Mod8-C Introduction to Lake Surveys - Basic

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Introduction to Lake Surveys

Basic Water Quality Assessment

Unit 3 Module 8

Part C Lake Sampling

Objectives

Students will be able to:

 explain methods used for collecting water, sediment and aquatic organisms.

identify reasons for collecting water and sediment samples.

compare and contrast the characteristics and use of discrete water samplers, integrated water samplers, grab samples and pumps. explain methods used for collecting contaminants and microbes.

utilize guidelines to determine the size of the water sample needed to conduct specific analyses.

demonstrate specified labeling techniques.

describe the different methods of sediment sampling.

categorize aquatic organisms by size.

describe procedures used in sampling phytoplankton/algae, periphyton, zooplankton, and benthic invertebrates.

 compare and contrast direct and indirect quantitative analysis with qualitative analysis used to study phytoplankton.

classify periphyton by the substrates they grow on.

compare and contrast quantitative and qualitative analysis used to study periphyton, zooplankton, and benthic invertebrates.

describe procedures used in sampling aquatic vegetation.

explain the importance of diatoms in determining water quality.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s2

Basic water quality assessment

These slides focus on learning basic field techniques used by limnologists:

 Morphometry - estimating critical lake basin measurements

Field Profiles - physical and chemical parameters measured from top to bottom of the water column

Sampling – collecting water, sediments, and aquatic organisms

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s3

Lake sampling

 This module contains information about the basic techniques needed to perform a baseline characterization of a lake.

 Learn how to collect water, sediment and aquatic organisms from different habitats.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s4

Lake sampling

Water samples collected for:

 major ions

 nutrients

 chlorophyll-a, phytoplankton

 total suspended solids, turbidity color, organic carbon, biochemical oxygen demand

Iron (Fe) and other metals (special case mercury-

Hg)

 organic contaminants (PCBs, PAHs, pesticides, hydrocarbons)

 bacteria (fecal coliforms, E. coli and other pathogens)

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s5

Lake sampling

Sediment samples collected for:

 bulk properties nutrients

 contaminants (heavy metals, organics) organisms

 paleolimnological studies of lake history (fossil algae, zooplankton, insects, pollen)

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s6

Lake sampling

Aquatic Organisms:

Phytoplankton

Zooplankton

Benthos and sediment

Aquatic vegetation

 Fish and fish habitat assessment

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s7

Water sampling

 Conventional

 Automated water sampling

Contaminants

Microbes

How much to collect ?

 Sample preservation and storage

 Where to sample ?

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s8

Water sampling – conventional

Conventional:

Discrete water samplers

 Van Dorn, Kemmerer, Go-flow, Niskin and other closing bottles that collect water samples at discrete depths

Integrated water samplers

 Tubes that composite water from the surface to a set depth

Grab samples

Dipping a bottle at the water surface

Pumps

 Can provide discrete or integrated samples

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s9

Water sampling – discrete samplers

 Uses bottles that have external trip mechanisms that close the bottle at depth.

 Requires a carefully metered or measured, nonstretching rope or cable

 nylon is notorious for stretching over 10% tightly braided cotton or synthetic “non-stretch” sail rigging lines (<5% stretch) work well

 research vessels with winches use steel cable

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s10

Water sampling – devices

 Which one to use?

CTD with Rosette

Niskin

Developed by: E. Ruzycki and R. Axler

Van Dorn

Updated: 12-14-03

Kemmerer

U3-m8c-s11

Water sampling - conventional

 The closing mechanism on the sampler is triggered by dropping a weight called a messenger down the line

 Make sure the line is vertical; attach appropriate weights if it is angled due to currents or boat drift www.wildco.com

Updated: 12-14-03 Developed by: E. Ruzycki and R. Axler U3-m8c-s12

Water sampling – integrated samplers

 Integrated water samplers:

 Used to collect water representing an entire column of depths (e.g., 0 to

2 m) and mix it into one composite sample.

 Simple to use and inexpensive to make

 Can be made with rigid PVC or flexible tubing

Many state long-term monitoring programs use a 2 meter sampler since this stratum is where most of the algal activity is during the stratified period.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s13

Water sampling – integrated samplers

 Method

Tube is lowered to desired depth

Surface end is capped to allow air pressure to hold the water in the tube

 Bottom end of tube is raised, cap removed and sample is allowed to flow out into a bottle or carboy

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s14

Water sampling – grab samples

 Sometimes it is OK just to dip a bottle into the water to sample.

