Locating the Specimen under the Microscope 1. Place the slide on the stage with the specimen over the beam of light. 2. Always begin at the lowest power (scanning- 4x) with the stage at its highest point. 3. While looking through the microscope, slowly lower the stage using the course adjustment knob until the sample comes into focus. 4. Use the fine adjustment knob to sharpen the image. 5. Turn to the low power (10x) objective and fine focus the image. 6. Turn to the high power (40x) objective and fine focus until the image is clear. Unit 3C Cell Structure and Function 2 Main Categories of Cells 1. Prokaryotic Cells- DO NOT have “membrane bound” organelles and DO NOT have a nucleus to hold the DNA 2. Eukaryotic Cells- contain membrane bound organelles including a nucleus to hold the DNA Euk examples: Prok examples: -Bacteria (Eubacteria, archaebacteria) -Protists (paramecium/ amoeba) -Fungi (mushrooms/ yeast) -Plants -Animals Differences and Similarities Between the Two Cell Types: (+ present, - absent) Cell Characteristics Prokaryotic Cell Outer Cell Membrane + + Cytoplasm-Cell Fluid + + + smaller + larger Nucleus - + Chromosomes (DNA/RNA) + + Membrane Bound Organelles - + Average Size of Cells 1-10 μm 2-1000 μm and larger Time of Evolution 3.5 Billion Years Ago 1.5 Billion Years Ago Ribosome (structures which form proteins) Organisms Exhibiting this type of Cell General Shape of the Cell Bacteria Spherical, rod-shaped, spiral Eukaryotic Cell Protists, plants, fungi, animals Wide variety of shapes depending on function Eukaryotes • Are organisms that have eukaryotic cells (prokaryotes do not) • Examples: animals, plants, fungi, protists • We will mainly be discussing the parts of eukaryotic cells and comparing prokaryotic and eukaryotic cells to each other. Cell Organization • The Nucleus (Euk only) 1. Controls all of the cell’s activities because it… Contains and protects the DNA Surrounded by the nuclear envelope double lipid bilayer with pores that regulates what enters/exits the nucleus Contains the nucleolus area of the nucleus that makes ribosomes 2. 3. 4. Cell Organization (continued) • Cytoplasm- the portion of Shade in the region the cell outside of the showing the cytoplasm nucleus • Found in both prok and euk • Contains an aqueous Shade in the solution called cytosol region the containing solutes needed showing cytosol for metabolic reactions • Contains the organelles (in euk) Cell Organization (continued) • Organelles- specialized structures inside the cell (“Little Organs”) • Mostly found in the cytoplasm • If membrane bound (surrounded by a membrane)- only found in euk • Summarize cell organization at the bottom of pg. 2 Organelles and Cell Structures • The following slides discuss the organelles of a cell, they fall into the following categories: 1. Cellular boundaries 2. Organelles that capture and release energy 3. Organelles that store, clean up, and support 4. Organelles that build proteins Cellular Boundaries Boundaries keep certain things inside and certain things outside of the cell. • Cell Walls • Cell Membranes A. Cell Walls • Support, shape, and protect the cell • Lie outside the cell membrane • Have openings allowing small molecules in and out (semipermeable, not selectively permeable). • Found in most prokaryotes, many eukaryotes (protists, fungi, and plant cells), but NOT in animal cells – Why not? – We need to move/be flexible Cell Wall Composition • In bacteria- contains various carbohydrates • In protists- carbs and silica (SiO2) • In fungi- chitin (a type of carb) • In Plants- mostly cellulose (polysaccharide made of glucose monomers) B. Cell (or Plasma) Membranes • • • • Found surrounding all cells (prok or euk) Made of a lipid bilayer Protects and supports the cell Regulates what comes in and out of the cell- selectively permeable The Fluid Mosaic Model • Flexible and contains many transport proteins that help move materials in and out and help cells communicate. • Carbs on the outer surface help with communication and identification of the cell. Carbohydrates attached to proteins Proteins in Membrane Summarize cellular boundaries at the bottom of pg. 4. Organelles that Capture and Release Energy Are membrane bound and thus found in eukaryotic cells only • Chloroplasts- found in plant cells; are the location of photosynthesis • Mitochondria- found in both plant and animal cells; location of energy production (ATP) A. Chloroplasts and Photosynthesis • Contain a green colored