Year 10 Technology & Applied Science Term 4, 2015 Task 4 Unit 4 : Extended Experimental Investigation (EEI) Downloaded from seniorbiology.com/eei.html. Courtesy of STEM teacher - Adam Delroy NAME: CLASS: CONDITIONS/INSTRUCTIONS TEACHER: Mr Delroy / Dr Walding DISTRIBUTION DATE: Monday 7th September 2015 - Week 9 DUE DATES: 3 Submissions Time - 8 weeks class time Submission guidelines: a submission of each part must be made to Moodle during the last lesson of each week as a draft. Final submissions of each part must be made by the due date identified, via Moodle. See Pg. 4 for details. EEI Proposal Part 1: Monday 14/9 (Week 10) Results Part 2: Friday 30/10 (Week 4) Discussion & Conclusion Part 3: Friday 13/11 (Week 6) UNIT/TOPIC: Unit 4: Microbes, Friends or Foe? TASK: Your task is to undertake an Extended Experimental Investigation (EEI) in order to develop and assess your understanding of the biological concepts related to the study of bacterial growth, and the processes associated with scientific investigation. You will be investigating the question: Are probiotics able to survive the pH variations of exposure through the intestinal tract to offer health benefits? CCEs (Common Curriculum Elements) that are well represented within this Task: 9 Using correct spelling, punctuation, grammar 26 Explaining to others 10 Using vocabulary appropriate to a context 33 Reaching a conclusion which is consistent with a given set of assumptions 13 Recording/noting data 41 Hypothesising 14 Compiling results in a tabular form 43 Analysing 15 Graphing 45 Judging/evaluating 16 Calculating with or without calculators 48 Justifying 20 Setting out/presenting/arranging/displaying 21 Structuring/organising extended written text Year 10 TAS EEI 2015 Page 1 CONTEXT; Probiotics are live bacteria and yeasts that are good for your health, especially your digestive system. We usually think of bacteria as something that causes diseases. But your body is full of bacteria, both good and bad. Probiotics are often called "good" or "helpful" bacteria because they help keep your gut healthy. Probiotics are naturally found in your body. You can also find them in some foods and supplements. Supposedly they can lower the amount of "bad" bacteria in your digestive system that can cause infections or other problems. However, are probiotics able to survive the pH variations of exposure through the intestinal tract to offer health benefits? In this task, you will select a probiotic (either Lactobacillus acidophilus probiotics or Bifidobacteriam probiotics) and test whether these microbes are able to survive the pH exposures found in the mouth, oesophagus, stomach, proximal and distal small intestine and large intestine to offer their health benefits. Some notes from Wikipedia about the bacteria: Lactobacillus is a type of bacteria with multiple different species in the genus. Most Lactobacillus species in humans are considered harmless. Lactobacilli live in the urinary, digestive and genital tracks of humans. Lactobacillus is possibly effective for preventing diarrhoea in children. Some strains of Lactobacillus and other lactic acid bacteria (LAB) may possess potential therapeutic properties including anti-inflammatory and anti-cancer activities, as well as other features of interest. Some Lactobacillus species are used as starter cultures in industry for controlled fermentation in the production of yogurt, cheese, sauerkraut, pickles, beer, wine, cider, kimchi, cocoa, kefir, and other fermented foods, as well as animal feeds. Some Bifidobacterium strains are considered as important probiotics and used in the food industry. Different species and/or strains of bifidobacteria may exert a range of beneficial health effects, including the regulation of intestinal microbial homeostasis, the inhibition of pathogens and harmful bacteria that colonize and/or infect the gut mucosa, the modulation of local and systemic immune responses, the repression of procarcinogenic enzymatic activities within the microbiota, the production of vitamins, and the bioconversion of a number of dietary compounds into bioactive molecules. Bifidobacterium improve the gut mucosal barrier and lowers levels of lipopolysaccharide in the intestine. During this unit you will be provided with an opportunity to learn about aseptic inoculation procedures for microbial growth. Once you have been upskilled, you and your 3-4 group members will decide on a probiotic to test from the range provided to you. You will receive 24 agar nutrient