 Usually, this is the method of choice for collecting contaminants and bacteria (while wearing clean and sterile gloves).

 This is a good method to use to sample a surface algal scum.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s15

Water sampling – pumps

Pump types

Peristaltic pumps

Bilge pumps and submersible pumps are also sometimes used

Developed by: E. Ruzycki and R. Axler http://www.forestry-suppliers.com

Updated: 12-14-03 U3-m8c-s16

Water sampling – pumps

Advantages

 Greater volumes at discrete depths

Shallow lake sampling without disturbing sediments

Samples from depth can be collected with little or no exposure to the atmosphere (i.e., anoxic sample)

 Good for trace elements and organics because sample only comes in contact with the tubing (silicone or teflon)

Disadvantages

Requires power

Head pressure – pump must be able to overcome hydraulic head to pull up water from depth over the side of the boat.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s17

Water sampling – automatic samplers

 Primarily for stream, estuary and storm water collection

 Usually triggered remotely:

Phone call via modem

Precipitation or high flow

 Water quality parameter measured with an automated sensor exceeds a preset level

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s18

Water sampling – contaminants - metals

Mercury (Hg) in water

 Equipment cannot have metal or rubber components

 Containers require special preparation to ensure no

Hg contamination

Clean hands/dirty hands technique

Usually, but not always, tissue and sediment sampling do not require “ultra-clean” techniques

Other priority pollutant metals

 Usually, but not always, less stringent protocols than for Hg because problem levels only occur when concentrations in water are much higher than for Hg (see notes)

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s19

Water sampling – contaminants - organic

Organic contaminants

PCB’s, PAH’s, pesticides, etc.

Containers specially cleaned with solvents (hexane, acetone, methanol…)

 Glass or teflon bottles in most cases

Aluminum foil, solvent cleaned, for fish tissue

Sediments stored in glass jars using plastic or teflon utensils

 Sometimes bake (> 550 o C) glassware to vaporize trace organic chemicals

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s20

Water sampling - contaminants

 Clean hands/dirty hands (CH/DH) method should be used for collecting and processing samples vulnerable to trace contamination by metals or trace organic compounds.

 CH/DH are required when collecting samples to be analyzed for metals (e.g.,

Hg) and other trace organic contaminants and inorganic elements.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s21

Water sampling - microbes

 Sterile technique:

 Containers must be sterilized by autoclaving or with gas used to kill microbes

 Take care not to contaminate the container

 Water samplers should be swabbed with 70 % alcohol

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s22

Water sampling – microbes

 Grab samples taken with sterile containers

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s23

Sampling – how much water do you need?

 Depends on the parameters to be analyzed

 Chlorophyll and TSS often require the greatest volume (>

1L)

 Often depends on how productive the system is

Better to be safe and have too much water rather than too little

Also depends on how practical it is to carry out large volumes of water

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s24

Suggested sample volumes chlorophyll

Analyte

Analyte/ volume table

Volume needed

>500 mLs

TSS total phosphorus total nitrogen anions

Dissolved nutrients

Total and dissolved carbon

Metals

Often > 1 L

200 to 500 mLs

~ 100mLs

~60 mLs

~60 mLs color, DOC ~60 mLs

Updated: 12-14-03 Developed by: E. Ruzycki and R. Axler U3-m8c-s25

Lake sampling – filling the bottles

 Rinse containers with a small amount of sample, discard, then fill with fresh sample

 Fill bottles completely to eliminate head space

(unless the bottles are going to be frozen immediately)

 If using cubitainers put the cap on loosely, squeeze out all of the air, then tighten the cap

 Leave space in bottles that are to be frozen

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s26

Lake sampling – sample bottles

 Cubitainers work well for bulk samples that are to be split and processed later in the laboratory.

 High density polyethylene wide mouth bottles (60 to 1 L volume) work well for most analytes.

They freeze well, don’t crack and the wide mouth is easy to fill.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s27

Lake sampling – sample labeling

 An unlabeled sample may as well just be dumped down the drain.

 Use good labels not masking tape, etc.

Poor labels often fall off when frozen samples are thawed.

