Paula Ingram Darasaw pmid2@aol.com 1 Be Principles of cell theory General cellular anatomy able to discuss the: Lipid bilayer membrane and function Overview of organelles Cellular physiology Overview of cell transport and diffusion Vesicular transport 2 The cell is the smallest structural and functional unit capable of carrying out life processes. The functional activities of each cell depend on the specific structural properties of the cell. Cells are the living building blocks of all plant and animal organisms. All organism’s structure and function ultimately depend on the individual and collective structural characteristics and functional capabilities of its cells. All new cells and new life arise only from pre-existing cells. Because of this continuity of life, the cells of all organisms are fundamentally similar in structure and function. 3 All cells have some common structures and functions Human cells have three basic parts: Plasma membrane—flexible outer boundary Cytoplasm—intracellular fluid containing organelles Nucleus—control center 4 Chromatin Nucleolus Nuclear envelope Nucleus Smooth endoplasmic reticulum Mitochondrion Cytosol Lysosome Centrioles Centrosome matrix Cytoskeletal elements • Microtubule • Intermediate filaments Plasma membrane Rough endoplasmic reticulum Ribosomes Golgi apparatus Secretion being released from cell by exocytosis Peroxisome 5 Bimolecular layer of lipids and proteins in a constantly changing fluid mosaic Plays a dynamic role in cellular activity Separates intracellular fluid (ICF) from extracellular fluid (ECF) Interstitial fluid (IF) = ECF that surrounds cells 6 7 Integral proteins Firmly inserted into the membrane (most are transmembrane) Functions: Transport proteins (channels and carriers), enzymes, or receptors Peripheral proteins Loosely attached to integral proteins Include filaments on intracellular surface and glycoproteins on extracellular surface Functions: Enzymes, motor proteins, cell-to-cell links, provide support on intracellular surface, and form part of glycocalyx 8 1. 2. 3. Transport Receptors for signal transduction Attachment to cytoskeleton and extracellular matrix 4. 5. 6. Enzymatic activity Intercellular joining Cell-cell recognition 9 Three types: Tight junction - Prevent fluids and most molecules from moving between cells Desmosome - “Rivets” or “spot-welds” that anchor cells together Gap junction - Transmembrane proteins form pores that allow small molecules to pass from cell to cell 10 Passive processes No cellular energy (ATP) required Substance moves down its concentration gradient Active processes Energy (ATP) required Occurs only in living cell membranes 11 12 Simple diffusion Carrier-mediated facilitated diffusion Channel-mediated facilitated diffusion Osmosis 13 14 15 16 Movement of solvent (water) across a selectively permeable membrane Water diffuses through plasma membranes: Through the lipid bilayer Through water channels called aquaporins (AQPs) Water concentration is determined by solute concentration because solute particles displace water molecules Osmolarity: The measure of total concentration of solute particles When solutions of different osmolarity are separated by a membrane, osmosis occurs until equilibrium is reached 17 18 (a) Membrane permeable to both solutes and water Solute and water molecules move down their concentration gradients in opposite directions. Fluid volume remains the same in both compartments. Left compartment: Solution with lower osmolarity Right compartment: Solution with greater osmolarity Both solutions have the same osmolarity: volume unchanged H2O Solute Membrane Solute molecules (sugar) 19 Figure 3.8a (b) Membrane permeable to water, impermeable to solutes Solute molecules are prevented from moving but water moves by osmosis. Volume increases in the compartment with the higher osmolarity. Left compartment Right compartment Both solutions have identical osmolarity, but volume of the solution on the right is greater because only water is free to move H2O Membrane Solute molecules (sugar) 20 Figure 3.8b 21 Two types of active processes: Active transport Vesicular transport Both use ATP to move solutes across a living plasma membrane 22 Requires carrier proteins (solute pumps) Moves solutes against a concentration gradient Types of active transport: Primary active transport Secondary active transport 23 24 Extracellular fluid Na+ Na+-K+ pump K+ ATP-binding site Cytoplasm 11Cytoplasmic Na+ binds to pump protein. Cytoplasmic Na+ binds to pump protein. 25 Na+ bound P ATP ADP 2 Binding of Na+ promotes phosphorylation of the protein by ATP. 26 Figure 3.10 step 2 Na+ released P 3 Phosphorylation causes the protein to change shape, expelling Na+ to the outside. 27 K+ P 4 Extracellular K+ binds to pump protein. 28 K+ bound Pi 5 K+ binding triggers release of the phosphate. Pump protein returns to its original conformation. 29 K+ released 6 K+ is released from the pump protein and Na+ sites are ready to bind Na+ again. The cycle repeats. 