growth plates to allow you to inoculate 2 plates per upper and lower limit pH exposure group for your probiotic of the following digestive sites: Mouth: pH 6.5 to 7.5 Proximal Small Intestine: pH 6.6 to 8.5 Oesophagus: pH 4 to 6.5 Distal end of Small Intestine: pH 4 to 7.5 Stomach: pH 1 to 2.5 Large Intestine: pH 4 to 7 While you will work with your peers to conduct the investigation, you will write and submit your own sections of the scientific report (see Pg. 4 for details). Submissions of drafts and finals are made through Moodle. Year 10 TAS EEI 2015 Page 2 RESEARCHING THE TOPIC: You will need to develop an understanding of the biological principles of bacterial growth. Below is a list of guide questions to develop your report that may be useful for your initial research of this topic. You are not required to answer all of these questions. 1. What are the cellular structures of bacterial cells and what function do these structures serve? 2. What is binary fission? 3. What environmental conditions support bacterial population growth? 4. How can I measure bacterial growth? 5. What structural components of Lactobacillus acidophilus or Bifidobacteriam influence their ability to survive the pH exposures within the gastrointestinal tract? 6. What health benefits do Lactobacillus acidophilus or Bifidobacteriam provide? By use of the library, online resources, textbooks or other source of information (parent, expert) you will need to develop an understanding of the biological principles behind the topic. Your notes from this library research will form the basis of the Justification of the Hypothesis. It will be used to tell a story that generates interest in the reader and explains the biological concepts related to the field of your research, and link to the practical investigation to follow. Journal articles about each of the 2 bacteria will be provided to you to help answer these questions. You only need to read and answer the focus questions of the bacterium you are conducting research into. Answers to focus questions will be provided on Moodle. It is suggested that you start you research with the online databases available on Moodle. The following databases could be of valuable use: Expanded Academic, Encyclopaedia Britannica, University of Queensland, State Library of Queensland, ECOS and Scientific American. SCIENTIFIC REPORT: Report writing involves collating all you have done into a report of your investigation. A scientific report style guide has been provided to help you structure your report (see Appendix 1). Please note that other people’s ideas, statements, diagrams, photos and so on should be correctly referenced, using in-text referencing. Your work must not contain plagiarised material – this also includes copying large sections of the report from other members in your group. Harvard 6th or APA 5th are appropriate referencing styles for use for both in- text referencing and reference lists at the end of your report. Year 10 TAS EEI 2015 Page 3 TIMELINE: Please use as a guide for your EEI planning. Week 9 Activity in class time Double: Introduction to Microbiology Practical Single: Proposal Part 1 - Aim, hypothesis, hypothesis justification, variable identification & reference list. 10 1 2 3 4 Homework Proposal Part 1 - Aim, hypothesis, hypothesis justification, variable identification & reference list. Year 10 Camp Double: Conduct Experiments Inoculate 2 agar plates (ie. 2 trials) for each of the upper and lower ranges of pH’s for 3 digestive tract sites: Mouth, Oesophagus, Stomach (ie. 12 plates) for a selected probiotic Single: Collect data from inoculation results – quantitative/ qualitative, photographs Double: Conduct Experiments Inoculate 2 agar plates (ie. 2 trials) for each of the upper and lower ranges of pH’s for 3 digestive tract sites: Proximal Small Intestine, Distal Small Intestine, Large Intestine (ie. 12 plates) for a selected probiotic Single: Collect data from inoculation results – quantitative/ qualitative, photographs Double/Single: Generate presentations of data collection to show trends and interrelationships. Include any manipulation of data as required. Double: Investigations into bacteria structure and growth rates Single: Research into the bacterial defence mechanisms of lactobacillus and bifidobacterium. Year 10 TAS EEI 2015 Significant Dates EEI distributed – 7/9 TASA: Draft EEI Proposal Part 1 due into Moodle during Session 7 Thursday 10/9 TASB: Draft EEI Proposal Part 1 due into Moodle during Session 4 Friday 11/9 