 Use permanent markers NOT ball point pens, pencils in a pinch

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s28

Lake sampling – sample labeling

 A simple sample label with the minimum amount of information needed…

WOW project

Shagawa Lake 7/26/02 1m

Site, date, depth

RAW, frozen

Sample processing and preservation info

Often, much more information may be needed by the laboratory performing your analyses. You will also need to supply a chain of custody form.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s29

Sediment sampling http://www.fdlrez.org/nr/environmental/water.htm

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s30

Sediment sampling

 Dredges

Commonly used to grab a bottom sediment sample in lakes, estuaries and slower moving rivers

 Collect soft sediments (mud and muck) for sieving out benthic organisms and also obtaining bulk sediment characteristics

Common types

Ekman

Peterson

Ponar

Quantitative corers

Box corers

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s31

Sediment sampling – Ekman dredge

Photos of sediment samplers www.wildco.com

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s32

Sediment sampling – Ekman dredge

 small, light, easy to trigger by messenger (usually)

 stainless steel – usually OK for contaminants

 best for muck, soft mud and silt where a relatively undisturbed sample down to 15 cm or more may be collected

 most common size = 6 inch cube (15 cm)

 not as good for sand; if sediment is compacted, or if much gravel, rocks, or large debris is present, the heavier Peterson or Ponar dredge is preferred

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s33

Sediment sampling – Ekman dredge

 This animation of the

Ekman dredge, illustrates the chain of events during use.

Developed by: E. Ruzycki and R. Axler http://www.cee.vt.edu/program_areas/environmental/teach/smpr imer/dredges/dredges.html

Updated: 12-14-03 U3-m8c-s34

Sediment sampling – Ekman dredge

Sample collection photos

Extruding (sub-coring)

Into the baggie…

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s35

Sediment sampling – Ekman safety

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s36

Sediment sampling – Peterson and Ponar

 usually require winches

 can sample coarser material than the

Ekman (small woody debris and gravel) photos

Peterson

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03

Ponar www.wildco.com

U3-m8c-s37

Sediment – “quantitative” corer

 variety of devices to collect undisturbed cores www.wildco.com

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s38

Sediment sampling – box corers

 Used for large lake and oceanographic research

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s39

Sampling aquatic organisms

 Learn how to collect water, sediment and aquatic organisms from different habitats.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s40

Sampling aquatic organisms – algae

 Phytoplankton (float freely in the water)

 Periphyton (attached to aquatic vegetation, rocks, wood and other substrates)

 Benthic algae (grow on the lake bottom/sediments); also sometimes called periphyton www.duluthstreams.org/understanding/algae.html

Developed by: E. Ruzycki and R. Axler www.cawthron.org.nz/periphyton_image.htm

Updated: 12-14-03 U3-m8c-s41

Sampling aquatic organisms – zooplankton

Zooplankton:

 Crustaceans (Cladocerans, copepods)

Rotifers

Protozoans, ciliates

 Aquatic insects (e.g., Chaoborus) www.aims.gov.au/pages/research

/hatchery-feeds/hfa-01.html

http://cgee.hamline.edu/see/questions/dp_biosp here/bios_place/dp_bios_place_ocean.htm

Developed by: E. Ruzycki and R. Axler http://lsda.jsc.nasa.gov/scripts/cf/res ult2.cfm?mis_index=110 photo source: North American Benthological Society

Updated: 12-14-03 U3-m8c-s42

Sampling aquatic organisms - benthos

 Benthic macroinvertebrates

Aquatic insects (adults and larvae)

Leeches

Crayfish

Mussels, snails http://www.usask.ca/biology/skabugs/ http://www.usask.ca/biology/skabugs/ http://www.usask.ca/biology/skabugs/ http://www.usask.ca/biology/skabugs/

Developed by: E. Ruzycki and R. Axler http://www.usask.ca/biology/skabugs/

Updated: 12-14-03 U3-m8c-s43

Sampling aquatic organisms

 Aquatic macrophytes

Submergent

Emergent

Floating

Bacterioplankton

Fish

Paleolimnology- reconstructing historical biological communities

 Algae (usually diatoms)

Zooplankton

Benthic invertebrates

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s44

Sampling aquatic organisms

 An alternate way of grouping aquatic organisms:

 Plankton (open water communities) = phytoplankton and zooplankton

 Benthos (bottom communities) = periphyton, benthic macroinvertebrates, aquatic macrophytes

 Fish (organisms that go where they choose)

 Dead stuff = detritus

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s45

Sampling aquatic organisms – by size

 Most plankton sampling techniques are size selective (based on mesh size).

