Page 1 – Enzyme Concentration The Effect of Enzymes on Reaction Rate Group Leader: ____________________ Computer Technician: _____________________ Recorder: ________________________ Materials Technician: ______________________ Problem: H2O2 How do enzymes work best? Background Catalase Enzymes are special proteins that control most of the chemical reactions that occur in living organisms. They act as biological catalysts. A catalyst is a substance that speeds up or slows down a chemical reaction without being destroyed or changed during the reaction. One enzyme may catalyze, or start, thousands of reactions every second. Enzymes may be affected by many factors. The temperature, pH, and concentration (amount) of an enzyme can affect how well the enzyme speeds up a certain reaction. In this laboratory, you will investigate how enzymes can affect chemical reactions. The chemical reaction that you will investigate in this experiment is the breakdown of hydrogen peroxide (H2O2). Hydrogen peroxide is toxic to many cells. It is sometimes created whenever cells use sugars for energy. Many organisms can breakdown hydrogen peroxide (H2O2) using enzymes. The enzymes destroy the H2O2 before it can do much damage. The chemical equation below shows the chemical reaction. Catalase H2O O2 Catalase Figure 1: Hydrogen peroxide enters the active site of the enzyme catalase where it is broken down into water and oxygen. 2 H2O2 2 H2O + O2 This chemical reaction is a decomposition reaction because H2O2 breaks down, or decomposes, into oxygen and water. While this reaction will occur spontaneously, enzymes increase the rate, or speed, of the reaction. At least two different enzymes are known to catalyze this reaction: catalase, found in animals, and peroxidase, found in plants. It is possible to measure the rate of this chemical reaction by measuring how quickly its products are formed. In this laboratory you will use a Gas Pressure Sensor and the Vernier Logger Pro data-logging software program to measure the formation of gas, namely oxygen, from this reaction. The sensor measures the amount of pressure in a sealed vessel and plots it on a graph similar to the one at the left. After combining an enzyme with hydrogen peroxide you can measure the pressure change in a sealed reaction chamber to determine how quickly the reaction proceeds. At the start of the reaction, the pressure in the chamber will be the same as the pressure in the room. After a short Page 2 –Enzyme Concentration time, oxygen accumulates in the chamber at a rather constant rate and the pressure in the sealed chamber increases. The slope of the curve at this initial time is constant and is called the initial rate. This is the time during which oxygen is being produced rapidly. As the hydrogen peroxide is destroyed by the enzyme, less of it is available to react. As this happens, O2 is produced at lower rates. When no more hydrogen peroxide is left, O2 is no longer produced. Since no more gas is being produced, the pressure will change little and the graph appears flat at this time. In this laboratory you will first complete a skill builder in which you will learn how to use the Vernier Logger Pro software and gas pressure sensor. Next, you will be assigned a question to research with your laboratory group. Using the equipment provided, your group will design and conduct an experiment to test your question. Finally, your group will write a laboratory report that summarizes your experiment and your research findings. Pre-Lab Questions –Answer these questions to check your understanding. 1. What is an enzyme? _________________________________________________________________________________ _________________________________________________________________________________ 2. List three factors that can affect how well an enzyme works? _________________________________________________________________________________ _________________________________________________________________________________ 3. What chemical reaction will you be investigating in this laboratory? What is the reactant? What are the products? _________________________________________________________________________________ _________________________________________________________________________________ _________________________________________________________________________________ _________________________________________________________________________________ 4. Why is this reaction important to organisms? _________________________________________________________________________________ _________________________________________________________________________________ _________________________________________________________________________________ _________________________________________________________________________________ 5. What enzymes catalyze this reaction in organisms? _________________________________________________________________________________ _________________________________________________________________________________ 6. How will you measure the speed, or rate, of this chemical reaction in this laboratory? _________________________________________________________________________________ _________________________________________________________________________________ _________________________________________________________________________________ _________________________________________________________________________________ Page 3 –Enzyme Concentration Materials computer Vernier computer interface LoggerPro software Vernier Gas Pressure Sensor 1-hole rubber stopper assembly 10 mL graduated cylinder 1.5% H2O2 solution enzyme suspension dropper four 18 x 150 mm test tubes test tube rack distilled water bottle Optional Items warming plates ice bath thermometer test tube clamp pH buffers Skill Builder Procedure 1. Obtain and wear goggles. 