A Project report on PRO D U CTIO N O F LA CCA SE BY CURVULARIA SPECIES Completed at M IT C ON B IO P HAR M A , PUN E Submitted by VANDANA KUMARI DECLARATION I hereby declare that this project report is my own account of work. The content of this project work has not previously been submitted for degree at any tertiary education institution. Place : Pune Date: 18/01/11 Vandana kumari ACKNOWLEDGEMENT First I express my hearted Thanks to Rituraj Patil (HOD-MITCON) for his kind permission and inspiration to carry out this Project Work. I express my deep sense of Gratitude of the Guide Ms. Priya Bande and Ms. A.Pakhale who have been a great source of Inspiration and Guidance and Encouragement to successful completion of my Project Work. I express my sincere Thanks to HOD Dr. Jeyanti Rebecca Dept. of Industrial Biotechnology of Bharath University for her whole hearted support I express my hearted Thanks to my parents Mr. B.B.Singh & Mrs. Archana Singh for their whole hearted support and encouragement. I will be failing in my duty if I do not acknowledge with grateful thanks to the author of references and other literature refers to this Project Work. Last but not least I convey my sincere thanks to all staff members of MITCON for their support, guidance and encouragement. LIST OF ABBREVIATION 1. PDA :-Potato dextrose agar 2. YEPD:-Yeast extract peptone 3. MAX :- Maximum 4. C:-Celcius 5. ML :-Mililitre 6. M/ML :-Milli mole per litre 7. PCM :POTATO carrot medium 8. CD medium :Czpack dox medium ABSTRACT The project work focuses on the production of Laccase by curvularia sp.There are following steps involved in this project work. First is selection of organism, isolation of organism (curvularia lunata) from soil sample. Potato Dextrose Agar is used as media for growth of curvularia. After 3 days of inoculation colonies of fungus curvularia is observed. Next step is preparation of fermentation media. Fermentation media is prepared by YEPD(Yeast Extract Peptone Dextrose) in respective amount. Mycelium is obtained from colonies of fungus. Myceliun is introduced into YEPD medium. Culture is kept on rotary shaker incubator for five days. Laccase (Benzenodial Oxygen Oxidoreductase) activity test is done. ABTS method is used for detection of Laccase. Purification and characterization of Laccase is also performed by column chromatography. Sephadex column is prepared to purify the enzyme. Initial medium PH 4.0 is and cultivation temperature 30 C were found to be most suitable for maximum enzyme production. The optimum temperature for Laccase activity were found to 5.2 and 50 C respectively under optimum condition. Some divalent metal ions inhibited Laccase activity at very low concentration. INTRODUCTION The Tricopper site found in many laccases, notice that each copper center is bound to imidazole (color code: copper is brown, nitrogen is blue). Laccases (EC 1.10.3.2) are copper-containing oxidase enzymes that are found in many plants, fungi, and microorganisms. The copper is bound in several sites; Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. Type 1 copper is available to action of solvents, such as water. It can be displaced by mercury, substituted by cobalt or removed via a copper complexone. Removal of type 1 copper causes a decrease in laccase activity. Cyanide can remove all copper from the enzyme however re-embedding with type 1 and type 2 copper has been shown to be impossible. Type 3 copper however can be embed back into the enzyme. Laccases act on phenols and similar molecules, performing a one- electron oxidations, which remain poorly defined. It is proposed that laccases play a role in the formation of lignin by promoting the oxidative coupling of lignols, a family of naturally occurring phenols. Laccases can be polymeric, and the enzymatically active form can be a dimer or trimer. Other laccases, such as ones produced by the fungus Pleurotus ostreatus, play a role in the degradation of lignin, and can therefore be included in the broad category of ligninases. Because laccase belongs to the oxidase enzyme family it requires oxygen as a second substrate for the enzymatic action. Spectrophotometry can be used to detect laccases, using the substrates ABTS, syringaldazine, 2,6-dimethoxyphenol, and dimethyl-p-phenylenediamine. Activity can also be monitored with an oxygen sensor, as the oxidation of the substrate is paired with the reduction of oxygen to water. Laccase Activity Laccases do not release toxic peroxide intermediates. The four copper centers creates four monoelectronic oxidations of a substrate which is catalyzed by type 1 copper. From type 1 copper, the electrons are transferred to the trinuclear cluster of type 2 and type 3 copper. This is where the reduction of oxygen and release of water takes place. It is because of the various copper centers that allow the reduction of substrate to oxygen without generation of toxic intermediates. The products of oxidation can undergo non-enzymatic reactions such as cross linking of monomers, degradation of polymers and