Integrated Science Chapter 6: Chemistry in Biology Atoms The building blocks of matter Atoms Protons Positive (+) Inside the nucleus Mass of 1 Neutrons No Charge Inside the nucleus Mass of 1 Electrons Negative (-) Outside the nucleus No mass Elements A pure substance that cannot be broken down. Most commonly found in living things are CHONPS. Compounds: a pure substance formed when two or more different elements combine. Examples: H2 O NaCl (salt) CH4 (Methane gas) Organic compounds • • A compound containing Carbon • Exceptions: CO2 CO CaCO3 All living organisms are made up of organic compounds Organic Compounds • • Carbon = 4 covalent bonds Carbon can bond to itself • Results in a variety of important organic compounds Organic Molecules • Carbon based molecules form straight chains, branched chains and rings. Macromolecules: four classes of organic compounds 1. Carbohydrates 2. Lipids 3. Proteins 4. Nucleic Acids Macromolecules Polymer = many units Monomer = one unit Carbohydrates carbon, hydrogen and oxygen Includes sugars, starches and cellulose • Uses • Energy storage • Build cell walls • Usually end in “-ose” Monosaccharide • • Single (simple) sugar Monomers of carbohydrates • Ex: Glucose (energy in cells)(from the sun), • Fructose(fruit sugar), • Galactose Disaccharides Double sugar • C12H22O11 (sucrose) • Example: • Sucrose • Lactose (milk sugar) • Polysaccharides • • • Many sugars Starch- plants Glycogen- animal starch cellulose • • • Long chains of starch Very strong Function: plant cell walls Lipids What are they? Fats, oils, waxes, steroids Function Energy storage Insulation Cell membrane Coatings Hormones Lipid Structure Triglyceride = Glycerol 3 Fatty Acid Chains Saturated vs. Unsaturated Fats Lipids Saturated Solid Straight Unsaturated Liquid Bent What are trans fats? (isomer) Chemically altered unsaturated fats Not found in nature Your body doesn’t know how to break them down Phospholipid function Phospholipid bilayer in the cell membrane Steriods Proteins Contain C, H, N, O (S) Enzymes (Amylase) Antibodies Hormones-regulate body functions (insulin) Types of Proteins 1. Structural: 1. 2. 2. Contractile 1. 3. Keratin (hair, nails) Collagen Actin/myosin (muscles) Pigments (skin, hair, iris) Protein Structure 1. Amino Acids 20 different kinds What are enzymes and why are they important? Specialized proteins. Speeds up a reaction (not consumed) How do enzymes work? Enzymes bind with a substrate and break it into two or more products. What are some examples of enzymes? Lipase – breaks down fat Helicase- unwinds DNA Amylase – breaks down food in your mouth DNA Polymerase- assemble nucleotides in DNA replication Pepsin – breaks down proteins What do all Enzymes have in common? 1. Active Site Location that the substrate binds to. What do all enzymes have in common? 2.Very specific Lipase only breaks down fat Helicase unwinds DNA for replication What do all enzymes have in common? 3. Recycled Can be used over and over Only a small amount is needed to speed up thousands of reactions. What is activation energy? Amount reaction of energy needed to start a How do enzymes affect activation energy? Enzymes lower activation energy How is enzyme activity affected by pH? Too high/low = denatures How is enzyme activity affected by temperature? Too high = denatures Too low = inactive How is enzyme activity affected by enzyme concentration? More Enzymes = faster rate of reaction How is enzyme activity affected by substrate concentration? The rate of reaction will gradually increase until it levels off. The Enzyme Song https://www.youtube.com/watch?v=deF QhPurj-k Nucleic Acids DNA Contains hereditary info (genes) Double helix RNA Protein synthesis Single helix Flow of information DNA → RNA → Proteins