Cultivating biodiversity for disease control, a case study in China

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Cultivating biodiversity for disease
control, a case study in China
Wang Yunyue, Zhu Youyong et al
The Phytopathology Laboratory of Yunnan
Province, Yunnan Agricultural University
I came from Yunnan where is a very beautiful place
~ Located
YUNNAN
in Southwest
China
~ From 20 to 29 degrees
north latitude and from
97 to 196 degrees east
longitude
~ About 383 thousand
square kilometers.
~ The elevation to rice
planting is highest at
2700 m at Lin Lang
County, and lowest at 76
m at Hekou County.
CHINA
Rice is major food crop in Yunnan
Total Rice Area in Yunnan: 800,000 ha
450, 000
7, 000
20, 000
13, 000
330, 000
I ndi ca
Japani ca
Gl ut i nous
Upl and
Blast is the main disease of rice in Yunnan
Indica Rice:
3-6% Losses of Yield
Japonica Rice: 5-14% Losses of Yield
Glutinous Rice: 25-36% Losses of Yield
Upland Rice: 26-50% Losses of Yield
use fungicide to control blast,
3-8 spray applications per growing season
ChongmenKuo, Shiping
12 August 2000
Hypothesis of genetic diversity for rice blast
management
Different rice varieties are planted in a field
or an area depending on the rice resources and
sustainable agriculture development, for raising
the ecology stability in field and strengthen
deference of plant, to control rice blast.
Zhu youyong at el 1997
Method:One row of
glutinous rice was added
in hybrid rice between 4-6
rows
Mixture technique was
accepted easily by more
and more farmers
60
In 1997, The field experiments of variety
diversity were done in 12 ha area of Shiping
county of Yunnan.
I nci dence
SI
50
40
30
20
10
0
Field experiment
AC
BC
C
AD
BD
D
Large Scale Field Trials In 1998
812 ha for
mixture
planting in 5
towns of
Shiping
15 ha for mixture
planting experiment
in Jiangshui
Large Scale Field Trials In 1999
3342 ha in Shiping and Jianshui counties
Yunnan
Large Scale Field Trials In 2000
43,000 ha for mixture planting in 41 counties of Yunnan in 2000
Yunnan
Large Scale Field Trials In 2001
107,400 ha for mixture planting in 62 counties of China 2001
.
China
458 field experiments have been done in 48 counties of 11 provinces of
China from 1997 to 2001
The results of variety diversity for rice
blast management from field
experiments
Rice blast of disease-susceptible rice varieties planted in
mixtures with resistant varieties was 83-94% less severe than
when they were grown in monoculture. Our results support the
view that the variety diversification provides an ecological
approach to disease control and contribute to the sustainability of
crop production
60
I nci dence
SI
50
40
30
20
10
0
AC
BC
C
AD
BD
D
The results of variety diversity for rice
blast management from field
experiments
Rice blast of hybrid rice varieties planted in mixtures
with traditional varieties was 26-50.2% less severe than
when they were grown in monoculture.
10
I nci d 8
ence 6
SI
4
2
0
AC
AD
A
BC
BD
B
The results of variety diversity for the
resistance of high quality variety to
lodging
High quality varieties planted in mixtures with hybrid
varieties had a strong resistance to lodging, and was 100%
not to lodging than when they were grown in monoculture.
Monoculture
Mixture
Monoculture
Mixture
The results of variety diversity for rice
yield increase from field experiments
Rice yield increased 636.3 to 1119.3 kg/ha. , especially
disease-susceptible rice varieties planted in mixtures
with resistant varieties had 89% greater yield than
when they were grown in monoculture. .
10500
9500
Yi el d
( ha/ kg)
Gl ut i nous
Hybri d
8500
7500
6500
5500
4500
3500
2500
1500
500
AC
AD
A
BC
BD
B
The results of variety diversity for cost
saving from reduction in pest pressure
Cost savings from reduction in pest pressure,
Yunnan Province, China, 2000.
