key Name: _________________________________ Unit 6: Human Genetics Per. ______ Part A gene expression genome repressor proteins activation in eukaryotes by degree of uncoiling of DNA cell differentiation morphogenesis cancer o tumors benign malignant metastasis cancer (cont.) o carcinoma o sarcoma o lymphoma o leukemia causes of cancer o carcinogens o mutagens o oncogens o viruses Part B 1. sex determination Thomas Hunt Morgan sex-linked genes linkage groups chromosome mapping mutation o chromosome deletion inversion translocation nondisjunction o gene point mutations substitutions sickle-cell anemia frame shift mutations Part C genetic engineering restriction enzymes plasmids transplanting genes recombinant DNA transgenic organisms DNA fingerprints gel electrophoresis human genome project genetically engineered vaccines and crops 2. human genetics o pedigrees o Huntington’s Chorea multiple alleles polygenic traits sex-linked o colorblindness o hemophilia o Duchenne muscular dystrophy sex-influenced traits nondisjunction o Down Syndrome genetic screening/counseling o amniocentesis o PKU Part A: Gene Expression 1. Control of Gene Expression protein activation of a gene that results in the formation of a when transcription occurs a gene is “expressed” or “turned-on” ex. gene for blue eyes is “expressed” only in the iris of the eye genome: the complete genetic material contained in an individual repressor protein: inhibits a gene from being expressed (“turns off the gene”) 2. Gene Expression and Development Cell Differentiation: development of cells with o controlled by gene expression specialized -function Cancer: uncontrolled, abnormal cell division benign: no threat unless compressing a vital organ; in a single mass o tumor: abnormal group of cells from ex. fibroid cyst in uterus or breast, warts malignant: abnormal cells body metastasis: Kinds of Cancer: spread invade and destroy healthy tissue elsewhere in of cancer beyond original site o carcinoma: skin, lining of organs ex. lung cancer, breast cancer o sarcomas: bone and muscle tissue o lymphomas: solid tumors in blood-forming tissue and may cause o leukemia: uncontrolled production of white blood cells Causes of Cancer: o mutations that alter expression of genes spontaneous leukemia caused by carcinogens (substance that increases the risk of cancer) ex. smoking, asbestos, radiation viruses (HPV) o mutagen: agents that cause mutations Part B: Inheritance Patterns and Human Genetics 1. Chromosomes and Inheritance sex determination o Thomas Hunt Morgan o used Drosophila melanogaster = fruit fly o why did he use fruit flies? Large number of offspring Only 4 pairs of chromosomes Chromosomes are large an easy to see o of 4 pairs of chromosomes, one pair different in males than in females females: two chromosomes identical males: one chromosome looked like female and the other was shorter and Yshaped o Morgan called these sex chromosomes XX (female) XY (male) Cross a male with a female and give genotype and phenotype ratios: X Y X X XX XX XY XY Are Chromosomes the Same in Male and Female? Chromosomes in Female and Male. X X X Y 1. How many chromosomes are in the body cells of a male fruit fly? (Note: the large dots are chromosomes, too.) 8 2. How many chromosomes are in the body cells of a female fruit fly? 8 3 pairs 4. In the female fruit fly, how many of the pairs consist of two chromosomes that look alike? 4 pairs 3. In the male fruit fly, how many of the pairs consist of two chromosomes that look alike? 5. What names are given to each of the two unlike chromosomes in the male? X and Y 6. What is the name given to the two similar corresponding chromosomes in female? X and X Self Test Complete the following statements. 1. The number of chromosomes in the body cells of a fruit fly is 8 2. The male fruit fly has two sex chromosomes, called X and Y 3. The female fruit fly has two sex chromosomes, called X and X 4. A male fruit fly makes two kinds of sperm cells; one kind has the X chromosome, the other has the Y 5. The sex chromosome found in every egg is the X 6. When an egg is fertilized, a female will result if the chromosome combination is XX 7. A male will result if the chromosome combination is XY 8. In any population, the proportion of males to females is about 50/50 fertilized 10. The sex in humans and fruit flies that has unlike sex chromosomes is the male 9. The sex of the offspring is decided at the moment when the egg is 1. Chromosomes and Inheritance (cont.) o location of genes on a chromosome the farther apart two genes are, the more likely they will be separated by Chromosome map: diagram showing the crossing over Mutations: a change in DNA o Germ cell mutation: occurs in the organism’s gametes (sex cells); do not affect the organism; may be passed on to offspring o Somatic mutations: body cell mutations; will affect the organism; not passed on; two types: Chromosome Mutations: change structure of a chromosome or loss of entire chromosome deletion: loss of a piece of chromosome inversion: segment breaks off and reattaches in reverse order translocation: segment breaks off and attaches to another nonhomologous chromosome non-disjunction: failure of a chromosomes to separate correctly ex. extra chromosome or lacks a chromosome Gene Mutations: change in DNA of a single gene point mutation: substitution, addition or deletion of one nucleotide of a codon substitution: one nucleotide replaced by a different nucleotide ex. sickle cell anemia caused by a T being substituted by A; causes defective hemoglobin; sickle shaped red blood cells frame shift mutation: occurs when an addition or deletion causes the shifting of the group of three making a codon 2. Human Genetics difficult to study. Why? We