warfare in the 21st century, by, Brassies London. 7. Safety Considerations for Biotechnology (1992 and latest publications), OECD Paris. Indirect Assessme nt Methods CIE Max marks Evidence collected Contributing to Course Outcomes Internal assessment tests Thrice(Average of the best two will be computed) 30 Blue books 1,2,3&4 Assignment Once 10 Assignment reports 1&2 Once 10 Mini Project reports 3&4 End of course (Answering 5 of 10 questions) 100 Answer scripts 1,2,3&4 End of course - Questionnaire 1,2,3&4 Mini Project SEE Direct Assessment Methods Assessment and Evaluation vis-à-vis Course Outcomes: What To When/ Where whom (Frequency in the course) Students Standard examination End of course survey Students Course Outcomes: 1: List & interpret the social, legal & ethical issues connected with BT. 2: Recognize biosafety as relevant to Biotechnology & apply this knowledge in maintenance of biosafety in research lab, field & industry. 3: Analyze & interpret biosafety regulations & their relevant applications in BT. 4: Identify the potential dangers in Biotechnology due to compromise on biosafety & apply precautionary measures to avoid /overcome it. Mapping of course outcome with program outcomes Course Outcomes 1 2 3 4 a b c d X X X X X X Program Outcome e f g h X X X X X X X i j k 25 PLANT DESIGN, ECONOMICS AND ENTREPRENEURSHIP Sub Code : BT802 CIE : 50 Marks Credits : 4:0:0 SEE : 50 Marks Prerequisite: Process Equipment Design Course Coordinators: Mrs. Bhavya S G & Dr. Chandraprabha M N Objectives of the course: The course will provide: 1. To theoretically design of a project from conception to implementation including preliminary feasibility study, 2. To prepare process flow diagram, process design, preconstruction cost estimate, equipment sizing (design), selection of materials of construction and analysis of the project. 3. Ability to analyze the fundamentals of engineering economics and profitability analysis. 4. To analyze the principles of entrepreneurship with real time case studies. Course Content: UNIT- I Process Design Development & General Design Considerations: Process design and development, flow diagrams, marketability of the product, availability of technology, raw materials, equipment design-specification and manufacturing/procurement, human resources, land and utilities, site characteristics, waste disposal, government regulations and other legal restrictions, community factors and other factors affecting investment and production costs.. Depreciation & interest and investment cost: Time value of Money, Types of Interests, Nominal and effective interest rates, Continuous interest, annuities, Perpetuities, Depreciation, Types of depreciation, Methods for estimating depreciation. Numericals. UNIT- II Cost Estimation: Capital Investments: Fixed capital investments including land, building, equipment and utilities, installation costs, working capital investment. Cost indius. Manufacturing costs: Direct production costs (including raw materials, human resources, maintenance and repair, operating supplies, power and other utilities, royalties, etc.,), fixed charges, Plant Overhead cost: Administration, safety and other auxiliary services, payroll overhead, warehouse and storage facilities. Numericals. UNIT- III Profitability, Alternative Investments and Replacements: Profitability, basis for evaluating project profitability, Methods for profitability evaluation, Alternative investments, Replacement analysis: Replacement models, Break-Even analysis: Meaning and importance of Break-even point, Break-even chart and analysis. Industrial process plant design case studies (scenarios): citric acid production plant, food processing plant, soap production plant etc. Numericals. UNIT- IV Entrepreneurship: Meaning and importance, concepts of entrepreneurship, characteristics of successful entrepreneurs, classification of entrepreneurs, myths of entrepreneurship, evolution of entrepreneurship, development of entrepreneurship, stages in entrepreneurial process, role of entrepreneurs in the economic development , entrepreneurship development in India, barriers for entrepreneurship, profiles of successful entrepreneurs. Identification of business opportunities, market, technical, financial and social feasibility studies. Preparation Report: meaning of the project, project identification, project selection, project report, need and significance of report, formulation and guidance by Planning Commission for project Report, network analysis, errors of project report, project appraisal. 