Item
Number of sprays
Cost of pesticides ($ ha–1)
Labor for pesticide application (d ha–1)
Imputed cost of labor ($ ha–1)
Total cost ($ ha–1)
Financial benefit ($ ha–1)
Adopters Nonadopters
1
10.5
2.85
6.49
16.99
72.03
3
42.92
20.25
46.10
89.02
Mechanization research
1.Rice variety
Analysis on Resistance Gene Analogue (RGA) of
rice variety
Analysis on RFLP of Candidate resistance gene of
rice variety
2.Blast pathogen
Population structure and Genetic Diversity of
Magnaporthe grisea analysis by rep-PCR fingerprint
3.Relationship between rice variety and blast pathogen
4.Microclimate in field
直截40
Polymorphsium of fingerprint patterns for rice varieties
from Yunnan by RGA-PCR
215 varieties from all rice growing area in Yunnan
were assessed for LRR space polymorphism using
AFLP with 3 pairs primers: Pto-kin1/Pto-kin2, S1/
AS3, XLRR for/ XLRR rev
-0.1
Ô½ÄϹÈ
ÉÇÓÅ64
ÉÇÓÅ63
IIÓÅ63
KÓÅ130
DÓÅ63
ÍþÓÅ407
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µáı301
½ðÓŹð99
½ðÓÅ207
ÉÇÓÅ46
ºìÔç¹È
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IIÓÅ501
¹ð³¯2ºÅ
»Æ¿ÇÅ´
¾©¹ú92
ÀèÃ÷251
Ñ°ÔÓ36
µá³¬101
IIÓÅ7ºÅ
ÉÇÓÅ149
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KÓÅ802
½ðÓÅÍíÈý
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¸ÔÓÅ12
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IIÓÅ6078
II¶à1ºÅ
Ñ°ÔÓ29
ÔÆ»Ö290
Ó²¹È
µáÍÍ502
Ë¿ÓÅ63
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Àö½-ºÚ¹È
ºÏϵ40ºÅ
ºÏϵ22ºÅ
ºÏϵ23ºÅ
ºÏϵ26ºÅ
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_78251
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ºÏϵ21ºÅ
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³þ¾¬19ºÅ
³þ¾¬16ºÅ
³þ¾¬14ºÅ
Àä¹È3158
¸ßÁº¹È
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ºÏ¾¸6ºÅ
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½úºì1ºÅ
ºÏϵ8ºÅ
ºÏϵ15ºÅ
ºÏϵ4ºÅ
ºÏϵ3ºÅ
Ôƾ¬36ºÅ
ºÏϵ14ºÅ
ºÏϵ9ºÅ
ºÏϵ16ºÅ
ºÏϵ1ºÅ
ºÏϵ2ºÅ
³þ¾¬12ºÅ
Õ´¾¬7ºÅ
ºÏ¾¸8ºÅ
³þ¾¬18ºÅ
¾¸¾¬7ºÅ
ºÏϵ17ºÅ
ºÏϵ5ºÅ
Ôƾ¬9ºÅ
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ºÏϵ29ºÅ
ºÏϵ31ºÅ
ºÏϵ30ºÅ
ºÏϵ24ºÅ
ºÏϵ32ºÅ
ºÏϵ35ºÅ
ºÏϵ39ºÅ
ºÏϵ27ºÅ
ºÏϵ28ºÅ
µáϵ4ºÅ
Ôƾ¬20ºÅ
µáϵ3ºÅ
ºÏϵ25ºÅ
ºÏϵ13ºÅ
ºÏϵ36ºÅ
µáϵ2ºÅ
µáϵ1ºÅ
_97KG11
ºÏϵ6ºÅ
×ÓÔ¤_44
³þ¾¬22ºÅ
Ôƾ¬34ºÅ
ºÏϵ38ºÅ
ºÏϵ37ºÅ
ºÏϵ33ºÅ
Ôƹâ6ºÅ
ÛÂÍú¹È
Linkage Distance
Computer clusters results of 215 varieties for amplification with 3
pairs: XLRR for/ XLRR rev、S1/ AS3、Pto-kin1 /Pto-kin2
Unweighted pair-group average
Tree Diagram for 133 Variables
6.9
Euclidean distances
5.9
4.9
3.9
2.9
1.9
0.9
Zhu Youyong & Hei Lueng (2000)
X ia n y o u 6 3
X ia n y o u 2 2
Z in u o
H uangkenuo
H e x i4 1
C h u j in g 1 2
8126
0 .4 5
0 .5 6
0 .6 7
C o e f f ic ie n t
0 .7 9
0 .9 0
Rice varieties assessed by RFLP with 19
candidate R.gene probes
Tree Diagram for 24 Variables
Unweighted pair-group average
Euclidean distances
2.9
2.4
1.4
0.9
ÉÇÓÅ63
Ë¿ÓÅ63
ÉÇÓÅ22
Îĵ¾2ºÅ
µá¤201
ÔÆ»Ö290
»Æ°åËù
¸ÔÓÅ22
×ÏÅ´
¸ÔÓÅ63
µáÈð408
ºÁľϸ
µáÍÍ502
°Ë±¦¹È
ÆëÍ·¹È
³þ¾¬12ºÅ
ºÏϵ39ºÅ
Ôƹâ8ºÅ
³þ¾¬17ºÅ
ºÏϵ41ºÅ
´ó°×Å´
Ôƹâ9ºÅ
-0.1
ÀÕ°×Ïã¹È
0.4
»Æ¿ÇÅ´
Linkage Distance
1.9
Wang Yunyue, He Yueqiu & Sun Yin (2000)
Population structure of Magnaporthe grisea
analysis by rep-PCR fingerprint
2314 isolates of Magnaporthe grisea from
Yunnan and other 9 provinces were assessed by
rep-PCR with the primer Pot2.
