Supporting information A Family of Single-Isomer, Dicationic Cyclodextrin Chiral Selectors for Capillary Electrophoresis: Mono-6A-ammonium-6C-butylimidazolium-β-cyclodextrin chlorides Yun Dai, Shuye Wang, Jie Zhou, Jian Tang*, Weihua Tang* Key Laboratory of Soft Chemistry and Functional Materials, Nanjing University of Science and Technology, Nanjing 210094, P.R. China Email: whtang@mail.njust.edu.cn Content 1. Materials, Characterization and Methods……………………...………….…..S2 2. Experimental Procedures……………………………………………………..…S2 3. 1H and 13C NMR spectra ....…………………………………………….…….....S6 4. CE operating procedure………………………………………………...………S10 S1 1. Materials, Characterization and CE Methods Materials. All chemical reagents and solvents were purchased from Sigma (St. Louis, MO, USA). Pyridine, ethanol and N,N-dimethylformamide (DMF) were freshly distilled over CaH 2 prior to use. All racemic analytes (Structure in Figure S1) were purchased either from Aldrich (Steinheim, Germany) or from Sigma (St. Louis, MO, USA). Characterization. All synthetic intermediate compounds were routinely checked by infrared (IR) spectra (Shimadzu FT-IR 8101 M, Shimadzu Corporation, Kyoto, Japan). 1H and 13 C nuclear magnetic resonance (NMR) spectra were obtained on a Bruker AVANCE 500 (Bruker Bio-Spin Corporation, Europe) working at 500 and 125 MHz, respectively; δ in ppm relative to SiMe4 as internal standard; coupling constants J in Hz; 13CNMR spectra were fully decoupled. The mass spectra of CD-cation were collected in positive modes in a single run from a Finniga/AM TSQ Quantum (Thermal, USA). CE methods. Beckman P/ACE MDQ CE unit (Fullerton, CA, USA) was used for all CE separations. 50 μm ID, 375 μm OD fused silica capillary was used with a total length of 59.2 cm (49 cm to the detector). Detection of analytes was carried out simultaneously at 214 nm, 254 nm and 280nm by using variable-wavelength PDA (Photodiode Array, 190-300 nm) detector. The electrosmotic flow (EOF) was measured with methanol as neutral marker. Samples were introduced hydrodynamically into the capillary at 0.5 psi for 5 s. All experiments were performed under normal polarity with 15 kV applied voltage. 2. Experimental Procedures Synthesis of 6A-azido-6C-mesitylenesulfonyl-β-cyclodextrin (Mess-N3-CD, 2) Starting from 6A-azido-β-cyclodextrin (N3-CD) 1 [1], disubstituted CDs at primary ring were prepared via nucleophilic substitution of 6-hydroxy group with 2-mesitylenesulfonyl chloride. A typical synthesis is described as follows. Towards a vigorously stirred solution of 1 (5 g, 4.3 mmol) in freshly distilled pyridine (25 mL) was added with and 2-mesitylenesulfonyl chloride (4.3 g, 19.4 mmol). The reaction mixture was stirred at 25oC for 9 h. The crude product was obtained by precipitating the reaction mixture out of vigorously stirred acetone (200 mL). The precipitate was S2 collected by filtration and washed with acetone to give a mixture of three regio-isomers, 6A-azido-6X-mesitylene-sulfonyl--cyclodextrin (X=B, C or D) as white solid (5.32 g, yield 82%). The mixture was further subjected to a reversed phase column chromatography to afford the