Unit 1: The Chemistry of Life Chapter 5 Macromolecules Macromolecule theme • Monomers • Polymers 1. State the empirical formula for carbohydrate. Explain what such a formula means. • • • • (CH2O)n Carbons, Hydrogens, & Oxygens Mostly we study the 6-carbons sugars Rings, not chains Recognize as dietary sugars, but have other uses 2. To what do the terms monosaccharide, disaccharide, and polysaccharide refer? What do all three have in common? • • • • • mono - one di – two oligo – several (mainly cell surfaces) poly – many All levels have the same empirical formula (CH2O)n 3. Explain what is meant by dehydration synthesis. What is the opposite process called? How are both important to most biological molecules? • Dehydration = loss of water; synthesis = to make – Make a molecule by dehydrating it • Hydro = water; Lysis = to break apart – Using water to break apart molecules • Both require specific enzymes • To live, we must build up molecules, and tear molecules down – EX: Eating carbos / waking up • Metabolism = A + C • Anabolism • Catabolism 4. List the important differences between starches and glycogen. Where would each be found? • Pg 72 • Starches string of glucoses – somewhat branched – form storage granules in PLANTS • Glycogen string of glucoses – highly branched – energy storage for animals (Fungi too) – found in the liver & muscles 5. What is it that makes cellulose strong? How is its strength further increased in plant fibers? Its arrangement makes cellulose strong (pg73) • Beta linkages create a sturdy, rigid structure • Hydrogen bonding then forms long, microfibrils – like a suspension bridge • Forms sturdy cell walls in plants ** Cellulose is dietary fiber – we can’t digest any of it, but it’s important to eat. Why? - We don’t have the enzyme to break the linkage! • How do cattle, deer, goats, etc. digest it? – They house microorganisms to do it (4 stomachs) 6. What is the role of chitin and how is it different from other carbohydrates? Chitin=exoskeleton of insects & arthropods • Very soft, but when combined w/ CaCO3, becomes very hard • Where does the CaCO3 come from? Water 7. List the essential parts of a triglyceride. • 1 glycerol and 3 fatty acid molecules Through what enzymatic process are triglycerides joined? • Dehydration synthesis What makes one triglyceride differ from the next? • Length of fatty acid chain, degree of saturation Which end of the triglyceride is more hydrophobic? • The long chain portion. 8. Distinguish between an oil and a fat and between a saturated fat, an unsaturated fat, and a polyunsaturated fat. Are unsaturated fats more common in animal tissue? Explain (pg75) . • Oil liquid at room temperature • Fat solid at room temperature • Saturated C-C single bonds, most H’s – Ex. Lard, steak fat • Unsaturated C=C, fewer H’s – Ex. Olive oil • Polyunsaturated many C=C’s • Sat. Fat more common in animal tissue – Need to be solid at normal temps! 9. Describe the general structure of phospholipids, and explain their arrangement into membranes. • Phosphate head (Hydrophilic) • 2 fatty acid chain tails (Hydrophobic) • One is saturated, one is not By a diagram of a phospholipid bilayer, indicate the hydrophobic and hydrophilic regions. Extracellular water Cytoplasm inside of cell 10. List the special uses of steroids. How do steroids differ structurally from other lipids? Steroids structurally different from fatty acids or lipids • They hate water – that’s why they’re lipids! • 4 linked carbon rings Examples • lanolin sheep’s wool, human hair • cholesterol in cell membrane, sex hormones – Allow flexibility in hair / membranes Cholesterol 11. What are six significant uses for proteins? (table 5.1) • • • • • • Enzymes reactions Energy although not preferred Immunity antibodies Structure / Support muscle, tendon, etc. Hormones insulin, epinephrine, prolactin Carriers hemoglobin carries O2 12. Carefully define the term protein. How is a protein different from a polypeptide? • • Proteins large, complex molecules made up of amino acids joined by dehydration synthesis reactions Polypeptide a string of A.A.‘s – transported in blood like this – cells take p.p.’s in and utilize the A.A.’s 13. What do all amino acids have in common? How do they differ? Each A.A. has a carbon with four groups • amine group (NH2) • carboxyl group (COOH) • Hydrogen • R group ** How many A.A.’s? ** How many are essential? • • • • • • • • • • • • • Essential Isoleucine Leucine Lysine Methionine Phenylalanine Threonine Tryptophan Valine Nonessential Alanine Asparagine Aspartate Cysteine Glutamate Glutamine Glycine Proline Serine Tyrosine Arginine Histidine 14. Describe the four levels of organization possible in a protein, and explain what forces are involved at each level. (pg 82) Primary sequence of amino acids • sequence will determine future shape Secondary Secondary segments of the polypeptide fold and coil in patterns – – • alpha helices beta sheets What forces? – H-Bonds Tertiary bends and twists cause a three dimensional shape. Why? • a. nonpolar R groups group together away from the polypeptide • b. H-bonds can form between polar R groups • c. 2 sulfhydryl groups can form a disulfide bridge • d. charged R groups can attract or repel Tertiary Quaternary Quaternary two or more polypeptide chains interacting w/ each other • same forces as tertiary 15. How do collagen and hemoglobin differ in reference to size, shape and function? Collagen Hemoglobin Fibrous Globular Mostly helices Beta sheet core Small Large (4 subunits) Structural in function Carrier molecule Tendons, ligaments, muscle coverings In red blood cells – carries O2 16. What is the process which links two amino acids together? Describe the reaction. • • Dehydration Synthesis But you knew that!!!! 17. What is denaturation? How or when may it occur? What does a protein lose when it becomes denatured? Denaturation when a protein unravels or loses its shape (becomes inactive) • -normally a polypeptide will spontaneously arrange itself, however… Changes in: • pH • salt concentration • temperature • other environmental aspects 18. Identify the three types of monomers found in a nucleotide. • 5-carbon sugar • Phosphate • Nitrogenous base • DNA & RNA