 Phytoplankton range in size from 0.2um to > 200 um (from bacteria sized to colonies and filaments easily seen by the human eye).

 Zooplankton range from single-celled protozoans,

< 80 um rotifers, to crustaceans and insects (up to millimeters in length).

www.aims.gov.au/pages/re search/hatchery-feeds/hfa-

01.html

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s46

Sampling aquatic organisms – by size

 Terminology is often confusing

 Nannoplankton: < 60

 m

 Net plankton: > 80

 m

 From Wetzel 2001:

 picoplankton: 0.2 to 2.0

 m

 ultraplankton : 2 to 20

 m microplankton: 20 to 200

 m; usually refers to phytoplankton

 Macroplankton: > 2mm (2000 um) and up to cm in length

 Densities are expressed as:

 individuals per unit volume (#/L)

 biomass or weight (mg/L)

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s47

Sampling aquatic organisms – by size

Micron Size Plankton Classification

Reference table of sizes ranges

1000 Largest zooplankton and icthyoplankton (larval fish)

118

80

63

10

750

600

500

363

243

153

Larger zooplankton and icthyoplankton

Large zooplankton and icthyoplankton

Small zooplankton and icthyoplankton

Large microcrustacea

Microcrustacea

Microcrustacea and most rotifers

Small rotifers

Net phytoplankton and net zooplankton

Large nannoplankton and large diatoms

Small nannoplankton

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s48

Sampling - algae/phytoplankton

Phytoplankton (float freely in the water)

Periphyton (attached to aquatic vegetation, rocks, wood and other substrates)

Benthic algae (grow on the lake bottom/sediments); also sometimes called periphyton

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s49

Sampling - algae/phytoplankton

I. Goals of analysis

1.

2.

Quantitative, direct; biomass, cell density

Quantitative, but indirect; measuring chlorophyll concentration

3.

Qualitative; presence/absence, dominance

II. Sampling

1.

2.

Methods

Frequency

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s50

Sampling - algae/phytoplankton

III. Ancillary information

IV. Preservation methods:

IV. Counting methods:

 taxonomic guides counting chambers, slides

 microscopes

Archiving

V. Monitoring for toxic algae

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s51

Phytoplankton – I. Goals of analysis

1.

Quantitative analysis (direct):

For monitoring and research purposes

Requires a high level of expertise

 The cost (~$250/sample) and time involved are usually too high for a typical water quality assessment

 Typically surface water (0 m) or a 0-2 m composite is collected for long-term monitoring

(because noxious scums of blue-greens collect in surface water; site of water contact recreation)

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s52

Phytoplankton – I. Goals of analysis

2.

Quantitative analysis (indirect):

 such as chlorophyll concentration, provide an excellent index of the total amount of phytoplankton, but not what species are actually present.

 A cost-effective strategy for many long-term monitoring efforts is to combine chlorophyll data with periodic qualitative community structure estimates.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s53

Phytoplankton – I. Goals of analysis

3.

Qualitative analysis

Yields presence/absence information

Costs less to analyze

 Still requires taxonomic expertise but goals of analysis are often different than quantitative

(i.e., ID to genus level is often enough) or even to Class (blue-greens, diatoms, greens etc.)

 Collected as a whole water sample or by plankton net

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s54

Phytoplankton – II. Sampling

1.

Methods

Whole water; integrated or grab sample

Nets: mesh size appropriate to analysis goals

 10 um mesh will capture most phytoplankton; clogs easily however

 Blue-green algal scum can often be sampled by dipping a sample bottle – but is effected by:

 time of day wind conditions

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s55

Phytoplankton – II. Sampling

Images of phytoplankton samplers www.wildco.com

Integrated (whole water) sampler http://www.fdlrez.org/nr/environmental/water.htm

Van Dorn (whole water) sampler

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03

Plankton net

U3-m8c-s56

Phytoplankton – II. Sampling

2.

Frequency

Weekly to bi-weekly sampling is necessary to capture the seasonal dynamics of phytoplankton and to quantify abundance and biomass.