ring cleavage of aromatics. Crosslinking of monomers Both phenolic compounds and anilines generate radicals when oxidized by laccase. These radicals can form dimers, oligomers or polymers via a covalent bond between C-C, C-O or C-N. Degradation of polymers Laccase can degrade complex polymers such as lignin or humic acids. Reactive radicals generate cause cleavage of covalent bonds and formation of monomers. Because complex polymers are large it may create steric hindrance and prevent direct enzyme contact. Laccase can also oxidize small organic compounds or metals. These compounds once oxidized can cause radical degradation and depolymerization of larger polymers. Ring cleavage of aromatics Laccase is able to catalyze ring cleavage of aromatic compounds. Inhibition Laccase can be inhibited by small anions such as: azide, halides, cyanide, and fluoride. These anions bind to type 2 and type 3 copper and disrupts electron transfer via copper centers, therefore reduces activity. Metal ions, fatty acids, hydroxyglycine, and kojic acid can also inhibit laccase by causing amino acid residue changes, conformational changes or copper chelation. Applications and potential utility Laccases have been examined as the cathode in enzymatic biofuel cells. They can be paired with an electron mediator to facilitate electron transfer to a solid electrode wire. Laccases are some of the few oxidoreductases commercialized as industrial catalysts. The enzymes can be used for textile dyeing/textile finishing, wine cork making, teeth whitening, and many other industrial, environmental, diagnostic, and synthetic uses. Laccases can be used in bioremediation. Protein ligand docking can be used to predict the putative pollutants that can be degraded by laccase. Activity of Laccase in Wheat Dough Laccases have the potential to cross link food polymers such as proteins and nonstarch polysaccharides in dough. In non starch polysaccharides, such as arabinoxylans (AX), laccase catalyzes the oxidative gelation of feruloylated arabinoxylans by dimerization of their ferulic esters. These cross links have been found to greatly increased the maximum resistance and decreased extensibility of the dough. The resistance was increased due to the crosslinking of AX via ferulic acid and resulting in a strong AX and gluten network. Although laccase is known to cross link AX, under the microscope it was found that the laccase also acted on the flour proteins. Oxidation of the ferulic acid on AX to form ferulic acid radicals increased the oxidation rate of free SH groups on the gluten proteins and thus influenced the formation of S-S bonds between gluten polymers. Laccase is also able to oxidize peptide bound tyrosine, but very poorly. Because of the increased strength of the dough, it formed irregular bubble formation during proofing. This was a result of the gas (carbon dioxide) becoming trapped within the crust and could not diffuse out (like it would have normally) and causing abnormal pore size. Resistance and extensibility was a function of dosage, but at very high dosage the dough showed contradictory results: max resistance was reduced drastically. The high dosage may have caused extreme changes in structure of dough, resulting in incomplete gluten formation. Another reason is that it may mimic overmixing, causing negative effects on gluten structure. Laccase treated dough had low stability over prolonged storage. The dough became softer and this is related to laccase mediation. The laccase mediated radical mechanism creates secondary reactions of FA-dervived radicals that result in breaking of covalent linkages in AX and weakening of the AX gel. Use in Food Industry The hazing effect is a quality defect in beer. It is characterized by “cloudiness” in the final product. Laccase can be added to the wort or at the end of the process to remove the polyphenols that may still remain in beer. The polyphenol complexes, formed by laccases, can be separated via filtration and removes probability of the hazing effect from occurring. Because oxygen is not desired in beer, laccase can also remove excess oxygen and increase the storage life of beer. In fruit juices such as apple and grape, excess oxidation of phenolics causes negative effects on the taste, color, odour and mouthfeel. Laccasae has been proposed to delay the oxidation of polyphenols and stabiliz. Curvularia is a hyphomycete (mold) fungus which is a facultative pathogen of many plant species and of the soil. Most Curvularia are found in tropical regions, though a few are found in temperate zones. Curvularia defined by the type species C. lunata (Wakker) Boedijn. Curvularia lunata appears as shiny velvety-black, fluffy growth on the colony surface. C. lunata is distinguished by septate, dematiaceous hyphae producing brown, geniculate conidiophores. The poroconidiaare curved slightly to distinctly, transversely septate, with an expanded third cell from the pore end of the conidium. Curvularia can be easily distinguished from Bipolaris and Drechslera spp. since