Chapter 6 Vocab: Pathways that Harvest and Store Chemical Energy Absorption Spectrum- a graph of light absorption vs. wavelength of light; shows how much light is absorbed at each wavelength Action Spectrum- graph of a biological process vs. light wavelength; shows which wavelengths are involved in the process Aerobic- requires 02 Anaerobic- doesn’t require 02 Autotrophs- organism that is capable of living exclusively on inorganic materials, water, and some energy source (sunlight- photoautotrophs, chemically reduced matter- chemoautotrophs) Calvin cycle- stage of photosynthesis when CO2 rx with RuBP to form 3PG, then 3PG is reduced to a sugar, and RuBP is regenerated, while other products are released to the rest of the plant Carbon-fixation reaction- phase of photosynthesis in which chemical energy captured in light rx is used to drive the reduction of CO2 to form carbohydrates Cellular respiration-the catabolic pathways by which electrons are removed from various molecules and passed through intermediate electron carriers to O2, generating H2O and releasing energy Chemiosmosis- formation of ATP in mitochondria and chloroplasts, resulting from a pumping of protons across a membrane (against a gradient of electrical charge and of pH), followed by the return of the protons through a protein channel with ATP synthase activity Chlorophyll A- complex ring structure with magnesium ion in center and long hydrocarbon tail that anchors the chlorophyll to the integral proteins in the thylakoid membrane of the chloroplast Chlorophyll B- differs from A only with the replacement of a methyl group (--CH3) with an aldehyde group (--CHO) Citric acid cycle/Krebs cycle- in cellular respiration, a set of chemical rx whereby acetyl CoA is oxidized to CO2 and hydrogen atoms are stored as NADH and FADH2 Coenzyme A (CoA)- used in various biochemical rx as a carrier of acyl groups Cyclic electron transport- in photosynthetic light rx, the flow of e- that produces ATP but no NADPH or O2 (anaerobic cycle) Electromagnetic radiation- a self-propagating wave that travels through space and has both electrical and magnetic properties Electron transport- passage of e- through a series of proteins with a release of energy which may be captured in a concentration gradient or in chemical form such as NADH or ATP Fermentation-anaerobic degradation of a substance such as glucose to smaller molecules such as lactic acid or alcohol with the extraction of energy Gluconeogenesis- biochemical synthesis of glucose from other substances, such as aa, lactate, and glycerol Glyceraldehyde 3-Phosphate (G3P)- phosphorylated three carbon sugar; intermediate in glycolysis and photosynthetic carbon fixation Glycolysis- enzymatic breakdown of glucose to pyruvic acid Heterotrophs- an organism that requires preformed organic molecules as food (depends on autotrophs) Light reactions- initial phase of photosynthesis, in which light energy is converted to chemical energy Light-harvesting complexes- in photosynthesis, a group of different molecules that cooperate to absorb light energy and transfer it to a rx center Oxidation- relative loss of electrons in a chemical rx; either outright removal to form an ion, or the sharing of electrons with substances having a greater affinity for them, such as O2; include liberation of energy Oxidative phosphorylation- ATP formation in the mitochondria associated with the flow of e- through the respiratory chain Photons- quantum of visible radiation; a “packet” of light energy Photosynthesis- metablolic process carried out by green plants, by which visible light is trapped and the energy used to convert CO2 into organic compounds Photosystem- a light-harvesting complex in the chloroplast thylakoid composed of pigments and proteins Photosystem I- complex that absorbs light at 700nm, passing electrons to ferrodoxin and then to NADPH Photosystem II- absorbs light at 680nm, passing e- to the electron transport chain in the chloroplast Pigments- substances that absorb visible light Pyruvate oxidation- conversion of pyruvate to acetyl CoA and CO2 that occurs in the mitochondrial matrix in the presence of O2 (aerobic rx) Reaction center- group of e- transfer proteins that receive energy from light-absorbing pigments and convert it to chemical energy by redox reactions Redox (reduction-oxidation) reaction- chemical reaction in which one reactant becomes oxidized and the other becomes reduced Reduction- gain of e- by a chemical reactant; any reduction is accompanied by oxidation Ribulose bisphosphate carboxylase/oxygenase- see rubisco Rubisco- the enzyme that combines CO2 or O2 with ribulose bisphosphate to catalyze the first step of photosynthetic carbon fixation or photorespiration Wavelength- distance between successive peaks of a wave train, such as electromagnetic radiation