Evolution of Living Systems • Introduction – Power of the theory: diversity and similarity of life forms – Theory and a Gift • Historical context of evolution • Processes and mechanisms of evolution • Origin and evolution of life – Earth – Astrobiology – Classification • Specific topics for discussion – Viruses – Evolution of humans – Evolution in action: literally “as you sleep” Take-Home Messages • Darwin, Voyage of the Beagle and the Origin of Species: power of observation coupled with intuition • Natural selection operates on genetic variation at the level of populations and over time gradually changes the gene pool, leading to microevolution (populations) and/or macroevolution (species) • Mechanism of evolution underpins our understanding of origin of life of earth, evolution and classification of organisms, and emerging sense of origin of life forms elsewhere in the universe (astrobiology) • “As you sleep”, evolution is in action, and notable examples are GMO’s, pesticide resistance in plants and animals, and antibiotic resistance in microbes • Theory of evolution extraordinarily provides the mechanism to explain two sides of the same coin: diversity and similarity of living systems • Theory of evolution is a gift of monumental importance in the life sciences and its importance has only grown since Darwin’s seminal publication in 1859 Evolution of Living Systems • Introduction – Power of the theory: diversity and similarity of life forms – Theory and a Gift • Historical context of evolution • Processes and mechanisms of evolution • Origin and evolution of life – Earth – Astrobiology – Classification • Specific topics for discussion – Viruses – Evolution of humans – Evolution in action: literally “as you sleep” Introduction • Two sides of the same coin – Diversity of life forms – Similarity of life forms (you are a worm) • Theory of evolution – What is a theory? – Define theory of evolution • Species arise/evolve gradually from ancestral species • Mechanism is natural selection • Gift to biology – Unifying theory around which to explain the diversity and similarity • Evolution preserves traits that confer an advantage • Evolution also adopts new traits that confer an advantage – Impressive and substantial underpinning to the life sciences (ecology, environmental sciences, genetic engineering, astrobiology, etc.) Evolution of Living Systems • Introduction – Power of the theory: diversity and similarity of life forms – Theory and a Gift • Historical context of evolution • Processes and mechanisms of evolution • Origin and evolution of life – Earth – Astrobiology – Classification • Specific topics for discussion – Viruses – Evolution of humans – Evolution in action: literally “as you sleep” Historical Context: Darwin • Voyage of the Beagle on the HMS Beagle (1831) – Age 22 as naturalist to catalogue plants and animals (simply observe and document) – Convention at the time: static view (preordained) – Frame of reference for Darwin: UK landscape about as bland as UK food Notable Observations by Darwin • South American diversity of landscapes – – – – Brazilian rainforest Grasslands/savannas of Argentina Dry deserts of Terra del Fuego (tip) Towering mountains of the Andes on west coast • Flora and fauna distinct from Europe and UK • Battery of structures (plants and animals) that had intuitive value in the environment (adaptations) • Seeding of idea: living systems are not static/preordained but vary as a function of the environment Observations (cont’d) • Galapagos Islands (key event to Origin of Species) – Volcanic series of islands of Ecuador and Peru (800 km); recent geological origin – Fauna (birds, tortoises, etc.) • not observed anywhere else • Distinct lineage to species on S. American mainland (e.g., 13 species of finches) – Seeding of idea: fauna arrived from mainland and the diversified Darwin in England (1836) • Two seminal ideas in 1830’s – Malthus: population growth far exceeds available resources (all organisms) – Competition for limited resources (food, water, light, mates) limits number of offspring that survive (e.g., maple tree produces 1000’s of seed of which perhaps 10 germinate and grow – 0.0001%) • Hypothesis: Environment drives the origin of species via the gradual accumulation of traits that steadily improve survival over time (centuries to millennia) Darwin and Natural Selection (1840) • Idea No. 1: Organisms differ in their success in reproduction and therefore contribute differently to future generations • Idea No. 2: Driving force for this differential success is natural selection that acts on the variability among individuals • Product: Evolution of adaptations to enhance success (fitness) – Relate back to the Voyage of the Beagle (1831) Darwin: Origin of Species (1859) • Note elapsed time from first observation (1831) to publication (1959) • Two principal tenets – Species evolve gradually from ancestral species – Mechanism is natural selection • Theory of Evolution as a gift to biology – Origin of diversity is _____________ – Origin of similarity is _____________ • Consequences for a host of other aspects of the life sciences Heads: Diversity Tails: Similarity at the Molecular Level Evolution of Living Systems • Introduction – Power of the theory: diversity and similarity of life forms – Theory and a Gift • Historical context of evolution • Processes and mechanisms of evolution • Origin and evolution of life – Earth – Astrobiology – Classification • Specific topics for discussion – Viruses – Evolution of humans – Evolution in action: literally “as you