DNA & Protein Synthesis Honors Biology History • Before the 1940’s scientists didn’t know what material caused inheritance. • They suspected it was either DNA or proteins. History • A series of experiments proved that DNA was the genetic material responsible for inheritance. Frederick Griffith • Injected mice with different types of pneumonia bacteria • Results showed some type of factor was transferred from killed cells to live cells • Griffith called this transformation Oswald Avery • Repeated Griffith’s idea to find how transformation happens • Result _ DNA was the factor responsible for transformation History • In 1952, Alfred Hershey and Martha Chase did an experiment using a virus that infects E. coli bacteria. • The experiment proved that DNA and not protein is the factor that influences inheritance. History • Erwin Chargaff discovered the base pairing rules and ratios for different species. • Adenine pairs with Thymine • Cytosine pairs with Guanine. History • Rosalind Franklin & Maurice Wilkins had taken the 1st pictures of DNA using X-ray crystallization This proved that DNA had a helical shape. History • The Nobel Prize in Medicine 1962 Francis Harry Compton Crick James Dewey Watson Rosalind Franklin (Died of cancer 1958) Maurice Hugh Frederick Wilkins Watson Crick Wilkins has become a historical footnote and Watson & Crick are remembered as the Fathers of DNA DNA Phosphate Group O O=P-O O Nitrogenous base (A, T, G, C) 5 CH2 O N C4 Sugar C1 (deoxyribose) C3 C2 Nitrogen Bases • 2 types of Nitrogen Bases – Purines PGA • Double ring –G & A – Pyrimidines • Single ring –C & U & T CUT PY DNA - double helix 5 T O A 3 3 P 5 O 5 O C G 1 P 3 2 4 4 2 3 P 1 5 O T 3 P 3 A O P 5 O 5 P DNA • The genetic code is a sequence of DNA nucleotides in the nucleus of cells. DNA • DNA is a doublestranded molecule. • The strands are connected by complementary nucleotide pairs (A-T & C-G) like rungs on a ladder. • The ladder twists to form a double helix. DNA • During S stage in interphase, DNA replicates itself. • DNA replication is a semiconservative process. DNA • Semi-conservative means that you conserve part of the original structure in the new one. • You end up with 2 identical strands of DNA. DNA Replication Step 1: Helicase unzips a molecule of DNA @ the hydrogen bonds between base pairs (breaking the H bonds). Step 2: DNA polymerase joins individual nucleotides to produce a DNA molecule which is a polymer and it also “proofreads” each new DNA strand Step 3: Ligase links the two sections together. DNA • Gene - a segment of DNA that codes for a protein, which in turn codes for a trait (skin tone, eye color, etc.) • A gene is a stretch of DNA. DNA • A mistake in DNA replication is called a mutation. • Many enzymes are involved in finding and repairing mistakes. RNA Phosphate Group O O=P-O O Nitrogenous base (A, U , G, C ) 5 CH2 O N Sugar (ribose) C4 C3 C1 C2 RNA • Function: obtain information from DNA & synthesizes proteins 3 differences from DNA 1. Single strand instead of double strand 2. Ribose instead of deoxyribose 3. Uracil instead of thymine 3 types of RNA 1. Messenger RNA (mRNA)copies information from DNA for protein synthesis Codon- 3 base pairs that code for a single amino acid. codon 3 types of RNA 2. Transfer RNA (tRNA)collects amino acids for protein synthesis Anticodon-a sequence of 3 bases that are complementary base pairs to a codon in the mRNA 3 types of RNA 3. Ribosomal RNA (rRNA)combines with proteins to form ribosomes Amino Acids • Amino acids- the building blocks of protein • At least one kind of tRNA is present for each of the 20 amino acids used in protein synthesis. Transcription - mRNA is made from DNA & goes to the ribosome Translation - Proteins are made from the message on the mRNA Transcription • In order for cells to make proteins, the DNA code must be transcribed (copied) to mRNA. • The mRNA carries the code from the nucleus to the ribosomes. Transcription • RNA polymerase binds to DNA (only to promoters- sections that indicate it to bind on DNA molecule) & separates the DNA strands. • Uses 1 strand as a template from which nucleotides are assembled into a strand of RNA. • Signals (like promoters) tell it to stop when RNA is complete. Translation • At the ribosome, amino acids (AA) are linked together to form specific proteins. • The amino acid sequence is directed by the mRNA molecule. Amino acids ribosome Translation • Begins when mRNA molecule in cytoplasm attaches to ribosome. • It begins at AUG (the start codon) which always binds methionine (amino acid). • The tRNA contains the anticodon whose bases are complementary to a codon on the mRNA strand. • Then another tRNA comes into ribosome and binds the next codon to anticodon. Translation • The ribosome will then bind the two amino acids together, using peptide bonds, and breaks the bond between methionine and its tRNA. • The tRNA floats away from the ribosome allowing ribosome to bind another tRNA. • The ribosome will move along mRNA binding new tRNA molecules and amino acids. Translation • Process continues until ribosome reaches one of the three stop codons: – UAA – UAG – UGA Then it releases the formed polypeptide and the mRNA molecule, completing translation. Make A Protein • DNA sequence ATG TAC AAC