 Monthly may be adequate to provide an overall picture of the changes occurring in the ice-free growing season when water quality criteria are usually most critical.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s57

Phytoplankton – III. Ancillary information

 Chlorophyll

The most common estimator of algal biomass

Ideally best to have both chlorophyll and algal community identification

 More sophisticated techniques are becoming more available for major algal groups via detailed pigment analysis

Other important data

 Note any unusual odors when sampling

Secchi depth and nutrients, silica

Temperature, DO, and light profiles

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s58

Phytoplankton – IV. Sample preservation

Lugol’s Iodine

 Store in airtight glass container

Store in darkness (light sensitive)

Stains starch a dark color which is useful for identifying green alga

 Add enough to make 1% solution (~ 0.5 mL to 50 mL sample yields the color of a fine brandy)

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s59

Phytoplankton – IV. Sample preservation

 Other preservatives:

 acid formalin solution (FAA)

Gluteraldehyde

 These are known or suspected carcinogens and

OSHA and state regulations for the workplace should be checked before use

 Long-term archiving may prove useful to identify trends in species composition or even changes in morphology

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s60

Sampling - periphyton

 Periphyton (attached to aquatic vegetation, rocks, wood and other substrates)

 Benthic algae (grow on the lake bottom/sediments); also sometimes called periphyton

Photo source: Tahoe Research Group, U California-Davis

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s61

Sampling - periphyton

 Periphyton are algae attached to solid substrates; bottom sediment, rocks, twigs, beer cans, VW Beetles

These benthic algae are classified by the substrates that they grow on:

 Epilithic- on rock or other non-living substrate

Epiphytic- on plants

Epizoic- on the surface of an animal

Epipelic- on soft organic or silty sediments

Episammonic- on sand

Epirefusic- on garbage in the lake

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s62

Periphyton - sampling

I.

Goals of analysis

1.

Quantitative:

 biomass, chlorophyll (standing crop) per unit area, species ID, AFDW, organic matter

2.

Qualitative

 presence/absence, relative abundance, dominance

II.

Sampling methods

III.

Preservation

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s63

Periphyton – I. Goals of analysis

Do you want to estimate the actual in situ (i.e., in place) amount of periphyton or do you want a index of how well periphyton might grow at one site relative to another?

 In-situ sampling:

 remove all the material in a prescribed area

 Artificial substrates:

 provides easily calculated areal estimates, are cheap, and easy to deploy / retrieve

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s64

Periphyton – II. Sampling methods

 Artificial substrates (these are slide holders)

Before…

Developed by: E. Ruzycki and R. Axler

….. and after

Updated: 12-14-03 U3-m8c-s65

Periphyton – II. Sampling methods

 One way to scrape a known area is to lay a plastic 35 mm slide (film removed) over the rock and scrape off the material within the slide area scrub area =

2.3cmX3.5cm=8cm2

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s66

Periphyton – II. Sampling methods

Visual of matter taken from a rock

Rocks don’t always look like they have much on them

Nearly all the stuff scrubbed off this rock was organic matter –most of it living algae

S.Loeb and J.Reuter images

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s67

Periphyton – II. Sampling methods

 Resulting material from a rock scrub (to the right) containing:

 Macroinvertebrates

Detritus

Fungi

Bacteria as well as algae

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s68

Periphyton – II. Sampling methods

Photos of sampling methods http://www.nmu.edu/wwwedgar/biology/web/Strand/wave%20zone.htm

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s69

Periphyton – III. Preservation methods

 Lugols’s iodine can be used if the algae of interest are soft bodied forms (i.e., blue-greens and green algae).

 If interested only in diatoms, it may be best to preserve in 70% ethanol.

 Freeze sediment samples if they are to be analyzed for surficial chlorophyll.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 www.urbanrivers.org/web_images/diatoms.gif

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Zooplankton - sampling methods

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s71

Zooplankton

I.

Goals of analysis

1.

Quantitative:

 biomass, absolute abundance

2.

Qualitative

 presence/absence, relative abundance, dominance

II. Sampling

1.

Methods

2.

Frequency iii.

Ancillary information

IV. Preservation methods

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s72

Zooplankton – I. Goals of analysis

Biodiversity

Abundance

Biomass

Community/ecosystem interactions (food webs)

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s73

Zooplankton – I. Goals of analysis, cont.

1.

Qualitative-presence/absence of different species

Relatively simple qualitative techniques; less expensive

2.

