Enzymes and How They Work Enzymes • Enzymes are proteins. • They are Biological catalysts (speed up the rate of reactions in living things without themselves being changed). • Without enzymes metabolic reactions would take months to occur. • Since they are not changed the enzymes can be used over and over again. Enzymes • Enzymes speed up reactions by lowering the amount of energy needed to get the reaction to occur; the Activation energy barrier. Enzymes • Enzymes are specific – each enzyme will only catalyse one reaction. • Enzymes are thought to act by a lock and key method or by an induced fit method. • The shape of the enzyme brings the 2 reacting chemicals together at the enzymes active site so that they react together quickly. Lock and Key Hypothesis • The specific action of an enzyme with a single substrate can be explained using a Lock and Key analogy first postulated in 1894 by Emil Fischer. • In this analogy, the lock is the enzyme and the key is the substrate. • Only the correctly sized key (substrate) fits into the key hole (active site) of the lock (enzyme). Lock and Key Hypothesis • Smaller keys, larger keys, or incorrectly positioned teeth on keys (incorrectly shaped or sized substrate molecules) do not fit into the lock (enzyme). • Only the correctly shaped key opens a particular lock. This is illustrated below. The Induced Fit Model • Not all experimental evidence can be adequately explained by using the socalled rigid enzyme model assumed by the lock and key theory. For this reason, a modification called the induced-fit theory has been proposed. The Induced Fit Model • The induced-fit theory assumes that the substrate plays a role in determining the final shape of the enzyme and that the enzyme is partially flexible. • This explains why certain compounds can bind to the enzyme but do not react because the enzyme has been distorted too much. The Induced Fit Model • Other molecules may be too small to induce the proper alignment and therefore cannot react. • Only the proper substrate is capable of inducing the proper alignment of the active site. Induced Fit Model Types of Enzymes • Enzymes which function within the body cells are called Intracellular Enzymes. • Enzymes which function mainly outside the cells e.g. the digestive enzymes are known as Extracellular enzymes. • Some enzymes can become dangerous if they start working at the wrong time or in the wrong place, so the body has organised various methods of containment. Types of Enzymes • Secreting the Enzyme in a harmless form – E.g. Pepsin is secreted as pepsinogen. It does not become active pepsin until it is acted on by stomach acid. • Lysosomes – These are small membrane-bound structures which hold some strong enzymes inside, they are not released until they are needed. Types of Enzymes • Arranged on a Membrane – Some enzymes work in an orderly arrangement (as if moving on a conveyor belt). – E.g. the enzymes involved in photosynthesis and respiration. Factors Affecting Enzymes • pH – Enzymes have a specific ph at which they work best. This is called the optimum pH. – E.g. the enzymes in the mouth work at neutral, those in the stomach work at pH 1 or 2 and those in the intestine work in alkaline conditions. Effect of pH Factors Affecting Enzymes • Temperature – At low temperatures enzyme action is slow. – There is a steady increase in activity as temperature rises, until an optimum temperature is reached. – Above the optimum temperature, the rate of action slows down. – At about 45ºC to 50ºC, the protein becomes denatured (loses its shape). Effect of Temperature Factors Affecting Enzymes • Enzyme Concentration – In general an increase in the rate of enzyme concentration will increase the rate of enzyme action. Factors Affecting Enzymes • Substrate Concentration – In general an increase in substrate concentration will increase the rate of enzyme action. Factors Affecting Enzyme • Enzymes can be Poisoned – E.g. by heavy metal ions such as mercury and lead. – Cytochrome oxidase, an enzyme in the electron transport system of respiration, is poisoned by cyanide. – Cyanide kills because an affected body cannot respire. Factors Affecting Enzyme • Enzymes can act as Poisons – If they get into the wrong part of the body. – Several types of snake, bee, and scorpion venom are harmful – they destroy blood cells or other tissue of other animals. Factors Affecting Enzyme • Co-factors and Co-enzymes – Some enzymes consist solely of protein, others have 2 parts, a protein and another chemical component called a co-factor. – For some enzymes this co-factor is a metal. – The organic co-factors are called coenzymes, and most are vitamins.