Relationship between Rep-PCR groups of
isolates and rice varieties
Tai bei 8
Zhanj i ng
Hexi 41
Hexi
Chuj i ng
Bendi nuo
45
40
35
30
25
20
15
10
5
0
1
2
3
4
5
6
7
8
9 10 11 12 13 14
Hexi
Huangkenuo
Bendi gu
Xi anyou22
Xi anyou63
Relationship between Rep-PCR groups and
the region of isolates
45
40
35
30
25
20
15
10
5
0
1 2 3 4 5 6 7 8 9 10 11 12 13 14
Zhanyu
Xuanwei
Xi j i ang
Yuxi
Zaot ong
Longl i n
Kunmi ng
Pi ngbi an
Ji angshui
Luxi
Shi pi ng
Blast isolates were diversified by rice
variety diversity
1 and 30 lanes: markers (λDNA with hindIII and EcoRI); 2 to 11 lanes:
Isolates from monoplanting of Indica rice (Shanyou63); 12 to 21 lanes:
Isolates from monoplanting gultinous rice(Huangkenuo); 22 to 29 lanes:
Isolates from Mixture inter-planting (Shanyou63 and Huangkenuo)
B33
B42
B32
C3
B56
B55
B54
B40
B34
B31
B26
B24
B23
B22
B21
B19
B18
B16
B11
B10
B9
B8
C57
C48
C2
B43
B48
B15
B53
B52
B51
B47
B46
B44
B27
B17
B2
C60
C59
C58
C26
C25
C23
C20
C18
C16
C15
C12
C10
C9
C8
C7
C1
A18
A11
C35
C34
C33
C32
C31
C30
C28
C27
C24
C22
C21
C17
C13
C11
A55
A54
A53
A52
A51
A50
A48
A47
A45
A43
A42
A40
A38
A37
A36
A35
A34
A33
A32
A30
A29
A28
A27
A25
A24
A23
A22
A20
A19
A17
A16
A15
A14
A12
A10
A9
A8
A7
A6
A5
A4
A3
A2
A1
Linkage Distance
The cluster results 113 isolates from monoculture
and mixture inter-planting fields
Tree Diagram for 113 Variables
Unweighted pair-group average
Euclidean distances
3.2
2.7
2.2
1.7
1.2
0.7
0.2
-0.3
The cluster results 113 isolates from monoculture
and mixture inter-planting fields
Fi g3D
50
40
30
20
10
0
Hybrid rice
Glutinuos
Mixture
Spore proliferation of blast pathogen in monoculture
susceptible variety (Huangkenuo) field
06
.J
u
12 l
.J
u
18 l
.J
u
24 l
.J
u
31 l
.J
ul
7.
Au
14 g
.A
u
21 g
.A
u
28 g
.A
ug
3.
Se
p
3000
2500
2000
1500
1000
500
0
ÖÐ
Ð
Ä
2M
4M
8M
16M
ÐÐ
Ö
Ä
Spore proliferation of blast pathogen in
monoculture resistance variety (Shanyou63) field
ÖÐ
Ð
Ä
2M
4M
8M
16M
1000
800
600
400
8M
200
ÐÐ
Ö
Ä
7.
Au
g
14
.A
ug
21
.A
ug
28
.A
ug
3.
Se
p
ul
31
.J
ul
24
.J
ul
18
.J
ul
12
.J
06
.J
ul
0
Spore proliferation of blast pathogen in
mixture inter-planting field
(Shanyou63/huangkenuo)
2000
1500
1000
500
06
.J
u
12 l
.J
u
18 l
.J
u
24 l
.J
u
31 l
.J
ul
7.
Au
14 g
.A
u
21 g
.A
u
28 g
.A
ug
3.