26 UNIT- V Small scale Industries: Definition, characteristics, need, rationale objectives, scope for SSIs. Role of SSI in economic development, advantages of SSI, Steps to start SSI, Govt. policies and support for SSI (during 5 year plans), Impact of liberalization, globalization of SSI, Effect of WTO/GATT, IPR and small Business enterprises, supporting agencies of Govt. for SSI – nature of support, objectives, types of help, Brief definitions and description of ancillary and tiny industry. IPR and small business enterprises. Institutions supporting SSIs and SBEs – central and state level institutions Women entrepreneurs: definition, environment, challenges, for women entrepreneurs, strategies for development of women entrepreneurs self help groups, Institutions and women’s organization supporting women entrepreneurs, profiles of successful women entrepreneurs. Text Books: 1. Peters and Timmerhaus (1989) Plant Design and Economics for Chemical Engineers, 4th edn., McGraw Hill. 2. Rudd and Watson (1987) Strategy of Process Engineering, Wiley. 3. Poornima M C (2006) Entrepreneurship Development and Small Business Enterprises”, Pearson education. Reference Books: 1. Vasanth Desai (2007) Dynamics of Entrepreneurial Development & Management”, Himalaya Publishing House. 2. Khanka SS (2004) Entrepreneurship Development, S Chand & Co. 3. Thomas W. Zimmer, Norman M. Scarborough.(2007), Essentials of Entrepreneurship and small Business Management Indirect Assessmen t Methods CIE Max marks Evidence collected Contributing to Course Outcomes Internal assessment tests Thrice(Average of the best two will be computed) 30 Blue books 1,2,3&4 Class-room open book assignment Twice( Average of the two will be computed) 10 Assignment reports 2,3&4 Once 05 Case solutions 3&4 Surprise quiz Once 05 Quiz answers 3&4 Standard examination End of course (Answering 5 of 10 questions) 100 Answer scripts 1,2,3&4 End of course - Questionnaire ---- Case analysis SEE Direct Assessment Methods Assessment and Evaluation vis-à-vis Course Outcomes: What To When/ Where whom (Frequency in the course) End of course survey Students Students 27 Outcome: Student learning outcomes will be: Upon successful completion of this course, the students will be able to: 1: Acquire knowledge in the design of a chemical plant. 2: Conduct preliminary feasibility study of the plant design assigned. 3: Estimate the cost analysis involved in the design of a chemical plant. 4: Develop entrepreneurs with substantial knowledge in engineering concepts. Mapping of course outcome with program outcomes Program Outcome Course a b c d e f g h outcome 1 X X 2 X X X 3 X X X X 4 X X X i X X j k X X 28 PROJECT WORK Sub Code Credits : BT804 : 0:0:14 CIE Project 50 marks 50 Marks Prerequisite: Course Coordinators: Project co-coordinator(s) / project work supervisor(s) Course objectives: 1.Learn to define and design research project(s) in their area of interest 2.Provide a platform to students to interact with faculty, peer, scientists /industrialist to develop projects. 3.Improve technical and professional skills 4.Learn to apply biotechnology concepts to real time projects. Assessment and Evaluation vis-à-vis Course Outcomes: When/ Where (Frequency in the course) Max marks Evidence collected Contributing to Course Outcomes Once 30 Oral presentation 1,2,3&4 Punctuality Throughout the course 5 Attendance and conduct during project work 3 Project Work report Once 10 Project report 1,2,3&4 Middle of the course - Feedback forms To whom t Asse ssm ent Case analysis / Literature survey and presentation skills CIE Direct Assessment Methods What Students Students feedback Students Course Outcome: On completion of this course student will have improved ability:1: Able to analyze complex data and draw scientific inferences or conclusion 2: Able to apply ethical, biosafety or socio-environmental concepts in their research work and at professional career 3: To evaluate managerial and team work or independent work skills, which can pave way for entrepreneurship 4: Able to apply research methodology for strategic formulation of research design. Mapping of course outcome with program outcomes Course outcome 1 2 3 4 a X X X b X X X c d X X Program Outcome e f g X X X X h X X X i X X j k X X X X X X 29 Sub Code Credits DRUG DESIGN AND DEVELOPMENT : BTPE13 CIE : 3:0:0 SEE : 50 Marks : 50 Marks Prerequisite: Bioinformatics and Pharmaceutical Biotechnology Course Coordinators: Krishna Murthy T P & Dr. Ravi Kumar Course Objectives: 1. To give broad overview over classes of medicinal drugs and to understand the mechanism of their action on molecular targets. 