Chapter 11: Mendelian Patterns of Inheritance (Outline) Blending Inheritance Monohybrid Cross Law of Segregation Modern Genetics Genotype vs. Phenotype Punnett Square Dihybrid Cross Law of Independent Assortment Extending the Range of Mendelian Genetics Multiple Allelic Traits Incomplete Dominance & Incomplete Penetrance Polygenic Inheritance Gregor Mendel Austrian monk Studied science and mathematics at the University of Vienna Conducted breeding experiments with the garden pea Pisum sativum Applied mathematics to biology; gathered statistical data from his breeding experiments Formulated fundamental laws of heredity in early 1860s Had no knowledge of cells or chromosomes Did not have a microscope Blending Inheritance Theories of inheritance in Mendel’s time: Based on blending Parents of contrasting appearance produce offspring of intermediate appearance Example – red and white flowered plants will produce intermediate pink flowers Caused a major problem with Darwin's theory of evolution by natural selection Mendel’s findings were in contrast with this He formulated the particulate theory of inheritance Inheritance involves reshuffling of genes from generation to generation Mendel’s Experimental Procedure Conducted breeding experiments with the garden pea Pisum sativum (22 vaireites), why? Easy to cultivate Short generation time Although peas self-pollinate (true breeding), they could be cross-pollinated by hand Mendel isolated true breeding strains of peas with distinctive traits Mendel looked at only one trait at a time Example: Seed shape, flower color, height, etc. Fruit and Flower of the Garden Pea Garden Pea Traits Studied by Mendel Monohybrid Cross Mendel's first experiments were monohybrid crosses Monohybrid crosses have two parents that are true-breeding for contrasting forms of a trait One form of the trait disappears in F1 generation, only to show up in F2 generation A 3:1 ratio among the F2 generation was possible if the F1 parents contained 2 separate copies of each hereditary factor These factors separate during gamete formation, each containing only one copy Mendel’s Monohybrid Crosses: An Example Mendel’s Monohybrid Crosses Law of Segregation The law of segregation states that: Each individual has a two factors (alleles) for each trait The factors (alleles) segregate (separate) during the formation of gametes Each gamete contains only one factor (allele) from each pair of factors Fertilization gives each new individual two factors (alleles) for each trait Modern Genetics View Each trait in a pea plant is controlled by two alleles (i.e. alternate forms of a gene) Dominant allele (capital letter) masks the expression of the recessive allele (lower-case) Alleles occur on a homologous pair of chromosomes at a particular gene locus Homozygous = identical alleles Heterozygous = different alleles During meiosis I, bivalents separate; thus explains the law of segregation and why one allele for each trait is found in a gamete Homologous Chromosomes Genotype vs. Phenotype Genotype Refers to the two alleles an individual has for a specific trait If identical, genotype is homozygous If different, genotype is heterozygous Phenotype Refers to the physical appearance of the individual Example: TT or Tt (tall plant), tt (short plant) One-Trait Genetics Problems Basic steps to solving genetics problems Identify which allele is dominant & decide on appropriate allele key (Use capital letters for dominant traits, lower case for recessive traits) Determine the genotype of both parents & the various types of gametes for both parents Cross the male and female gametes Example: Unattached earlobes (E) are dominant over attached earlobes (e) Laws of Probability Mendel's laws are basically real-life applications of the rules of probability that apply to a coin toss Rule of multiplication: segregation of the alleles into gametes is like a coin toss (heads or tails = equal probability) In the cross Ee X Ee, the child will inherit an allele from each parent The probability of receiving these genotypes 1/2 1/2 1/2 1/2 x x x x 1/2 1/2 1/2 1/2 = = = = 1/4 1/4 1/4 1/4 chance chance chance chance of of of of having having having having child child child child with with with with EE Ee eE ee The chance of a child with unattached earlobes is ¾, or 75% The chance of a child with unattached earlobes is 1/4, or 25% Punnett Square Table listing all possible genotypes resulting from a cross Introduced by geneticist R.C. Punnett as a simple way to show probability of a genetic cross All possible sperm genotypes are lined up on one side All possible egg genotypes are lined up on the other side Every possible zygote genotypes are placed within the squares In humans, phenotypic ratio is used to estimate the chances any child has for a particular characteristic Punnett Square Showing Earlobe