30 31 Functions: Exocytosis—transport out of cell Endocytosis—transport into cell Transcytosis—transport into, across, and then out of cell Substance (vesicular) trafficking—transport from one area or organelle in cell to another 32 1 Coated pit ingests Extracellular fluid substance. Protein coat (typically clathrin) Plasma membrane Cytoplasm 2 Protein- coated vesicle detaches. 3 Coat proteins detach and are recycled to plasma membrane. Transport vesicle Endosome Uncoated endocytic vesicle 4 Uncoated vesicle fuses with a sorting vesicle called an endosome. 5 Transport vesicle containing membrane components moves to the plasma membrane for recycling. Lysosome 6 Fused vesicle may (a) fuse (a) with lysosome for digestion of its contents, or (b) deliver its contents to the plasma membrane on the opposite side of the cell (transcytosis). (b) 33 Plasma membrane Extracellular SNARE (t-SNARE) fluid Secretory vesicle Vesicle SNARE (v-SNARE) Molecule to be secreted The process of exocytosis Fusion pore formed 1 The membrane- 3 The vesicle bound vesicle migrates to the plasma membrane. and plasma membrane fuse and a pore opens up. Cytoplasm 2 There, proteins 4 Vesicle at the vesicle surface (v-SNAREs) Fused v- and bind with t-SNAREs t-SNAREs (plasma membrane proteins). contents are released to the cell exterior. 34 35 Located between plasma membrane and nucleus Cytosol Water with solutes (protein, salts, sugars, etc.) Cytoplasmic organelles Metabolic machinery of cell Inclusions Granules of glycogen or pigments, lipid droplets, vacuoles, and crystals 36 Membranous Mitochondria Peroxisomes Lysosomes Endoplasmic reticulum Golgi apparatus Nonmembranous Cytoskeleton Centrioles Ribosomes 37 Double-membrane structure with shelflike cristae Provide most of cell’s ATP via aerobic cellular respiration Contain their own DNA and RNA 38 Granules containing protein and rRNA Site of protein synthesis Free ribosomes synthesize soluble proteins Membrane-bound ribosomes (on rough ER) synthesize proteins to be incorporated into membranes or exported from the cell 39 Interconnected tubes and parallel membranes enclosing cisternae Continuous with nuclear membrane Two varieties: Rough ER Smooth ER 40 Smooth ER Nuclear envelope Rough ER Ribosomes (a) Diagrammatic view of smooth and rough ER 41 Figure 3.18a External surface studded with ribosomes Manufactures all secreted proteins Synthesizes membrane integral proteins and phospholipids 42 Tubules arranged in a looping network Enzyme (integral protein) functions: In the liver—lipid and cholesterol metabolism, breakdown of glycogen, and, along with kidneys, detoxification of drugs, pesticides, and carcinogens Synthesis of steroid-based hormones In intestinal cells—absorption, synthesis, and transport of fats In skeletal and cardiac muscle—storage and release of calcium 43 Stacked and flattened membranous sacs Modifies, concentrates, and packages proteins and lipids Transport vessels from ER fuse with convex cis face of Golgi apparatus Proteins then pass through Golgi apparatus to trans face Secretory vesicles leave trans face of Golgi stack and move to designated parts of cell 44 1 Protein- containing vesicles pinch off rough ER and migrate to fuse with membranes of Golgi apparatus. Rough ER Phagosome ER membrane Proteins in cisterna Pathway C: Lysosome containing acid hydrolase enzymes Vesicle becomes lysosome 2 Proteins are modified within the Golgi compartments. 3 Proteins are then packaged within different vesicle types, depending on their ultimate destination. Plasma membrane Golgi apparatus Pathway A: Vesicle contents destined for exocytosis Secretory vesicle Pathway B: Vesicle membrane to be incorporated into plasma membrane Secretion by exocytosis Extracellular fluid 45 Figure 3.20 Spherical membranous bags containing digestive enzymes (acid hydrolases) Digest ingested bacteria, viruses, and toxins Degrade nonfunctional organelles Break down and release glycogen Break down bone to release Ca2+ Destroy cells in injured or nonuseful tissue (autolysis) 46 Overall function Produce, store, and export biological molecules Degrade potentially harmful substances The Endomembrane System includes the Endoplasmic Reticulum, Golgi Apparatus, Secretory Vesicles and Lysosomes as well as the Nuclear Envelope 47 Membranous sacs containing powerful oxidases and catalases Detoxify harmful or toxic substances Neutralize dangerous free radicals (highly reactive chemicals with unpaired electrons) Oxidases convert free radicals to hydrogen peroxide, which is also reactive and dangerous but is quickly converted to water by catalase enzymes 48 Elaborate series of rods throughout cytosol that support cellular structures and provide the machinery to generate various cell movements. There are three types of rods in the cytoskeleton, in order of increasing size: Microfilaments Intermediate Filaments Microtubules 49 Dynamic actin strands attached to cytoplasmic side of plasma membrane Involved in cell motility, change in shape, endocytosis and exocytosis 50 (a) Microfilaments Strands made of spherical protein subunits called actins Actin subunit 7 nm Microfilaments form the blue network surrounding the pink nucleus in this photo. 