2. To illustrate the steps involved in the modern drug discovery process. 3. To know the concepts of Insilco drug design and molecular docking. 4. To apply the principles drug design in development of potential drug molecules for various diseases. Course Content: UNIT-I Introduction to Drug Discovery and Development: History of drug discovery, design and development-Introduction to drugs, their action and discovery: some desirable properties of leads and analogues, sources of leads and drugs, drugs from natural sources, methods and routes of administration: the pharmaceutical phase-drug action: The pharmacokinetic phase (ADME) and The pharmacodynamic phase-Classification of drugs- Drug structure and solubility- Omics technologies and Bioinformatics in and drug discovery and development. UNIT: II Molecular Drug Targets: Enzymes as drug targets: Introduction to Enzymes, Structure, types, mode of action, regulation, kinetics, inhibitors- Receptors as Drug Targets: Receptors, similarities and differences from enzymes, receptor classification, types of ligands-Oligonucleotides as Drug Targets-Miscellaneous drug targets. UNIT: III The Modern Drug Discovery Process: Traditional Medicine - Steps involved in Modern drug discovery- Finding a lead: Choosing a disease, choosing a drug target, identifying a bioassay, finding a lead compound- Optimizing target interactionoptimizing access to the target-Getting the drug to market: Preclinical and clinical trials, patenting and regulatory affairs , chemical and process development. Small molecule pharmaceutical drugs, large molecule biopharmaceutical Drugs- Personalized Medicine. UNIT-IV Molecular Modeling and Insilico Drug Design: Computer aided lead design-Determining Target Structure: Literature, X-Ray Crystallography, NMR Spectroscopy, Molecular Modelling- Complementarity between a Target and Drug: Intermolecular Forces, molecular shape, drug pharmacophore- Lingand Based drug design-Structure Based drug design- Fragment Based Drug Design- Computer aided drug design- Molecular Docking procedures: softwares for molecular docking, steps in molecular docking. Quantitative structure–activity relationship (QSAR). UNIT-V Case Studies: Antibacterial agents -Antiviral drugs used against DNA RNA viruses - Anti Cancer agents- Anti Ulcer agents- Zinc enzymes as drug tagets: Carbonic anhydrase inhibitors and activators- Glycogen synthase kinase inhibitors-Cyclooxygenase pathway and NSAID inhibitors. 30 Text Books: 1. Erland Stevens. Medicinal Chemistry: The Modern Drug Discovery Process. Prentice Hall; 1st edition, 2012. 2. Graham L. Patrick. An Introduction to Medicinal Chemistry, 5th Edition, Oxford University Press, USA. 2013. 3. Gareth Thomas. Medicinal Chemistry: An Introduction, Wiley-Blackwell, 2nd Edition edition, 2007. Reference Books: 1. Rick Ng , Drugs: From Discovery to Approval, Wiley-Blackwell; 3rd Edition, 2015 2. H. John Smith. Smith and Williams' introduction to the principles of drug design and action. 4th edition, CRC Press, 2006. 3. Povl Krogsgaard-Larsen, Kristian Strømgaard, Ulf Madsen. Textbook of Drug Design and Discovery, 4th edition, CRC Press, 2010. CIE Direct Assessment Methods Assessment and Evaluation vis-à-vis Course Outcomes: What To When/ Where whom (Frequency in the course) Thrice(Average Internal of the best two assessment tests will be computed) Assignment Indirect Assessmen t Methods SEE Surprise Test/ Quiz/ Mini Project Evidence collected Contributing to Course Outcomes 30 Blue books 1,2,3&4 Students Assignment/ reports Blue books/Quiz answers Once 10 Once 10 End of course (Answering 5 of 10 questions) 100 Answer scripts 1,2,3&4 - Feedback forms 1,2,3&4 & Delivery of the course Students Standard examination Students feedback Max marks End of course 1,2,3&4 1,2,3&4 Course Outcome: 1. Have knowledge on various types of drugs and their action respective molecular target. 