pigment called chlorophyll which captures light energy to power photosynthesis • Have two membranes (inner and outer). • Contain a fluid called stroma, stacks called grana of folded structures called thylakoids surrounded by thylakoid membranes. Photosynthesis: 6CO2 + 6H2O→ C6H12O6 + 6O2 Label the chloroplast • If the pigment chlorophyll causes the green color in plants, do all plant parts contain chlorophyll? Support your answer. • Some prokaryotic bacteria are photosynthetic. Do They contain chloroplasts? B. Mitochondria and Cellular Respiration • Contain its own unique DNA, proteins, and ribosomes; can self replicate • Contains an outer membrane, and a fluid called matrix inside a highly folded inner membrane. • This creates folds called cristae for the reactions of cellular respiration. Cellular Respiration: 6O2 + C6H12O6 → 6CO2 + 6H2O + ATP Label the Mitochondria Mitochondria and Cellular Respiration • Which do you think would contain more mitochondria, a heart muscle cell or a skin cell? • Why? • Summarize energy organelles at the bottom of pg. 5 Organelles that Store, Clean up, and Support • Storage: vacuoles (store material) and vesicles (move materials around the cell) – Vacuoles form by the combining of many vesicles • Clean up: lysosomes- contain enzymes to digest materials • Support: the cytoskeleton- meshwork that allows for movement of the cell and materials throughout the cell – Contains the centrioles (help the cell divide) A. Vacuoles “Storage” • Membrane bound organelles found in eukaryotic cells • In Plant cells- typically have one large central vacuole to store water, nutrients, wastes, and enzymes. – Helps maintain turgor pressurethe pressure from inside the full vacuole that pushes the cell membrane against the cell wall and helps the plant cell stay rigid Vacuoles “Storage” (cont.) • In Animal cells- have varying numbers of small vacuoles that function to store large molecules like: – food brought in by a vesicle during endocytosis – Molecules waiting to be released by exocytosis Vacuoles “Storage” (cont.) • In Unicellular aquatic organisms- there are specialized vacuoles called contractile vacuoles which function to pump excess water from the cell’s cytoplasm • Think back to the unit on cell transport – Why are contractile vacuoles necessary in unicellular aquatic organisms? – Without them, cells would swell and explode due to water rushing in from the hypotonic environment of the pond B. Lysosomes “Clean up” • Found in eukaryotes, though mainly in animal cells (rare in plant cells) • Membrane bound sacks that are the site of hydrolysis (digestion) • Have an acidic pH and are filled with digestive enzymes • Produced by the golgi apparatus Lysosomes “Clean up” • Why is it important for the digestive enzymes to be bound by the lysosome, rather than being in the cytoplasm? – If the enzymes were free in the cytoplasm then they could break down other molecules and even organelles that need to stay intact. • Summarize storage and clean up at the bottom of pg. 6 C. Cytoskeleton “Support” • Just like your body depends on your skeleton (bones) to keep your shape, so do cells. • Not membrane bound so also in prokaryotes • Consist of long networks of protein strands called microfilaments and microtubules. -Thicker strandsmicrotubules -Thinner strandsmicrofilaments The Cytoskeleton “Support”(continued) microfilaments – provide a framework and The amazing help move the cell marching proteins! - made of the protein actin Intermediate filaments – help anchor cells in place using a variety of proteins microtubules – Act as tracks for organelles to travel on as they move throughout the cell - help in cell reproduction and division by forming centrioles (not found in prok or plant cells) - made of proteins called tubulins More on Microtubules • May extend outside of the cell to form cilia (tiny hairs) or flagella (long tail-like hairs)help the cell move Ex: sperm cell- one flagella Other microorganismsone or more flagella Cilia Ex: Paramecium Flagella • Summarize the cytoskeleton at the bottom of pg. 7 Organelles that build Proteins • Ribosomes • Rough Endoplasmic Reticulum (ER) • Golgi Apparatus Ribosomes make proteins and insert them into the Rough ER Rough ER tags and modifies the proteins and sends them to the Golgi in vesicles The Golgi packages the proteins and sends them off in vesicles to where they are needed Ribosomes NOT membrane bound- so also found in prokaryotes Produced by the nucleolus (which