AAG GTA ATT • mRNA sequence UAC AUG UUG UUC CAU UAA Make mRNA • mRNA sequence UAC AUG UUG UUC CAU UAA • tRNA sequence AUG UAC AAC AAG GUA AUU Make mRNA • tRNA sequence AUG UAC AAC AAG GUA AUU • mRNA sequence UAC AUG UUG UUC CAU UAA • Amino Acid sequence met lys asp lys val stop Mutations • What causes mutations? – Can occur spontaneously – Can be caused by a mutagen • Mutagen: An agent, such as a chemical, ultraviolet light, or a radioactive element, that can induce or increase the frequency of mutation in an organism. Mutations • Some mutations can: • Have little to no effect • Be beneficial (produce organisms that are better suited to their environments) • Be deleterious (harmful) Mutations • Types of mutations – Point Mutations : involves changes in one or a few nucleotides that occur at a single point in the DNA sequence. • Substitutions- one base changed to another • Insertions- one base is inserted in the DNA sequence • Deletions- one base is removed from the DNA sequence Mutations • Example: Sickle Cell Anemia Sickle Cell Mutation • Mutation in the haemoglobin gene – Oxygen carrying protein found on red blood cells. Life expectancy is 50- 60 years old! Mutations • Types of mutations – Frame Shift Mutations: changes the “reading frame” of the genetic message, so that every codon beyond the point of insertion or deletion is read incorrectly during translation. • Ex.: Crohn’s disease Crohn’s Disease • Bacterial products activate inflammation in digestive system causing – Diarrhea – Constipation – Cramps • Mutation in a gene that produces kininogen protein. • Mutation on Chromosome 16 too! Insertion Deletion Huntington’s disease • A progressive brain disorder that causes uncontrolled movements, emotional problems, and loss of thinking ability. • Mutations in HTT gene causes disease. • HTT-produces huntingtin protein. – CAG trinucleotide repeat Mutations • Types of mutations – Chromosomal Inversions: an entire section of DNA is reversed. – Ex.: Hemophilia a bleeding disorder DNA Repair • A complex system of enzymes, active in the G2 stage of interphase, serves as a back up to repair damaged DNA before it is dispersed into new cells during mitosis. Mutations • Many (most) are neutral and have little or no effect. • Polyploidy- a complete set of chromosomes fails to separate during meiosis, can produce gametes with: – 3N (Triploid) – 4N (Tetraploid) Ex. Polyploid plants are larger and stronger than diplid plants. Gene Regulation • Only a fraction of the genes in a cell are expressed at a given time. • Expressed gene- a gene that is transcribed into RNA. How does cell decided which will be “expressed” and which will be “silent”? Gene Regulation • Certain DNA sequences serve as promoters for DNA-binding proteins to attach and they help to regulate gene expression. • There are “regulatory sites” next to the promoter in which the action of these proteins determines whether a gene is turned on or turned off. Gene Regulation • Most Eukaryotic genes are controlled individually and have regulatory sequences • Why is Gene Regulation Important? Gene Regulation • Regulation of gene expression is important in shaping the way a complex organism develops. • Differentiation- cells don’t just grow and divide during embryonic development they become specialized in structure and function. Gene Regulation • Hox genes- a series of genes that control the differentiation of cells and tissues in the embryo. – A mutation in one of these “master control genes” can completely change the organs that develop in specific parts of the body. – Ex. Fruit fly mutation can replace fly’s antennae with legs growing on its head! Human Genome Project • The Human Genome Project is a collaborative effort of scientists around the world to map the entire gene sequence of humans. • This information will be useful in detection, prevention, and treatment of many genetic diseases. DNA Technologies • DNA technologies allow scientists to identify, study, and modify genes. • Forensic identification is an example of the application of DNA technology. Gene Therapy • Gene therapy is a technique for correcting defective genes responsible for disease development. • Possible cures for: – diabetes – cardiovascular disease – cystic fibrosis – Alzheimer's – Parkinson’s – and many other diseases is possible. Genetic Engineering • • The human manipulation of the genetic material of a cell. Recombinant DNA- Genetically engineered DNA prepared by splicing genes from one species into the cells of a different species. Such DNA becomes part of the host's genetic makeup and is replicated. Genetic Engineering • Genetic engineering techniques are used in a variety of industries, in agriculture, in basic research, and in medicine. This genetically engineered cow resists infections of the udders and can help to increase dairy production. Genetic Engineering • There is great potential for the development of useful products through genetic engineering • EX., human growth hormone, insulin, and pestand disease-resistant fruits and vegetables Seedless watermelons are genetically engineered Genetic Engineering • We can now grow new body parts and soon donating blood will be a thing of the past, but will we go too far? Photo of a mouse growing a "human ear"