2. To evaluate the principles of modern drug discovery and design. 3. To describe the various aspects Molecular modeling and Insilco drug design. 4. Integrate the knowledge acquired in drug discovery in development of potential drugs for various diseases. Mapping of course outcome with program outcomes Course Outcomes 1 2 3 4 a b X X c X X d X X X X Program Outcome e f g X X X h i j k X X 31 Sub Code Credits NANO-BIOTECHNOLOGY : BTPE14 CIE : 3:0:0 SEE : 50 Marks : 50 Mark Prerequisite: Course Coordinator: Dr. Bindu S Course Objectives: The course will 1. Provide an overview of the fundamental concepts of nanotechnology 2. Develop an understanding of bionano materials 3. Familiarize students with applications in the area of Biotechnology especially in health and medical Biotechnology. 4. Provide an understanding of microfluidics & its relevance to nanotechnology Course Content UNIT-I Introduction: A Brief History of the Super Small; Definition of Nano biotechnology. Discussions on nanofabrication, Bottom-Up versus Top-Down, Nanolithography, Microelectronic fabrication, Structure-property relationships in materials, biomolecule-surface interactions, Fabrication in Hard Materials, Silicon and glass materials, Hydrogels/PDMS/other polymers and base materials for nanoand microfabricated devices, Valuing Nanobiotechnology. UNIT-II Nano Materials and their Characterization: Buckyballs, Nanotubes, Nanobiotechnology, materials characterization techniques, scanning tunneling and atomic force microscopy, DNA microarrays, quantum dots, and hybrid biological/inorganic devices. Scanning tunneling microscopy and Atomic force microscopy. Nanobiomaterials: Function and application of DNA based nanostructures. UNIT-III Nanodiagnostics: Diagnostics and Sensors, Rapid Ex-Vivo Diagnostics, Nanosensors as Diagnostics, Nanotherapeutics. Nanofabricated devices to separate and interrogate DNA, Interrogation of immune and neuronal cell activities through micro-and nanotechnology based tools and devices. UNIT-IV Drug Discovery and Drug Delivery: Drug Discovery Using Nanocrystals, Drug Discovery Using Resonance Light Scattering (RLS) technology, Benefits of Nano-Imaging Agents, Drug Delivery using Nanobiosensors, Drug Delivery Applications, Bioavailability, Sustained and targeted release, Nanorobots, Benefits of Nano-Drug Delivery, Drug Delivery, Health Risks, and Challenges, Targeting, Drug Delivery Revenues, use of micro-needles and Nanoparticles for highly controlled drug delivery. UNIT-V Microfluids: Laminar flow, Hagen – Pouiselle equation, basic fluid ideas, Special considerations of flow in small channels, mixing, microvalves & micropumps, Approaches toward combining living cells, microfluids and ‘the body’ on a chip, Chemotaxis, Case studies in Microfluidic devices. BioMEMS: Introduction and Overview, Biosignal Transduction Mechanisms: Electromagnetic Transducers Mechanical Transducers, Chemical Transducers, Optical Transducers –Sensig and Actuating mechanisms (for all types). Ultimate Limits of Fabrication and Measurement, Recent Developments in BioMEMS. Text Books: 1. Stephen Lee and Lynn M Savage (1998) Biological molecules in Nanotechnology 32 2. Rosenthal, Sandra J and Wright, David W (2005) Nanobiotechnology Protocols, Humana Press. Reference Books: 1. Richard Booker and Earl Boysen (2005) Nanotechnology, Wiely dreamtech edition 2. Chapman & Hall (2002) Nanobiotechnology – Basic Science & Emerging Technologies ,CRC 3. Gregory Timp (1998) Nanotechnology, (Ed) Spring. 4. Nanotechnology(2002)by Mark Ratner and Daniel Ratner 5. Ratner (2005) Pearson Education 6. Transducers and instrtumentation, D.V.S Murthy (2008), Prentice Hall of India 7. Principles of Applied Biomedical Instrumentation(1989), Ed. 3., Geddes (L.A) & Baker (L.E) 8. Biochip Technology, Jing Chung & Larry J. Kricka Harwood academic publishers, 2001 Ass ess me CIE Max marks Evidence collected Contributing to Course Outcomes Internal assessment tests Thrice(Average of the best two will be computed) 30 Blue books 1,2,3&4 Assignment Once 10 Assignment reports 1&2 Mini Project SEE Direct Assessment Methods Assessment and Evaluation vis-à-vis Course Outcomes: When/ Where To (Frequency in What whom the course) Standard examination End of course survey Mini Project reports Students Students Once 10 3&4 End of course (Answering 5 of 10 questions) 100 Answer scripts 1,2,3&4 End of course - Questionnaire 1,2,3&4 Course Outcomes: on completion of this course student will have the ability to:1: Apply the fundamental concepts of nanotechnology in biotechnology. 