Inheritance Patterns One-Trait Genetics Problems Set up a Punnett square using the possible gametes of the P generation Complete the Punnett square and use this information to answer the original question!! Always write ratios in the following format Genotypic ratio homozygous dominant: heterozygous: homozygous recessive Phenotypic ratio dominant phenotype: recessive phenotype You may express probabilities in a percent (%) or fraction Monohybrid Testcross Individuals with recessive phenotype always have the homozygous recessive genotype However, individuals with dominant phenotype have indeterminate genotype May be homozygous dominant, or Heterozygous Test cross determines genotype of individual having dominant phenotype Mendel crossed tall plant with true-breeding short plant If heterozygous, the phenotypic ratio is 1:1 If homozygous, all offspring are tall One-Trait Testcross Heterozygous or Homozygous Monohybrid Cross Example Problems In pea plants, green pea color is dominant over yellow pea color. Two plants that have heterozygous green peas are crossed. What are the genotypic & phenotypic ratios of the F1 generation offspring? In mice, white color is dominant over black color. A white mouse is crossed with a black mouse and 24 offspring are produced, 18 of which are white and 6 black. What were the genotypes of each of the parent mice? The ability to roll the tongue is dominant over the inability to do so in humans. A woman who can roll her tongue marries a man who cannot. Their first child has his father's phenotype. What are the genotypes of the mother, father and child? Mendel's Law of Independent Assortment Mendel also performed testcrosses between plants that differed in two traits (dihybrid) For example, a tall plant (TT) having green pods (GG) color was cross-pollinated with a short plant (tt) having yellow pods (gg) The progeny from the cross (the F1 generation) were allowed to self-pollinate to generate the F2 generation If the dominant factors (T and G) segregate during meiosis together, progeny will all be tall with green pods If the factors segregate separately, then four possible phenotype could result Two-Trait Testcross Two-Trait Inheritance These results demonstrated that the two factors segregated independently Two-Trait Inheritance Based upon these results, Mendel formulated the law of independent assortment The pair of factors for one trait segregate (assorts) independently of the factors for other traits All possible combinations of factors can occur in the gametes Example: Eye & hair color Two-Trait Genetics Problems Because the fruit fly Drosophila melanogaster has a variety of heritable mutations, this insect has been used extensively in genetic research Allele that occurs most frequently in population (normal) is known as wild type Two mutations displayed by this fly are wing length and body color Wild type (normal) flies have long wings (L) and gray bodies (G) Mutant flies can have short wings (l) and black bodies (g) Laws of Probability If two flies are heterozygous for both traits, what are the probable results? Each trait is inherited separately from any other, thus it is possible to use the rule of multiplication The F2 results for two separate monohybrid crosses are Long wings = ¾, short wings = ¼ Gray body = ¾, black body = ¼ The probability of receiving these genotypes Chance Chance Chance Chance of of of of long wings & gray body = ¾ x ¾ = 9/16 long wings & black body = ¾ x ¼ = 3/16 short wings & gray body = ¼ x ¾ = 3/16 short wings & black body = ¼ x ¼ = 1/16 The phenotypic ratio is 9:3:3:1 Two-Trait Testcross Fruit flies that have long wings and gray bodies could be heterozygous or homozygous for each trait When the genotype is in doubt, it can be written as L__G__ to indicate that there is one dominant allele but the other is unknown A two-trait testcross can be used to determine genotype of an L__G__ organism Two-Trait Testcross In a two-trait testcross, a dominant L__G__ fly is crossed with a true-breeding recessive fly of known genotype (llgg) A heterozygous dominant fly would produce four possible gametes LG Lg lG lg The homozygous recessive fly can only form gametes containing lg Two-Trait Testcross Since the homozygous parent only contributes lg, the other parent determines the phenotype of the offspring Since the heterozygous parent would provide four gamete types, the offspring should be present in a 1:1:1:1 ratio Two-Trait Testcross But if the parent is homozygous dominant (LLGG), then the gametes would only contain LG In this case, the testcross would produce offspring that had only the dominant phenotypes What would be the result if the test individual was homozygous dominant for one trait but heterozygous for the other? Extending the Range of Mendelian Genetics Mendel’s study of inheritance dealt with simple, independently-segregating