the conidia are non-distoseptate, that is, septate from edge to edge of the conidial wall. The teleomorphic state of the type species Curvularia lunata is Cochliobolus lunatus (Fam. Pleosporaceae, Ord. Pleosporales, Cla. Loculoascomycetes, Phy. Ascomycota). Curvularia is a fungal genus primarily native to tropical and subtropical regions, although some species live in temperate zones. These fungi are primarily of interest in their role as plant pathogens, as they can cause severe damage to a variety of crops. In some cases, Curvularia can also cause disease in humans or animals. These fungi particularly enjoy cellulose as a substrate, and they can be found growing on wood, decaying plant matter, and living plants. Some colonize grasses and cereal grains, and others can live in the soil. When a Curvularia colony develops, the fungi mass together to create a mat with a slightly woolly texture. These fungi are gray to black in color, typically darkening with age, and the underside of the colony will be a more pale white to gray. In the tropics and subtropics, Curvularia are endemic to soil and crops, and they can be difficult to eradicate. Some antifungal applications appear to be effective, but because the fungi can lie dormant in the soil, it may reappear in the future. In temperate zones, the fungi are often found indoors, where they like to grow on wood walls, and near hot springs, where they enjoy the warm temperatures. In fact, in some cases Curvularia can form a symbiotic relationship with plants, allowing the plants to grow closer to hot springs than they would be able to on their own. MATERIALS & METHODOLOGY Techniques used in production of Laccase : 1. ISOLATION OF CURVULARIA LUNATA Procedure Preparation of Media Natural Media Semisynthetic Media Liquid Media 2. NATURAL MEDIA:PDA(Potato Dextrose Agar) Components: i. Potato ii. Dextrose iii. Agar iv. Distilled Water v. Soil Sample 3. EQUIPMENT USED: i. Autoclave ii. Incubator iii. Weighing Machines iv. Measuring Cylinder v. Flask 4. PREPARATION OF SEMISYNTHETIC MEDIA: SB Broth Ingradient (Gram per Litre) i. Casein Enzymatic hydrolysate:5.0 gram ii. Peptic digest of animal tissue:5.0 gram iii. Dextrose: 40gram iv. Chloramphenicol: 0.05 gram Equipment Used i. Autoclave ii. 250 ml flask 5. PREPARATION OF LIQUID MEDIA: Components : i. 5gram of Carbon source ii. 1gram of KH2PO4 iii. 0.5gram MgSO4.7H2O iv. 0.2 gram NH4NO3 v. 0.1gram YEAST EXTRACT vi. 0.01 gram CaCl2 vii. 1mg CuSO4.5H20 viii.1 mg FeSO4.7H20 ix. 1mg MnSO4 x. Water:1 Litre PREPARATION OF FERMENTATION MEDIA: Fermentation media is required for growth of Curvularia lunata as well as production of extracellular enzyme Laccase. Components of Fermentation Media: YEPD(Yeast Extract Peptone Dextrose) 1,Yeast Etract:1%(m/v) 2 Peptone:2% 3 Dextrose: 1% 4 Distilled Water EQUIPMENT USED 1 Autoclame 2 Measuring cylinder 3 Weighing Machine 4 250 ml Flask PROCEDURE: Fementation Media is prepared. YEPD is autoclaved at 30 minutes. Laminar flow is used for inoculation of mycelium of Curvularia into the respective media. After a 5 day of incubation at 30 degree in a reciprocal shaker with an agitation frequency of 4.2Hz . The mycelium were harvested and supernatant was checked with Laccase activity .extracellular protein. All experiment were conducted in triplicate. PREPARATION OF LACCASE : The fungal culture was filtered through aWhatman filter paper no.1 to remove mycelia. The filtrate was passed through a sephadex column . A column is preequilibrated with phosphate buffer (10m mol/litre.PH 6.5) and Laccase was eluted from the column with the same buffer. 5 ml sample were collected and assayed for Laccase activity. ENZYME ASSAY : Laccase activity was assayed with guaicol as substrate. The reaction mixture contained 3.9 ml acetate buffer (10 m mol /L,PH 5.0),1ml guiacol (2 m mol/L) and 1.0 ml proprerly. Properly diluted enzyme solution was incubated at 50 C for 30 minutes. Absorbance was read at 450 nm. Guaicol was replaced with buffer in the blank. Enzyme activity was expressed in terms of unit (CU /ML) OBSERVATION Colonies of Curvularia on myceliumn disks plated on water agar and incubated at different temperature for 7 days Sporulation of colonies of Curvularia grown from spores shown on malt extract agar and incubated at different temperatures for 7 days Sporulation of mycelia disks of Curvularia plated on different agar media grown and incubated at 15o C temperatures for 7 days Sporulation of colonies of Curvularia grown from spores shown on different agar media and incubated at 24oC temperatures for 7 days Growth on different Nitrogen Sources Germination of spores harvested at weekly intervals from culture of Curvunaria store on water agar at 10oC temperatures for 7 days Germination of spores harvested on weekly intervals from culture of Curvunaria stored on Malt extract agar at 10oC temperatures for 7 days Colonies of Curvularia lunata grown after incubation of 3 days Growth was best in organic nitrogen sources with Glycine. RESULT AND DISCUSSION Growth Measurement :