2: Identify appropriate methods to synthesize and characterize nano materials. 3: Apply nanotechnology in diagnostics and therapeutics. 4: Improve drug discovery and delivery methods by applying microfluidics, nanorobotics and nano biosensors. Mapping of course outcome with program outcomes Program Outcome Course Outcomes a b c d e f g h 1 X 2 X X X X 3 X X X X 4 X X X i j k 33 OPERATION RESEARCH & MANAGEMENT Sub Code : BTPE15 CIE : 50 Marks Credits : 3:0:0 SEE : 50 Marks Prerequisite: Engineering mathematics Course Coordinators: Mr. Samrat K. Objectives of the course: 1. Understand the major capabilities and limitations of deterministic operations research modelling as applied to problems in industry or government. 2. Be able to recognize, formulate and, using prepared computer packages, solve allocation models of static or dynamic type. 3. Understand the reasons why the applicable algorithms work, and the effects on the computed solutions of variations in the data or in the assumptions underlying the models. 4. Be able to communicate the results of the modelling process to users who are not operations research specialists. Course Content: UNIT-I Introduction: Operations research model, solving the operation research model, Queuing and simulation models, Art of modelling, Phases of operation research study. Linear Programming: Two variable L-P model, Graphical linear programming solution, Analysis of selected linear programming models. UNIT-II The Simplex Method: Linear Programming solution space, Graphical to algebraic solution. The simplex method. Artificial starting solution, Special cases in simplex method applications. UNIT-III Transportation Model and Iotas Variants: Definition of transportation model. Non-traditional transportation models, Transportation algorithms, assignment model. UNIT-IV Network Models: Network definitions, Minimal spanning tree algorithm, CPM and PERT. UNIT-V Introduction to engineering management: Engineering and Management, Historical Development of Engineering Management. Functions of Technology Management: Planning and Forecasting, Decision Making, Organizing, Motivating and Leading Technical People, Controlling. Managing Projects: Project Planning and Acquisition, Project Organization, Leadership and Control. Text Books: 1. Hamdy H Taha (2002): Operation Research – An Introduction, 7e, Person Education/PHI2. Babcock & Morse (2004): Managing Engineering and Technology, Person Education, Reference Books: 1. Hellriegel, Jackson, Slocum (2003) Management – A competency based approach, Thomson South Western, 2. Koontz Weir rich (1988) Management, McGraw Hill, 3. Wayne L Winston (2003) Operations Research – Applications and Algorithms, Thomson Learning 34 Ass ess me CIE Max marks Evidence collected Internal assessment tests Thrice(Average of the best two will be computed) Blue books Class-room open book assignment Twice( Average of the two will be computed) Assignment reports Once Case solutions Surprise quiz Once Quiz answers Standard examination End of course (Answering 5 of 10 questions) 100 Answer scripts End of course - Questionnaire Case analysis SEE Direct Assessment Methods Assessment and Evaluation vis-à-vis Course Outcomes: When/ Where To What (Frequency in the whom course) End of course survey Students Students Contributing to Course Outcomes Course Outcome: 1: To demonstrate the skill of applying basic techniques to solve the proposed model 2: To apply mathematical software to solve the linear programming and integer programming models. 3: To build and solve Transportation Models and Assignment Models 4: To design new simple models, like: CPM, PERT to improve decision making processes Mapping of course outcomes with program outcomes Course outcome 1 2 3 4 a X X X b X X X c d Program Outcome e f g X h i X j k X X X X X X 35