regio-isomer (Figure S1), 6A-azido-6C-mesitylene-sulfonyl- -cyclodextrin (Mess-N3-CD) 2 with a yield of 42% [2]. Most characteristic for Mess-N3-CD in 13 C NMR is: 101.68 (C1), 81.53 (C4), strong peak centered at 71.82 (C2, C3, C5), and 59.67 (C6 adjacent to hydroxyl), which agrees well with the literature [3]. Figure S1. Reversed phase column chromatography of Mess-N3-CD 2. A linear gradient elution of ethanol was applied according to ref. [2]. Characterization data for 2: decompose temperature (dp): 203.5oC; IR(cm-1, KBr): 3387 (O-H str), 2928 (C-H str), 2104 (N≡N str), 1644, 1637 (C=C str), 1157(S=O str), 1080,1030 (C-O-C str); 1HNMR (500 MHz, DMSO-d6) δ: 7.11 (m, 2H, aromatic), 5.83-5.70 (m, 14H, OH-2 and OH-3), 4.88-4.82 (m, 7H, H-1), 4.51-4.45 (m, 5H, OH-6), 4.21 (br, 1H, H-3’CD), 4.09 (s, 1H, H-5’CD), 3.64-3.55 (m, 26H, H-5CD, H-3CD and H-6CD), 3.36-3.26 (m, 14H, H-2CD and H-4CD), 2.29 (s, 6H, Ar-o-CH3), 2.17 (s, 3H, Ar-p-CH3); 13 CNMR (125 MHz, DMSO-d6) δ: 142.99 (Cipso), 138.92 (Cortho), 131.25 (Cpara), 129.53 (Cmeta), 101.68 (C1), 81.53 (C4), 71.92-70.27 (C2,C3,C5), 68.79 (C5’), 59.67 (C6), 59.29(C6’), 21.75 (CH3-ortho), 20.24 (CH3-para); Anal. Calcd. for C44H79N3O36S: C, 42.00; H, 6.33. Found: C, 41.84; H, 6.72; ESI-MS (m/z): 1342.42 (calcd.), 1342.26 (found) for [M+]. S3 Synthesis of butylimidazole, 3 Towards a degassed and N2-filled flask was subsequently added with imidazole (4 g, 58.8 mmol), sodium ethoxide (4.4 g, 64.6 mmol) and anhydrous ethanol (20 mL). Afterwards, excessive 1-bromobutane (8.85 g, 64.6 mmol) was added dropwise. The reaction mixture was refluxed at 50oC for 4 h before cooling down to room temperature. The insoluble solid was filtered off and washed with dichloromethane. The collected filtrate was concentrated and further distilled under reduced pressure to afford the title product as yellowish liquid (5.84 g, 80% yield). 1HNMR (500 MHz, CDCl3) δ: 7.38 (s, 1H, CH-2im), 7.01 (s, 1H, CH-4im), 6.83 (s, 1H, CH-5im), 3.85 (t, 2H, CH2-im), 1.64-1.70 (m, 2H, CH2), 1.22-1.26 (m, 2H, CH2), 0.86 (t, 3H, CH3). Synthesis of 6A-azido-6C-butylimidazolium-β-cyclodextrin mesitylene sulfonate, 4 Towards a degassed and N2-filled two-necked, round-bottomed flask, was added with mess-N3-CD 2 (3.0 mmol, 4.02 g), 1-butylimidazole 3 (9.0 mmol, 1.12 g) and freshly distilled N,N-dimethylformamide (DMF, 15 mL). The reaction mixture was stirred at 90oC for 48 h under N2 atmosphere. Cooling down to room temperature, the reaction solution was precipitated using acetone (100 mL). The precipitate was collected by filtration and washed with acetone (50 mL×2) before dry in vacco at 60oC under vacuum overnight. The crude product was recrystallized from water to obtain the title product 4 (3.34 g, 76% yield) as a white solid. dp: 221.8oC; IR (cm-1, KBr): 3396(O-H str), 2928 (C-H str), 2106 (N≡N str), 1644, 1636(C=C str), 1155 (S=O str), 1084, 1030 (C-O-C str); 1HNMR (500 MHz, DMSO-d6) δ: 9.03 (s, 1H, CH-2im), 8.32 (s, 1H, CH-4im), 8.13 (m, 1H, CH-5im), 7.54 (m, 2H, aromatic), 5.60-5.92 (m,14H, OH-2 and OH-3), 4.86 (s, 1H, H-1), 4.84 (s, 6H, H-1), 4.27-4.63 (m, 5H, OH-6), 4.11 (t, 2H, CH2-im), 3.90 (m, 1H, H-3’CD), 3.83 (m, 1H, H-5’CD), 3.49-3.74 (m, 26H, H-5CD, H-3CD and H-6CD), 3.20-3.48 (m, 14H, H-2CD and H-4CD), 2.32(s, 6H, Ar-o-CH3), 2.16 (s, 3H, Ar-p-CH3), 1.71-1.78 (m, 2H, CH2), 1.20-1.25 (m, 2H, CH2), 0.88 (t, 3H, CH3); 13 C NMR (125 MHz, D2O): 149.10 (Cipso), 144.53 (Cortho), 143.03 (Cpara), 135.53 (Cmeta), 132.32 (=C2im), 128.41 (=C4im), 126.24 (=C5im), 102.39 (C1), 83.41 (C4), 82.30 (C4), 73.52-72.47 (C2,C3,C5), 70.67 (C5’), 60.41 (C6), 51.54 (CH2-im), 45.66 (CH2-im), 36.28 (CH2-im),31.27 (CH3-im), 24.13 (CH3-ortho), 19.94 (CH3-para); ESI-MS (m/z): 1267.25 (calcd.), 1268.69 (found) for [M+]. S4 Synthesis of 6A-amino-6C-butylimidazolium-β-cyclodextrin mesitylene sulfonate, 5 Towards a 50 mL two-necked round-bottomed flask was added with 6A-azido-6C-alkylimidazolium-β-cyclodextrin mesitylene sulfonate 4 (2.0 mmol, 2.93 g), triphenylphosphine (2.2 mmol, 0.52 g) and DMF (10 mL). The reaction was stirred to proceed at room temperature for 2 h before the addition of deionized water (1.0 mL). The reaction mixture was then heated at 90oC for 3 h. Cooling down the reaction mixture to room temperature, the reaction solution was precipitated out with acetone (60 mL). Collected by filtration and washed with acetone (50 mL × 2), the crude product was dried in vacco at 60oC overnight. After recrystallizaztion from water, the title product 5 (2.19 g, 76% yield) was obtained as white solid. dp: 214.7oC; IR(cm-1, KBr): 3383 (O-H str), 2928 (C-H str), 1667, 1658(C=C str), 1155 (S=O str), 1078, 1032 (C-O-C str); 1HNMR (500 MHz, DMSO-d6) δ: 9.03 (s, 1H, CH-2im), 8.62 (s, 1H, CH-4im), 8.33 (m, 1H, CH-5im), 7.85 (m, 2H, aromatic), 5.52-6.10 (m,14H, OH-2 and OH-3), 4.96 (s, 1H, H-1), 4.84 (s, 6H, H-1), 4.27 -4.63 (m, 5H, OH-6), 3.91 (t, 2H, CH2-im), 3.82 (m, 1H, H-3’CD), 3.53-3.79 (m, 27H, H-5CD, H-3CD and H-6CD), 3.18-3.53 (m, 14H, H-2CD and H-4CD), 3.05 (m, 1H, H-4’CD), 2.88(s, 6H, Ar-o-CH3), 2.73 (s, 3H, Ar-p-CH3), 1.59 (m, 2H, CH2), 1.22 (m, 2H, CH2), 0.85 (t, 3H, CH3). CNMR (125 MHz, DMSO-d6) δ: 145.95 (Cipso), 139.29 (Cortho), 137.83 (Cpara), 13 133.48 (Cmeta), 131.98 (=C2im), 129.20 (=C4im), 128.44 (=C5im), 102.42 (C1), 83.38 (C4’), 82.02 (C4), 73.50-72.55 (C2,C3,C5), 71.29 (C5’), 60.43 (C6), 36.27 (CH2-im), 35.02 (CH2-im) 31.30 (CH2-im), 29.57 (CH3-im), 21.83 (CH3-ortho), 19.30. (CH3-para); ESI-MS (m/z): 1241.25 (calcd.), 1241.47 (found) for [M+]. Synthesis of 6A-amino-6C-butylimidazolium-β-cyclodextrin chloride, 6 6A-Amino-6C-alkylimidazolium-β-cyclodextrin mesitylene sulfonate 5 (1.4 mmol, 2.02 g) was dissolved in deionized water (50 mL). Amberlite IRA-900 ion-exchange resin was packed into an addition funnel (100 mL) to half height. The above-mentioned solution 5 was transferred into the addition funnel and left to stand for 5 h. The eluent was then collected. Water was distilled off under reduced pressure to obtain the crude compound. After drying at 60oC in vacco overnight, the title compound 6 (1.49 g, 75% yield) was obtained as a white solid. Synthesis of 6A-ammonium-6C-butylimidazolium-β-cyclodextrin chloride, 7 S5 6A-Amino-6C-butylimidazolium-β-cyclodextrin chloride 6 (1.0 mmol, 