Se
p
0
ÖÐ
Ð
Ä
2M
4M
8M
16M
16M
4M
ÐÐ
Ö
Ä
Microclimate in monoculture and
mixture-culture fields
(The temperature change curves at 8:00)
31
31
29
27
29
25
25
23
21
23
19
17
19
15
15
27
21
17
1 4 7 10 13 16 19 22 25 28 31 34 37 40 43 46 49 52 55 58
— A/D
—D
1 4 7 10 13 16 19 22 25 28 31 34 37 40 43 46 49 52 55 58
— B/C
—C
(The temperature change curves at 14:00)
39
39
36
36
33
33
30
30
27
27
24
24
21
21
18
18
15
15
1 4 7 10 13 16 19 22 25 28 31 34 37 40 43 46 49 52 55 58
— A/D
—D
1 4 7 10 13 16 19 22 25 28 31 34 37 40 43 46 49 52 55 58
— B/C
—C
(The relation humidity change curves at 8:00)
100
100
90
90
80
80
70
70
60
60
50
50
40
40
1 4 7 10 13 16 19 22 25 28 31 34 37 40 43 46 49 52 55 58
—D
— A/D
1
4
7 10 13 16 19 22 25 28 31 34 37 40 43 46 49 52 55 58
—C
— B/C
The relative humidity change curves at 14:00
100
100
90
90
80
80
70
70
60
60
50
50
40
40
1 4 7 10 13 16 19 22 25 28 31 34 37 40 43 46 49 52 55 58
—D
— A/D
1 4 7 10 13 16 19 22 25 28 31 34 37 40 43 46 49 52 55 58
—C
—B/ C
(The illumination change curves at 8:00)
45000
45000
40000
40000
35000
35000
30000
30000
25000
25000
20000
20000
15000
15000
10000
10000
5000
5000
0
0
1 4
7 10 13 16 19 22 25 28 31 34 37 40 43 46 49 52 55 58
— A/D
—D
1 4 7 10 13 16 19 22 25 28 31 34 37 40 43 46 49 52 55 58
— B/C
—C
The illumination change curves at 14:00
120000
120000
100000
100000
80000
80000
60000
60000
40000
40000
20000
20000
0
0
1 4 7 10 13 16 19 22 25 28 31 34 37 40 43 46 49 52 55 58
1 4 7 10 13 16 19 22 25 28 31 34 37 40 43 46 49 52 55 58
— A/D
—D
— B/C
—C
Nature
Vol.406, No.6797, pp:718 - 722
Genetic diversity and
disease control in rice
YOUYONG ZHU, HAIRU CHEN, JINGHUA FAN, YUNYUE
WANG, YAN LI, JIANBING CHEN, JINXIANG FAN, SHISHENG
YANG, LINGPING HU, HEI LEUNG, TOM W. MEW, PAUL S.
TENG, ZONGHUA WANG & CHRISTOPHER C. MUNDT
Crop heterogeneity is a possible solution to the
vulnerability of monocultured crops to disease. Both
theory and observation indicate that genetic heterogeneity
provides greater disease suppression when used over large
areas, though experimental data are lacking. Here we
report a unique cooperation among farmers, researchers
and extension personnel in Yunnan Province, China—
genetically diversified rice crops were planted in all the
rice fields in five townships in 1998 and ten townships in
1999. Control plots of monocultured crops allowed us to
calculate the effect of diversity on the severity of rice blast,
the major disease of rice. Disease-susceptible rice varieties
planted in mixtures with resistant varieties had 89%
greater yield and blast was 94% less severe than when they
were grown in monoculture. The experiment was so
successful that fungicidal sprays were no longer applied by
the end of the two-year programme. Our results support
the view that intraspecific crop diversification provides an
ecological approach to disease control that can be highly
effective over a large area and contribute to the
sustainability of crop production
Highly appraise in Nature, Science
and other newspaper
2000.8.17.英国《自然》 表
2000.8.18.美国《科学》 表
1999.7.13-15 Kunming
International workshop on
diversity for sustainable crop
diseases
70,000 farmers
were Trained
2000.8.21-23 Kunming
International workshop
on diversity for
sustainable crop diseases
We have since extended the idea of
diversification to control diseases and insect
pests of other major crops in Yunnan,
particularly wheat and broadbean. This
intercropping design reduced the incidence of
rust by 19-27 %, and damage due to bean stem
maggot decreased to minimal. The intercrop
registered a 24-26% yield advantage over the
monocrop at all sites. Rhizobial nodule
formation in intercropped broadbean was also
significantly higher than in the monoculture
crop.
This intercropping design of corn and peanut
reduced the incidence of corn northern leaf
blight and corn southern leaf blight by 35-56
%, and a 8-12% yield advantage over the
monocrop at 5 sites of 1320 ha in Yunnan. An
extensive network of researchers and extension
personnel is being formed in Yunnan to
disseminate this technology to farmers.
Acknowledgements
Supported by the Asian Development Bank, the
Yunnan Province Government, the Ministry of
Science and technology committee of China and the
International Rice Research Institute (IRRI). We
thank personnel of the provincial and county Plant
Protection Stations and participating farmers for
their contributions and dedication to this project
Thanks
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