grow over very long periods of time; harder to take care of; small amount of offspring Pedigree analysis o pedigree: family record that shows how a trait is inherited over generations Genetic traits and disorders o Single-allele traits: Dominant: Huntington’s Disease: forgetfulness and irritability in 30s-40s; loss of muscle control, spasms, mental illness, death Achondroplasia: dwarfism many fingers or toes Cataracts: clouding of the lens of the eye Polydactyly: Recessive: Albinism: lack of pigment in hair, skin, eyes Cystic Fibrosis: abnormal cellular secretions of thick mucus which accumulates in lungs Phenylketonuria (PKU): inability to metabolize phenylalanine in milk; PP and Pp = normal; pp= PKU build-up causes mental retardation babies tested; those with PKU not given phenylalanine in diet Tay-Sachs Disease: causes death by deterioration from lack of enzyme to breakdown fatty deposits on nerve and brain cells o Multiple Alleles: traits controlled by 3 or more alleles of the same gene ABO blood groups controlled by 3 alleles: IA, IB, i each person’s blood contains 2 of these alleles IA, IB are co-dominant (both expressed when together) and are both dominant to the i A type = IA IA,IAi B type = IB IB, IBi AB type = IAIB O type = ii Which cross could result in all four blood types in the offspring? Show results of cross below: IA i IB IA IB IB i i IA i i i Pedigree Studies Pedigrees are not reserved for show dogs and race horses. All living things, including humans, have pedigrees. A pedigree is a diagram that shows the occurrence and appearance, or phenotype, of a particular genetic trait from one generation to the next in a family. Genotypes for individuals in a pedigree usually can be determined with an understanding of inheritance and probability. In this investigation, you will (a) Learn the meaning of all symbols and lines that are used in a pedigree. (b) Calculate expected genotypes for all individuals shown in pedigrees. Procedure Part A. Background information The pedigree in Figure 20-1 shows the pattern of the inheritance in a family for a specific trait. The trait being shown is earlobe shape. Geneticists recognize two general earlobe shapes, free lobes and attached lobes (Figure 20-2). The gene responsible for free lobes (E) is dominant over the gene for attached earlobes (e). In a pedigree, each generation is represented by a roman numeral. Each person in a generation is numbered. Thus, each person can be identified by a generation numeral and individual number. Males are represented by squares whereas females are represented by circles. Part B. Reading a Pedigree In Figure 20-1, person’s I-1 and I-2 are the parents. The line which connects them is called a marriage line. Person’s II-1, 2 and 3 are their children. The line which extends down from the marriage line is the children line. The children are placed left to right in order of their births. That is, the oldest child is always on the left. 1. What sex is the oldest child? FEMALE 2. What sex is the youngest child?MALE Using a different pedigree of the same family at a later time shows three generations. Figure 20-3 shows a son-in-law as well as a grandchild. Generation I may now be called grandparents. 3. Which person is the son-in-law?II-1 4. To who is he married?II-2 5. What sex is their child? FEMALE Part C. Determining Genotypes from a Pedigree The value of a pedigree is that it can help predict the genes (genotype) of each person for a certain trait. All shaded symbols on a pedigree represent individuals who are homozygous recessive for the trait being studied. Therefore, person’s I-1 and II-2 have ee genotypes. They are the only two individuals who are homozygous recessive and show the recessive trait. They have attached earlobes. All un-shaded symbols represent individuals who have at least one dominant gene. These persons show the dominant trait. To predict the genotypes for each person in a pedigree, there are two rules you must follow. Rule 1: Assign two recessive genes to any person on a pedigree whose symbol is shaded. (These persons show the recessive trait being studied.) Small letters are written below the person’s symbol. Rule 2: Assign one dominant gene to any person on a pedigree whose symbol is un-shaded. (These persons can show the dominant trait being studied.) A capital letter is written below the person’s symbol. These two rules allow one to predict some of the genes for the persons in a pedigree. Figure 20-4 shows the genes predicted by using these two rules. To determine the second gene for the persons who show the dominant trait, a Punnett square is used. In Figure 20-4, we already know that the grandfather (I-1) is ee, if the grandmother (I-2) were EE; could any ee children like (II-2) be produced? A Punnett square shows this combination to be impossible. Thus, the grandmother must be heterozygous of Ee. 6. (a) Do the following Punnett squares to show the possible outcomes of persons I-1 & I-2. (b) Can an Ee parent and an ee parent have the results in generation II? yes (c) Can an EE parent and an ee parent have the results shown in Generation II?no 7. (a) Predict the second gene for person II-3. (Read the Punnett square.) Ee (b) Predict the second gene for persons II-4. Ee_ (c) Could child II-3 or II-4 be EE? no Explain. Dad can only give the e gene to the children in row II. To predict the second gene for person II-1, a different method must be used, since he could be either EE or Ee. 8. (a) Do the following Punned squares to show the possible outcomes of persons II-1 & II-2. (b) Can and EE person married to an ee person (II-2) have children with free earlobes? yes (c) Can an Ee person be married to an ee person have children with free