1.31 g) was dissolved into deionized water (30 mL). Towards the above vigorously stirred solution was added dropwise with freshly prepared dilute hydrochloric acid solution (0.1 M, 15 mL) over 1 h. The solution was concentrated to ~10 mL and precipitated from acetone (100 mL). The solid was obtained by filtration and washed with acetone (50 mL × 2). After drying in vacco at 60oC overnight, the final product 7 (1.18 g, 88% yield) was obtained by further recrystallization from deionized water as awhite solid. IR (cm-1, KBr): 3387(O-H str), 2928 (C-H str), 1084, 1030 (C-O-C str); 1HNMR (500 MHz, DMSO-d6) δ: 8.93 (s, 1H, CH-2im), 8.22 (s, 1H, CH-4im), 8.13 (m, 1H, CH-5im), 5.50-6.14 (m,14H, OH-2 and OH-3), 4.96 (s, 1H, H-1), 4.88 (s, 6H, H-1), 4.53-4.27 (m, 5H, OH-6), 4.13 (m, 2H, NH2), 3.90 (t, 2H, CH2-im), 3.84 (m, 1H, H-3’CD), 3.50-3.72 (m, 27H, H-5CD, H-3CD and H-6CD), 3.28-3.50 (m, 14H, H-2CD and H-4CD), 3.15 (m, 1H, H-4’CD), 1.58 (m, 2H, CH2), 1.32 (m, 2H, CH2), 0.91 (t, 3H, CH3). CNMR (125 MHz, DMSO-d6) δ: 132.81 (=C2im), 130.52 (=C4im), 128.45 (=C5im), 13 102.92 (C1), 83.98 (C4), 73.22 (C2), 72.57-71.92 (C3, C5), 68.12 (C5’), 60.54 (C6), 44.67 (CH2-im), 30.42 (CH2-im), 20.71 (CH2-im), 19.46 (CH2-im); ESI-MS (m/z): 1242.25 (calcd.), 1242.59 (found) for [M+]. 3. 1H and 13C NMR spectra of intermediate and final compounds Figure S2. 1H NMR spectrum of 6A-azido-6C-mesitylenesulfonyl-β-cyclodextrin (Mess-N3-CD, 2). S6 Figure S3. 1H NMR and 13 CNMR spectra of 6A-azido-6C-butylimidazoliumβ-cyclodextrin mesitylene sulfonate 4. S7 Figure S4. 1H NMR and 13 CNMR spectra of 6A-amino-6C-butylimidazoliumβ-cyclodextrin mesitylene sulfonate 5. S8 Figure S5. 1H NMR and 13 CNMR spectra of 6A-ammonium-6C-butylimidazoliumβ-cyclodextrin chlorides 7. S9 4. CE operating procedure Background electrolytes (BGEs) were prepared with 50 mM acetate buffer (pH 5.5, 6.0) and sodium phosphate buffer (pH 6.5, 7.0). The stock racemates (structure shown in Figure S1) solution (50 μg ml-1) was prepared with methanol/water (50:50, v/v) mixture solution, filtered with 0.45 μm syringe type Millipore membrane and sonicated prior to use. Acetate buffer was prepared by dissolving a desirable amount of sodium acetate in water, with its pH (5.5, 6.0) adjusted with acetic acid while sodium phosphate buffer was prepared with sodium phosphate and sodium hydroxide to get the required pH 6.5 and 7.0. The effect of buffer pH on chiral separation of different types enantiomers was assessed by gradually increasing the pH from 5.5 to 7.0. BAMIMCD demonstrated outstanding enantioseparation towards both Dns-Aca and acidic racemates at concentration low as 1 mM. 5. pI value of dansyl α-aminocarproic acid S10 Figure S6. The charge vs. pH curve for Dns-α-aminocaproic acid, with pI value calculated by SPARC [4]. References (1) (2) (3) (4) W. H. Tang, S. C. Ng, Nat. Protocols 3 (2008) 691. K. Fujita, A. Matsunaga, T. Imoto, Tetrahedron Lett. 25 (1984) 5533. L. Tabushi, Y. Kuroda, K. Yokota, L. C. Yuan, J. Am. Chem. Soc. 103 (1981) 711. S. H. Hilal, Y. El-Shabrawy, L. A. Carreira, S.W. Karickhoff, S. S. Toubar, M., Rizk, Talanta 43 (1996) 607. S11