Quantitative

Determining absolute and relative abundance of different species; more expensive and time intensive

 Again, as for the algal community, you must assess whether increased effort to obtain more detailed information is worth the time and expense

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s74

Zooplankton – II. sampling methods

 Plankton bottles, traps, tubes, pumps and nets

 Mesh size: balance between catching smaller organisms such as rotifers without reducing net efficiency too much due to algal clogging because of small mesh size

 Vertical net tows are the simplest approach

 Collect vertically-integrated samples from the entire water column or use a closing net that can sample a discrete depth stratum (e.g., 5 to 10 m)

 Discrete depth samplers (e.g. 10m)

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s75

Zooplankton – II. sampling methods, cont.

 Zooplankton distribution varies seasonally, temporally, and spatially in a lake

 Widely variable across the lake, inshore vs. offshore and from day to night (diel “dye-eel” variations)

 Zooplankton can sometimes avoid nets and traps

 Sampling effectiveness may vary for

Crustacea, macrozooplankton, and Rotifera

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s76

Zooplankton – sampling methods

Zooplankton samplers Birge closing net and Wisconsin Net

Simple zoop nets wildco.com

Schindler traps for sampling discrete depths

Aquatic Research Instruments

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s77

Zooplankton – using a net

 Nets should be hauled from just above the lake bottom to the lake surface at a constant speed

(about 1 sec per meter or as a rule of thumb, count 1000, 2000 etc., as you pull the net in hand-over-hand).

 Information required for quantitative analysis includes:

 depth of tow,

 mesh size, diameter of net opening

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s78

Zooplankton – using a net

 Wash plankton concentrate into a jar/bottle with filtered lake water

 Rinse net at least with filtered lake water or by raising and lowering the net

(without introducing new lake water through the mouth)

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s79

Zooplankton – using a net

 Nets can sample a large volume of water

Example

Using a Wisconsin net with a small, 13 cm diameter opening for a 0 to 5 m vertical tow: volume ( m

3

)

 d

2

4

 z

Where d = 0.13 m and z = 5.0 m

 volume ( m

3

)

4

0 .

13

2

 

= 0.66 m 3

= 66 liters

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s80

Zooplankton – III. Sample preservation

• Zooplankton samples can be preserved in 95% ethanol or 5% formaldehyde (formalin).

• Animals preserved in formalin sometimes become distorted, which complicates size measurements.

One solution involves the addition of 40 g/L sucrose to the 5% formaldehyde.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s81

Benthic invertebrates

New Section Photo

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s82

Benthic invertebrates

I. Goals of analysis

1.

Qualitative: presence/absence, relative abundance, dominance, biodiversity

2.

Quantitative: biomass, absolute abundance, biodiversity

II. Sampling

1.

Methods

2.

Frequency

III.

Preservation

IV.

Equipment

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s83

Benthic invertebrates – Qualitative

 Simple, cost-effective

Easily standardized and repeatable

Number of sampling sites should reflect the habitat diversity:

 Substrates; bedrock, cobbles, sand, mud, organic debris, rooted macrophytes

 Groundwater upwellings, lake inflows and outflows

Different wave exposures

Different types of shoreline vegetation

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s84

Benthic invertebrates – Qualitative

 Near shore sampling

Rock pick

Kick and sweep

Activity trap

 Off shore sampling

Grab (Ekman sampler)

Nighttime vertical net tow

St Louis Riverwatch http://lakes.chebucto.org/contract.html

Updated: 12-14-03 U3-m8c-s85 Developed by: E. Ruzycki and R. Axler

Benthic invertebrates - Quantitative

 Quantitative sampling

 Density expressed as individuals per unit area; biomass per unit area

 Sampling methods dependent upon substrate and habitat type

 Use cores of known cross-sectional area (usually

5 to10 cm diameter) for soft sediments

 Emergence traps

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s86

Benthic invertebrates – II. Sampling cores activity traps dip nets sediment dredges

Wildco.com

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s87

Benthic invertebrates – Sampling

 Adult emergence traps

 http://www.usask.ca/biology/skabugs/CandleL.html

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s88

Benthic invertebrates – III. Preservation

 10 % formalin

 Good for general use but remember that formalin is a carcinogen

Fixes (preserves tissues well)

 70 % ethanol

 Good preservative but does not fix tissue

Low toxicity to humans

Major disadvantage is that large volumes are required, which can be difficult to carry in the field.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s89

Aquatic vegetation

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s90

Aquatic vegetation

 Visual assessment

Grabs

Census transects (point and quadrant)

 Aerial surveys

Developed by: E. Ruzycki and R. Axler

AW Research

Updated: 12-14-03 U3-m8c-s91

Aquatic vegetation

 Aquatic plant survey methods vary, depending on the objectives of the study.