traits There are other complex patterns of inheritance, such as Multiple Alleles Incomplete Dominance Polygenic Inheritence Multiple Allelic Traits Some traits are controlled by multiple alleles The gene exists in several allelic forms For example, ABO blood types The alleles: IA = A antigen on red blood cells IB = B antigen on red blood cells i = Neither A nor B antigens on red blood cells Each person has only two of these possible three alleles Multiple Allelic Traits The combination of these alleles produce a person’s blood type IA and IB alleles are dominant over i IAi and IAIA genotypes produce type A blood IBi and IBIB genotypes produce type B blood The ii genotype produces type O blood IA and IB alleles are codominant, meaning that neither is dominant over the other The IAIB genotype produces type AB blood Multiple Allelic Traits Incomplete Dominance Heterozygote has phenotype intermediate between that of either homozygote Phenotype reveals genotype without test cross Example: in four-o’clock flowers, a cross between true-breeding parents with red or white flowers yields F1 offspring with pink flowers Homozygous red has red phenotype Homozygous white has white phenotype Heterozygote has pink (intermediate) phenotype Incomplete Dominance (cont.) When F1 plants self-pollinate, the F2 generation has a phenotypic ratio of 1 red-flowered: 2 pink-flowered: 1 white-flowered plant Each R1 allele produces pigment, but the R2 allele does not produce pigment In R1R1 individuals, a double dose of pigment result in red flowers In R1R2 individuals, single dose of pigment result in pink flowers R2R2 individuals do not produce pigment, thus flowers are white Incomplete Dominance (cont.) Incomplete dominance – the progeny show a phenotype intermediate to the parents Human Examples of Incomplete Dominance In humans, familial hypercholesterolemia (FH) is an example of incomplete dominance Individuals with two alleles (homozygous) for this disorder develop fatty deposits in the skin and may have heart attacks as children Individuals with one normal allele (heterozygous) and one FH allele may suffer heart attacks as adults Individuals with two normal alleles (homozygous) do not have this disorder Activity of the cystic fibrosis gene carrier individuals Incomplete Penetrance In some cases, a dominant allele may not always lead to a dominant phenotype in a heterozygote Example: polydactyly Polydactyly (extra fingers and/or toes) is an autosomal dominant trait Expression of polydactyly may require additional environmental factors or be influenced by other genes Beyond Mendel’s Laws Mendel’s study of inheritance dealt with simple, independently-segregating traits There are other patterns of inheritance other than the dominance/recessive relationship Mendel observed The environment can also influence the phenotype of an organism Mendelian Genetics Problems A rooster with grey feathers is mated with a hen of the same phenotype. Among their offspring 15 chicks are grey, 6 are black and 8 are white. What is the simplest explanation for the inheritance of these colors in chickens? What offspring would you expect from the mating of a grey rooster and a black hen? The children of a man with Type A blood and a woman with Type B blood were tested for their blood type. The results were: one son Type A, one son Type B, one girl Type AB and one girl Type O. What was the genotype of the man and woman? Show your Punnett square. Polygenic Inheritance Occurs when a trait is governed by two or more sets of genes having different alleles Each dominant allele has a quantitative effect on the phenotype; effects are additive Result in continuous variation of phenotypes Multifactorial traits are traits controlled by polygenes (multiple genes) subject to environmental influences Example: Melanin gene activity in Siamese cat Human Examples of Multifactoral Inheritance Human skin color is a polygenic trait affected by the environment Skin color is determined by two or more genes The more dominant alleles a person has, the darker their skin color Eye color is also a polygenic trait Amount of melanin deposited in the iris increases the dark color of the eye The more dominant alleles a person has, the darker their skin color Frequency Distributions in Polygenic Inheritance Polygenic Human Disorders Genetic disorder resulting from the combined action of alleles of more than one gene Often have major non-genetic influences (i.e. environmental factors) There are several examples of polygenic disorders Palate and lip disorders Hypertension and diabetes Allergies Some cancers Environment and the Phenotype In some cases, the environment can affect phenotype more than genetics In case of human height, nutrition is a major factor For example, temperature can affect the color of primroses and Himalayan rabbits