2. Connect the Gas Pressure Sensor to the computer interface. 3. Connect the plastic tubing to the valve on the Gas Pressure Sensor. 4. Prepare the computer for data collection. Open the Logger Pro 3.8.4 program from the Vernier Software folder of the computer. When the program opens… Go to the “File’ menu. Open the file Biology with Computers. Open the file “06B Enzyme (Pressure)” 5. Place three test tubes in a rack and label them ‘Control’, 1, 2, and 3. Fill the Control test tube with 6 mL of distilled water. This will be your control. Fill test tubes 1, 2, and 3 with 6 mL of 1.5% H2O2 each. 6. Begin the enzyme catalyzed reaction. a. Using a clean dropper, add 1 drop of enzyme suspension to the control test tube. Be sure to not let the enzyme fall against the side of the test tube. b. Stopper the test tube and gently swirl to thoroughly mix the contents. c. Connect the free-end of the plastic tubing to the connector in the rubber stopper. Twist gently to lock the tubing in place. d. Click to begin data collection. Data collection will end after 3 minutes. NOTE: If the pressure exceeds 130 kPa, the pressure inside the tube will be too great and the rubber stopper is likely to pop off. Disconnect the plastic tubing from the Gas Pressure sensor if the pressure exceeds 130 kPa. Page 4 –Enzyme Concentration 7. When data collection has finished, disconnect the plastic tubing connector from the rubber stopper. Remove the rubber stopped from the test tube and discard the contents into the sink. Rinse the test tube with distilled water and place on the test tube rack to dry. 8. Move your data to a stored run. To do this, go to the Experiment menu. Choose Store Latest Run. 9. Repeat steps 6 through 8 for test tubes 1, 2, and 3 with the following changes to part 5a: Add 1 drop of the enzyme suspension to test tube 1. Add 2 drops of the enzyme suspension to test tube 2. Add 3 drops of the enzyme suspension to test tube 3. 10. Analyze the three lines that you have stored. In the first trial you did not add any hydrogen peroxide; therefore, no reaction occurred. The shape of the line can be used for comparison to trials 1, 2, and 3 to determine what effect the enzyme had on hydrogen peroxide. Each trial should have an almost straight portion that goes up quickly then levels at some point. (Note: The control may not show this.) Using the mouse, select and measure the slope of this initial straight-line portion of each graph. To do this: a. Click on the line at the bottom left where it just begins to rise. b. Hold down the mouse button and drag the dark shaded region to the upper right to the part of the line that appears to no longer increase. c. Click on the Linear Fit button, (marked with a line and an ‘R”). d. Click and a best-fit line will be shown for each run selected. A floating text box will show you the slope, m, for each line. e. In Data Table 1, record the value of the slope, m, for each of the four runs. Data Table 1: The Effect of an Enzyme on a Chemical Reaction Trial Test Tube Contents 1 1 Drop w water 2 1 Drop w H2O2 3 2 Drops w H2O2 4 3 Drops w H2O2 Slope, or rate (%/min) 11. To print a graph of “Gas Pressure vs. Time” showing all three data runs: a. Label all three curves by choosing Text Annotation from the Insert menu, and typing “Control” (or “Trial 1”, or “Trial 2”, etc.) in the edit box. Then drag each box to a position near its respective curve. Adjust the position of the arrow head. Page 5 –Enzyme Concentration b. Print a copy of the graph with all three data sets and the lines of best fit displayed. Enter your name(s) in the dialogue box before you print the graph. Attach this graph to your final laboratory report to be handed in. 12. Answer the Skill Builder Questions below. Skill Builder Questions –Answer these questions to check your understanding. 1. Compare the slopes of the Control and Trial 1. How do you know that the enzymes initiate a chemical reaction with hydrogen peroxide? _________________________________________________________________________________ _________________________________________________________________________________ _________________________________________________________________________________ _________________________________________________________________________________ 2. Compare the slopes of Trials 1, 2, and 3. What happens to the rate of the reaction if you add more enzyme? _________________________________________________________________________________ _________________________________________________________________________________ _________________________________________________________________________________ _________________________________________________________________________________ 3. Predict the rate of the chemical reaction if you added 4 drops of enzyme suspension to 6mL of 1.5% H2O2? (Give an educated guess for a slope value here.) _________________________________________________________________________________ ______________________________________________________________________________ References: “catalase. ” Wikipedia, the Free Encyclopedia. Accessed on November 7, 2004. http://en.wikipedia.org/wiki/Catalase ( I know!) Contolini, N. “An Inquiry Laboratory Activity for Biology” Access Excellence. National Health Museum. Accessed 3 Nov, 2009. <http://www.accessexcellence.org/AE/AEC/AEF/1994/contolini_inquiry.php> “liver.” Medline Plus. U.S. National Library of Medicine. 29 Oct. 2009. Accessed 3 Nov. 2009. <http://www.nlm.nih.gov/medlineplus/ency/imagepages/8850.htm> Masterman, D. & S. Holman. Biology with Computers, 3rd Ed. Vernier Software & Technology, Beaverton, OR, 2003.