earlobes? yes In this case, the second gene from person II-1 cannot be predicted using Punnett squares. Either genotype Ee or EE may be correct. When this situation occurs, both genotypes are written under the symbol (Figure 20-5) Predicting the second gene for III-1 results in her being heterozygous. Although her mother must provide her with one recessive gene, she has free lobes, so the second gene must be dominant (Figure 20-5). At some time in the future, if II-1 and II-2 have many more children, one might be able to predict the father’s second gene. For example, if they have ten children and all show the dominant free lobes, one could safely conclude that he is EE. If, however, they have some children with attached earlobes (ee), then he must be Ee When both parents show a dominant trait and their child or children all show a dominant trait, one cannot predict the second gene for anyone if only a small family is available. Examine the pedigree: 9. (a) Which Punnett square, A, B, or C, would best fit this family? B (b) Explain. It is the only punnett square that produces ee children. Analysis 1. Draw a pedigree for a family showing two parents and four children. (a) Include a marriage line and label it. (b) Include a children’s line and label it. (c) Make the oldest two children boys and the youngest two girls. 2. Fill out the following pedigree. Find the genotype for each person. Use B & b. Sex Linkage: o more genes are carried on the SEX chromosome = X-linked genes o sex-linked genes are on one chromosome; these are linked = inherited together ex. Red hair and freckles Polygentic Traits: ex. skin color is influenced by 3-6genes; control the amount of pigment (melanin) in the skin X-linked Traits: o Colorblindness: recessive; inability to distinguish colors (red/green) o Cross a carrier female with a normal male: XCY XcY XCXC XCXc XcXc o Hemophilia: recessive; bleeders disease; impaired ability of blood to clot o Duchenne Muscular Dystrophy: weakens and destroys muscle cells Sex-Influenced Traits: male or female hormones may influence gene expression ex. baldness controlled by gene B; dominant in males but recessive in females BB= bald in male and female Bb= bald in male, normal in female; caused by testosterone Non-Disjunction Disorders: failure of chromosomes to separate in meiosis o Monosomy X aka turners syndrome: 45 chromosomes; underdeveloped, sterile females o Trisomy X: XXX; super females; some retarded o Klinefelter’s syndrome: XXY; normal egg x XY sperm sterile, underdeveloped males o XYY: tall aggressive males, criminals? o Down Syndrome: Trisomy 21 extra chromosome 21 mild to severe retardation, facial features, muscle weakness, heart defects, short stature Detecting Human Genetic Disorders o Genetic screening: exam of person’s chromosomes ex. karyotype: picture of chromosomes blood test amniocentesis: testing of amniotic fluid from embryo chorionic villi sampling: sample tissue between mother’s uterus and placenta o Genetic counseling: talk to patients about genetic disorders and risks of having affected children Part C: DNA Technology 1. The New Genetics DNA technology can be used to cure diseases, make better crops, animals or drugs Manipulating Genes: o to isolate and transfer specific DNA segments, restriction enzymes o are used to cut a piece of DNA o single chains of DNA are crated with sticky-ends o sticky ends bind to complementary sticky ends from recombinant form out of DNA from 2 organisms o cloning vectors: carrier used to clone a gene and transfer it to another organism o plasmid: ring of DNA in a bacterium Transplanting Genes: o plasmids are used to clone a gene so that bacteria will produce a specific protein ex. insulin diagram: see page 32 o Steps: 1. restriction enzymes cut the segment of DNA from a human cell that contains the insulin gene and the circular plasmid in the bacteria 2. recombinant DNA is formed by combining the human and bacterial DNA segments 3. The loop of DNA is inserted into a bacterial cell 4. The bacterial cell will produce the insulin and be duplicated every time it divides o Transgenic organism: host receiving the recombinant DNA 2. DNA Technology Techniques DNA Fingerprints: o pattern of bands that make up fragments from an individual’s DNA Uses: comparing different species to determine how closely related compare blood, tissue at crime scene with a suspects blood establish relatedness or paternity Making a DNA Finger Print 1. DNA segment cut into pieces by restriction enzymes 2. gel electrophoresis separates the DNA fragments by size and charge diagram: see page 33 DNA fragments are placed in wells in a gel an electric current is run through the gel DNA fragments (- charge) migrate to the positive charged end of gel, not at the same rate smaller fragments migrate faster 3. Make visible only bands being compared by using radioactive probes and photographic film Human Genome Project: o Goals: determine the nucleotide sequence of the entire human genome (100,000 genes) map the location of every gene on each chromosome 3. Practical Uses of DNA Technology Producing Pharmaceutical Products: that are safer and less expensive than produced by conventional means Genetically Engineered Vaccines: o vaccine: solution containing a harmless version of virus or bacterium o new DNA technology can prevent a pathogen (disease causing agent) from harming someone that has received a vaccine (only rare cases) Increasing Agricultural Yields: o produce disease- resistant, weed- resistant, and insect- resistant crops o improves the quality and quantity of the human food supply o isolate genes from nitrogen-fixing bacteria and transplant to plants so they can be grown in nitrogen-poor soil without fertilizers