sleep” Processes and Mechanisms • Misconception that individuals evolve – Individuals develop NOT evolve • Populations and species evolve (key levels of hierarchy) Kingdom Family Species Populations Individuals Organs • Evolution at the population level is called microevolution • Evolution at the species level is called macroevolution Concept of Fitness • Fitness = relative contribution of an individual to the next generation – Positive fitness – Negative fitness • Contrast fitness to “survival of the fittest” • Contrast fitness to “struggle for survival” • Example of sexual dimorphism in animals – Ornate plumage in birds attracts mates – Ornate plumage also attracts predators – Positive fitness: contribution to the next generation Variation in Fitness • Organisms vary in their morphology, physiology and biochemistry • Without variation, no differential fitness as all individuals are the same • Source of variation is genetics (yet to be discovered) – Inheritance of traits (1860’s) – DNA (1950’s) – Gene sequences (1970’s) Summary of Mechanism (1940’s) • Two cardinal foundations of evolution – Natural selection as presented by Darwin – Individuals differ genetically in their fitness • Result: gene pool of the next generation is a consequence of the action of natural selection on inherited variation at the level of populations First Generation Gene Pool Selection Fitness Gene Pool Second Generation Gene Pool N>100 Generations Gene Pool N>1000 Generations Gene Pool Microevolution Macroevolution Speciation Figure 24.14 24-511 Large-Scale Changes: Global Selective Agents • Progressive physical/chemical changes – – – – – Carbon dioxide in the atmosphere Oxygen in the atmosphere Ultraviolet radiation in the atmosphere Breakup of Pangeae Climate change today • Catastrophic physical/chemical climate change – Asteroid impacts (dinosaurs) • Instantaneous biological changes – Evolution of enzymes – Endosymbiosis and Lynn Margulis Earth’s Selective Agents in the Atmosphere Figure 24.4 24-507 Large Scale Physical Changes: Breakup of Pangeae Figure 19.19b 19-381b Geographical Isolation and Evolution: Darwin and the Galapagos Figure 19.19a 19-381a Endosymbiosis: Lynn Margulis Figure 24.3 24-506 Evolution of Living Systems • Introduction – Power of the theory: diversity and similarity of life forms – Theory and a Gift • Historical context of evolution • Processes and mechanisms of evolution • Origin and evolution of life – Earth – Astrobiology – Classification • Specific topics for discussion – Viruses – Evolution of humans – Evolution in action: literally “as you sleep” Origin and Evolution of Life on Earth Origin of Life in the Universe: Astrobiology • Chemicals of life – Information brokers: nucleic acids and nucleotides – DNA and RNA – Carbohydrates (carbon skeletons for polymers) – Lipids (membranes) – Proteins (enzymes) • Medium for life is water (H2O) • Chemicals for life are common in the Universe and environment (temperature) is commonplace • Probability: extremely-extremely high that life has originated and evolved elsewhere in the Universe at multiple times • Panspermia hypothesis: life on Earth originated elsewhere in the Universe and was transported here Panspermia Progression of the Sciences Leading to Astrobiology Habitability of Extraterrestrial Systems Copernican Revolution Astrobiology Sun-Centered World Revolutions in Physics, Chemistry, Geochemistry, and Life Sciences Earth-Centered World Origin and Evolution of Life: Classification Domain Bacteria Domain Archaea Common Ancestor (4 - 4.5 Billion Years Ago) Domain Eukarya Classification of Life on Earth Evolution of Living Systems • Introduction – Power of the theory: diversity and similarity of life forms – Theory and a Gift • Historical context of evolution • Processes and mechanisms of evolution • Origin and evolution of life – Earth – Astrobiology – Classification • Specific topics for discussion – Viruses – Evolution of humans – Evolution in action: literally “as you sleep” Illustration of a virus Figure 24.28 24-519 Viral nucleic acid and a host cell Figure 24.29 24-520 Evolution of Humans Figure 24.17 24-514 Evolution in Action “As You Sleep” • Antibiotic resistance in microbes – 100+ antibiotics since 1940’s (penicillum) – Generation time for microbes and intense natural selection for resistance • Industrial melanism in moths – White versus dark colored moths in UK and pollution (selection is predation by birds) • Herbicide resistance in weeds • Cockroaches resistant to insecticides • Genetically Modified Organisms (GMO’s) Take-Home Messages • Darwin, Voyage of the Beagle and the Origin of Species: power of observation coupled with intuition • Natural selection operates on genetic variation at the level of populations and over time gradually changes the gene pool, leading to microevolution (populations) and/or macroevolution (species) • Mechanism of evolution underpins our understanding of origin of life of earth, evolution and classification of organisms, and emerging sense of origin of life forms elsewhere in the universe (astrobiology) • “As you sleep”, evolution is in action, and notable examples are GMO’s, pesticide resistance in plants and animals, and antibiotic resistance in microbes • Theory of evolution extraordinarily provides the mechanism to explain two sides of the same coin: diversity and similarity of living systems • Theory of evolution is a gift of monumental importance in the life sciences and its importance has only grown since Darwin’s seminal publication in 1859 Omissions from Chapter 24 • Classification (pp 640-650)