is where?) There are two types of Ribosomes Free Ribosomes – move around in the cytoplasm ER Ribosomes – are attached to the rough endoplasmic reticulum Chloroplasts and mitochondria have their own ribosomes! (remember endosymbiosis?) Ribosome Structure • Two parts (subunits) • One large subunit and one small subunit that fit together • Both made of RNA bound with proteins Endoplasmic Reticulum (ER) • Network of membrane bound tubes and sacks. Constantly forming and breaking down. Endoplasmic Reticulum (ER) There are two types of ER 1. Rough ER- has ribosomes on its surface - Proteins are made at the ribosomes and inserted into the rough ER. The rough ER tags/modifies the proteins; telling the cell where to send them ER (continued) 2. Smooth ER- no ribosomes on its surface - NOT involved in the synthesis of proteins - Helps make lipids - Site of detoxification of drugs like alcohol and sedatives - cells in people who use these drugs from large amounts of smooth ER. Golgi Apparatus • Series of sack-like membranes, drawn like a stack of pita bread • Found between the rough ER and cell membrane • Modifies, sorts, and packages proteins coming from the rough ER • Sends the finished proteins to their destination by vesicles which bubble off of the main stacks. (Proteins may be sent either elsewhere in the cell or to its surface to leave the cell) • Lysosomes are formed from golgi vesicles – The “FedEx” of the cell • Summarize protein synthesis at the bottom of pg. 9 Differences between Plant and Animal Cells Plant cells share all the common features of animal cells, but also contain some additional organelles. • chloroplasts to convert sunlight into food chloroplast vacuole • Every plant cell is surrounded by a cell wall, and typically contains large central vacuole. • Plant cells do NOT have centrioles cell wall Plant cells vs. Animal cells Label the following Eukaryotic Cells A B C_______________________ D E AB AC AD AE BC BD BE CE Which cell – the one on the right or the left – is the Animal cell?_________ Plant cell?___________ Cells can function individually and work together in order for the organism to function as a whole Homeostasis in Unicellular Organisms • Unicellular organism- an organism made of just 1 cell. – Can perform all necessary functions for life – Must maintain homeostasis • By growing, responding to their environment, transforming energy, and reproducing. Homeostasis in Multicellular Life • Multicellular organisms are made of many cells that work together • Also must maintain homeostasis – To do this, cells become specialized for certain tasks and communicate with each other. Cell Specialization • Different cells take on different roles • The process by which cells specialize is called cell differentiation Cell Specialization (cont.) – Example: human tracheal cells- millions of cilia sweep out debris that you breathe in. Filled with mitochondria because need constant supply of ATP to do this day and night! – What other cells are specialized in the human body? Cell Specialization (cont.) • Pick any two cell types from the diagram– compare and contrast their specialized structure, and relate this to the cells’ function in the body. Levels of Organization • Cells that work together form tissues • Tissues that work together form organs • Organs that work together form organ systems • Organ systems work together to make a fully functioning organism • Example 1: Levels of Organization • Example 2: Levels of Organization (continued) Cellular Communication • How do cells interact to form tissues and organs? • Cells of the same tissue are connected by an extracellular matrix (ECM) and… • communicate by sending chemical signals to one another. Extracellular Matrix (ECM) • The ECM is a meshwork of proteins and polysaccharides located between cells that plays a role in 1) connecting cells into tissues through cell junctions and 2) sending chemical signals between cells using receptor proteins. 1) Cell Junctions • Cell Junctions are connections between two cells, or between a cell and the ECM – Hold cells together – Allow signaling molecules to pass between cells – Anchor the cell to the ECM Many types of cell junctions ECM 2) Receptor Proteins • To respond to a signal, the cell must have a receptor for that signal • These receptors are proteins and may be in the cell membrane or in the cytoplasm • When bound by a signaling molecule, the receptor will cause changes within the cell Cell Signaling Is Complex!!