Text: Chapter 3 Human Biology Stage 3 Keywords DNA Protein synthesis mRNA Transcription RNA polymerase Template strand Coding strand Codon Intron Exon Ribosomes tRNA Anticodon Translation Start codon methionine Protein structure Endoplasmic reticulum (ER) Golgi bodies Protein synthesis Synthesis is the combining of small molecules to make larger molecules Proteins are long chains of amino acids. They are very large and consist of several hundred amino acids Proteins have a coiled shape Functions of proteins Proteins have many different functions: Structure: the protein keratin gives strength to hair, nails etc. Transport across membranes: some proteins form channels in cell membranes to aid the transport of molecules Communication: many hormones are proteins. Cell metabolism: enzymes are proteins . Enzymes help speed up the chemical reactions in a cell. Recognition: proteins in the cell membrane are unique to a particular person Movement: protein molecules are able to change shape and this is the basis for the movement of structures within the cell. The genetic code The blue print for the body’s proteins are contained within DNA The genes which form DNA determine the types of proteins a cell is able to make Genes are made up of a combination of 4 chemical ‘letters’ These chemical ‘letters’ are: Adenine & thymine Guanine & cytosine They always occur in pairs Each amino acid is coded for in a sequence of 3 bases. This is called a codon Transcription The DNA molecule is too large to leave the nucleus, so the code for each amino acid is taken from the DNA to the ribosomes by a special molecule called RNA (ribonucleic acid) This process is called transcription RNA is slightly different to DNA. Instead of the chemical ‘letter’ thymine, it has the chemical ‘letter’ uracil Transcription There are 2 types of RNA mRNA tRNA The RNA that takes the code from the DNA to the ribosomes is called messenger RNA (mRNA) mRNA is small enough to pass through the pores in the membrane around the nucleus Transcription Transcription is the process by which the mRNA molecule is formed using the code in the DNA molecule The genetic instructions are copied from the DNA to the mRNA molecule Transcription is triggered by chemical messengers that enter the nucleus from the cytoplasm and bind to the DNA at the relevant gene Transcription This causes an enzyme called RNA polymerase to begin the process of making mRNA RNA polymerase makes the double stranded DNA molecule come apart, about 17 base pairs at a time Transcription RNA polymerase then transcribes (copies) the bases from one strand of the DNA to make a complementary molecule of mRNA At the end of the gene there is a sequence of bases that tells the RNA polymerase to stop copying and the mRNA molecule is released Transcription Only one of the strands of DNA is copied during transcription This strand is called the template strand The other strand is called the coding strand Because the bases always form complementary pairs, the order of bases in the mRNA molecule will be the same as in the coding strand, but opposite to the template strand Transcription Not all the bases in the DNA molecule are code for an amino acid The non-coding sequences are called introns The base sequences that code for amino acids are called exons The mRNA that has been copied, contains both introns and exons Introns must be removed before the mRNA can be used to assemble amino acids into a protein Translation Translation is the process whereby a protein is synthesised from the information contained within a molecule of mRNA Translation occurs at the ribosome The starting sequence of bases (AUG) code for the amino acid methionine This is the start codon that every protein begins with (it may be removed later) This ensures that the ribosome attaches to the correct end of the mRNA Translation The ribosome then moves along the mRNA three bases at a time The ribosome pulls the mRNA through like a ribbon, reading the bases as it goes Translation Small molecules of RNA called transfer RNA (tRNA) bring the individual amino acids to the ribosome to be joined together as proteins There is at least one kind of tRNA for each of the 20 amino acids Each tRNA molecule has a section that binds to its corresponding amino acid Translation Half way along the molecule, the tRNA forms a tight loop. The loop has 3 nitrogen bases that form an anticodon These 3 bases of the anticodon can bind with the complementary bases of a codon in the mRNA molecule The anticodon determines the type of amino acids carried by the tRNA Example: the tRNA with the anticodon CGG always carries the amino acid alanine Translation As the ribosome reads the codon on the mRNA, the tRNA molecules with the matching anticodon are brought in The amino acids carried by the tRNA are joined together so the protein is assembled with the amino acids in the right order Each bond formed between the amino acid requires 1 ATP Once the tRNA has delivered its amino acid it detaches from the ribosome, it can then pick up another amino acid from the cytoplasm http://www.cjhs.org/teacherssites/taylor/ac cbio/DNA-PROTEINSYNTHESIS/PROTEIN-SYNTHESISMOVIES/3%20translation.swf After a protein has been synthesized, it then must be organised in a particular shape Protein shape is very important for the correct functioning of the protein Proteins have 3 or 4 levels of complexity in their structure Protein Structure 1. 2. 3. 4. Primary structure: is the sequence of amino acids in the chain that makes up the protein Secondary structure: this is either a coiled or folded shape that is brought by bonds between different parts of the amino acid chain Tertiary structure: this is formed by further bending and folding of the protein into globular or fibrous shapes Quaternary structure: when 2 or more chains of amino acids interact Packaging of proteins If proteins are to be used outside the cell, they must be packaged for secretion After proteins are made at the ribosome, they travel through the ER into the golgi bodies where they are modified and packaged via exocytosis Lipid and carbohydrate synthesis DNA only contains code for the manufacture of proteins However, it contains code for the production of enzymes (which are proteins) and therefore DNA indirectly controls the synthesis of lipids and carbohydrates PROTEIN SYNTHESIS – TRANSLATION & TRANSCRIPTION Class resources https://www.youtube.com/watch?v=h3b9ArupXZg&index=46&list=PL7A750281106 CD067 Bozeman Science Transcription and Translation: 12 mins Student resources • http://www.egs.ie/files/translation.swf • http://highered.mheducation.com/olcweb/cgi/pluginpop.cgi?it=swf::535::535::/sit es/dl/free/0072437316/120077/micro06.swf::Protein+Synthesis • http://www.wiley.com/college/test/0471787159/biology_basics/animations/fromG eneToProtein.swf • http://highered.mheducation.com/sites/dl/free/0073525634/291136/mRNA_synt hesis.swf • http://www.stolaf.edu/people/giannini/flashanimat/molgenetics/transcription.swf