51 Figure 3.23a Tough, insoluble ropelike protein fibers Resist pulling forces on the cell and attach to desmosomes Because the protein composition of intermediate filaments varies in different cell types, these cytoskeleton elements have a variety of names depending on the type of cell, e.g., they are called neurofilaments in nerve cells and keratin filaments in epithelial cells 52 (b) Intermediate filaments Tough, insoluble protein fibers constructed like woven ropes Fibrous subunits 10 nm Intermediate filaments form the purple batlike network in this photo. 53 Figure 3.23b Dynamic hollow tubes Most radiate from centrosome Determine overall shape of cell and distribution of organelles 54 (c) Microtubules Hollow tubes of spherical protein subunits called tubulins Tubulin subunits 25 nm Microtubules appear as gold networks surrounding the cells’ pink nuclei in this photo. 55 Figure 3.23c Protein complexes that function in motility (e.g., movement of organelles and contraction) Powered by ATP 56 Vesicle ATP Receptor for motor molecule Motor molecule (ATP powered) Microtubule of cytoskeleton (a) Motor molecules can attach to receptors on vesicles or organelles, and “walk” the organelles along the microtubules of the cytoskeleton. ATP Motor molecule (ATP powered) Cytoskeletal elements (microtubules or microfilaments) (b) In some types of cell motility, motor molecules attached to one element of the cytoskeleton can cause it to slide over another element, as in muscle contraction and cilia movement. 57 Figure 3.24 “Cell center” near nucleus Generates microtubules; organizes mitotic spindle Contains centrioles: Small tube formed by microtubules 58 Centrosome matrix Centrioles (a) Microtubules 59 Figure 3.25a Cilia and flagella Whiplike, motile extensions on surfaces of certain cells Contain microtubules and motor molecules Cilia move substances across cell surfaces Longer flagella propel whole cells (tail of sperm) 60 Outer microtubule doublet Dynein arms The doublets also have attached motor proteins, the dynein arms. Central microtubule Cross-linking proteins inside outer doublets The outer microtubule doublets and the two central microtubules are held together by cross-linking proteins and radial spokes. Radial spoke TEM A cross section through the Microtubules cilium shows the “9 + 2” arrangement of microtubules. Cross-linking proteins inside outer doublets Radial spoke Plasma membrane Plasma membrane Triplet Basal body TEM A longitudinal section of a cilium shows microtubules running the length of the structure. Cilium TEM Basal body (centriole) A cross section through the basal body. The nine outer doublets of a cilium extend into a basal body where each doublet joins another microtubule to form a ring of nine triplets. 61 Figure 3.26 Power, or propulsive, stroke 1 2 3 4 Recovery stroke, when cilium is returning to its initial position 5 6 7 (a) Phases of ciliary motion. Layer of mucus Cell surface (b) Traveling wave created by the activity of many cilia acting together propels mucus across cell surfaces. 62 Figure 3.27 Microvilli Fingerlike extensions of plasma membrane Increase surface area for absorption Core of actin filaments for stiffening 63 Genetic library with blueprints for nearly all cellular proteins Responds to signals and dictates kinds and amounts of proteins to be synthesized Most cells are uninucleate Red blood cells are anucleate Skeletal muscle cells, bone destruction cells, and some liver cells are multinucleate 64 Nuclear pores Nuclear envelope Nucleus Chromatin (condensed) Nucleolus Cisternae of rough ER (a) 65 Figure 3.29a Double-membrane barrier containing pores Outer layer is continuous with rough ER and bears ribosomes Inner lining (nuclear lamina) maintains shape of nucleus Pore complex regulates transport of large molecules into and out of nucleus 66 Surface of nuclear envelope. Fracture line of outer membrane Nuclear pores Nucleus Nuclear lamina. The netlike lamina composed of intermediate filaments formed by lamins lines the inner surface of the nuclear envelope. (b) Nuclear pore complexes. Each pore is ringed by protein particles. 67 Figure 3.29b Dark-staining spherical bodies within nucleus Involved in rRNA synthesis and ribosome subunit assembly 68 Threadlike strands of DNA (30%), histone proteins (60%), and RNA (10%) Arranged in fundamental units called nucleosomes Condense into barlike bodies called chromosomes when the cell starts to divide 69 1 DNA double helix (2-nm diameter) Histones 2 Chromatin (“beads on a string”) structure with nucleosomes Linker DNA Nucleosome (10-nm diameter; eight histone proteins wrapped by two winds of the DNA double helix) (a) 3 Tight helical fiber 4 Looped domain (30-nm diameter) 5 Chromatid structure (300-nm diameter) (700-nm diameter) (b) Metaphase chromosome (at midpoint of cell division) 70 Figure 3.30