Including:

 Surveying for a particular species (e.g., an exotic species)

 Creating a plant community map

 Conducted as part of a general fish and wildlife habitat survey

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s92

Aquatic vegetation

 Survey techniques must account for the three growth types:

 Emergent

Submergent

Floating

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s93

Aquatic vegetation

 Plant survey:

Surface survey – uses a boat and trained observer to survey the littoral zone

Divers can produce similar but more thorough results

Aerial survey – works well for looking for wetland species like purple loosestrife or floating species but doesn’t work well for submerged species.

 Satellite imagery is potentially well-suited for aquatic plant surveys in lakes and wetlands and current research shows promise

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s94

Aquatic vegetation

 Satellite image of

Swan Lake, MN

 UM researchers are determining the effectiveness of this technique

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s95

Aquatic vegetation

Developing a map of the aquatic plant community

 Surface survey

 Quick but not very accurate if the water is turbid

 Sample regularly at different depths

 A weighted plant rake (rake on a rope) can used as a sampling tool

 Plants are marked on a map as they are identified http://www.state.ma.us/dem/programs/lakepond/

Updated: 12-14-03 U3-m8c-s96 Developed by: E. Ruzycki and R. Axler

Aquatic vegetation

 Here is a graph showing the % cover of several aquatic plant species in Lake

Independence (MN).

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s97

Aquatic vegetation

 Here is a presence/ absence map from

Lake Okeechobee.

 This type of map is useful in tracking the spread of exotic species from year to year.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s98

Aquatic vegetation

 Quantifying aquatic plants

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s99

Fish

New section - fish image

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s100

Fish

Image of large fyke net

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s101

Fish

Netting fish - photo

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s102

Fish

Lab investigation photo

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s103

Paleolimnology

Photos of microscopic images

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s104

Paleolimnology

 Paleolimnology is the study of past freshwater, saline, and brackish environments

 In some cases, the history of the water body itself is important, but typically information is used in a wider geographical and ecological context

 These clues can often result in quantitative and qualitative reconstructions of important lake chemistry and biology

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s105

Paleolimnology – diatoms

 Diatoms are powerful indicators of water quality

 There are hundreds of species in all aquatic habitats

They respond quickly and integratively to environmental gradients

 Diatoms are the most used group of algae used in bioassessment

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s106

Paleolimnology – diatoms

 A sediment core is collected

 The fossils, geological, and chemical signals that are preserved in the core are the clues to revealing the ecological history of the lake and the surrounding landscape.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s107

Paleolimnology – diatoms

 The core is essentially sliced into slabs (1 to 4 cm) that represent different historic time periods.

 The sub-samples are dated using 210 Pb and other isotope methods to determine the age and sediment accumulation rates over the past hundreds of years.

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s108

Paleolimnology – diatoms

Graphical representation

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s109

Profiling techniques

New section – image of profiling techniques

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s110

Physical and chemical profiles – Ex. 1

Grindstone Lake

 Temp gradient sharpest from

5-6m

 No really sharp gradients in

DO where it drops to critical levels

 Conclusion: You might sample every meter to ~ 8 –

10 m to characterize the thermocline. Then sample at

2 or even 5 m intervals to save time without losing much information.

Developed by: E. Ruzycki and R. Axler

DO

Updated: 12-14-03

T

U3-m8c-s111

Physical and chemical profiles – Ex. 2

 West Upper Lake

Minnetonka

 Temp gradient sharpest from

10-11m

 DO also sharp from 10 -

11m,dropping to zero.

 Conclusion: sample every meter to ~12m to characterize the thermocline and “oxycline.”

Then sample at 2 m intervals to save time without losing information.

* DO is already zero at 13m and temp is decreasing near linearly

DO

T

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s112

Physical and chemical profiles – Ex. 3

 Sampling interval decisions become more important when you’re on a deep lake (>50 m) where time at a site is important.

Lake Mead is 150 m deep

Lake Washington is > 65 m

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s113

Physical and chemical profiles – Ex. 3

Profile of lake Washington

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s114

Developed by: E. Ruzycki and R. Axler Updated: 12-14-03 U3-m8c-s115

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