Monday 14/9 3:10pm via Moodle EEI Proposal Part 1 - Aim, hypothesis, hypothesis justification, variable identification & reference list. Results Part 2 – Generate presentations of data collection to show trends and interrelationships. Include any manipulation of data as required. Results Part 2 – Generate presentations of data collection to show trends and interrelationships. Include any manipulation of data as required. Results Part 2 – Generate presentations of data collection to show trends and interrelationships. Include any manipulation of data as required. Results Part 2 – Generate presentations of data collection to show trends and interrelationships. Include any manipulation of data as required. TASA: Draft Results Part 2 due into Moodle during Session 7 Thursday 22/10 TASB: Draft Results Part 2 due into Moodle during Session 4 Friday 23/10 Friday 30/10 3:10pm via Moodle – Results Part 2 – Presentation of trends and interrelationships, including manipulation of data. Page 4 5 6 Double/Single: Research into the bacterial defence mechanisms of lactobacillus and bifidobacterium. Double/Single: Finalise Discussion & Conclusion for submission. Year 10 TAS EEI 2015 Discussion & Conclusion Part 3 – Analysis of trends and interrelationships from data presentation, explanation of results linked to biological concepts, error identification and improvement suggestions, and conclusion. Discussion & Conclusion Part 3 – Analysis of trends and interrelationships from data presentation, explanation of results linked to biological concepts, error identification and improvement suggestions, and conclusion. TASA: Draft Discussion & Conclusion Part 3 due into Moodle during Session 7 Thursday 5/11 TASB: Draft Discussion & Conclusion Part 3 due into Moodle during Session 4 Friday 6/11 Friday 13/11 3:10pm via Moodle – Discussion & Conclusion Part 2 – Results analysis, explanation of trends, error discussion, conclusion and reference list. Page 5 YEAR 10 TAS Unit 4: Microbes, Friends or Foe? CRITERION: SKILLS DIMENSION (SD) Development of questions and Development of questions justified hypotheses that can be and informed hypotheses investigated scientifically that can be investigated scientifically Thorough explanation of how to manage fairness and reliability Task 4 Name: __________________________________ Research Question and Hypothesis Development of questions and Guided development of hypotheses questions and hypotheses Explanation of how to manage fairness and reliability Variable Identification Explanation of how fairness and reliability are considered Selection of, or partial consideration of fairness and reliability Use of given questions Use of given methods of investigation Results Use appropriate equipment to systematically collect and accurately record reliable data Use appropriate equipment Identification of where digital to systematically collect and technologies can be used to record reliable data enhance the quality of data Selection of, or partial design Use of given methods of of methods investigation Identification and effective incorporation of digital technologies to enhance the quality of data Identification and Identification of where digital incorporation of digital technologies can be used to technologies to enhance the enhance the quality of data quality of data Selection of, or partial design Use of given methods of of methods investigation Discussion and Interpretation of Data and Conclusion Analysis of data, selection Analysis of data, selection of Statements about: Restatement of: of evidence, development evidence, development and - patterns in data and - data and findings and justification of justification of conclusions to: conclusions conclusions to: - identify alternative - alternative explanations - identify plausible explanations for findings alternative explanations - explain any sources of for findings uncertainty - explain any sources of uncertainty and identify the effects Independent design, justification Independent design and Independent design and Selection of, or partial design Use of given methods of of improvements to appropriate improvement of improvement of appropriate of methods investigation methods appropriate methods methods of investigation Analysis of data, selection of evidence, development and justification of conclusions to: - identify and justify plausible alternative explanations for findings - explain any sources of uncertainty and describe the effects Communication Concise and coherent evidencebased arguments, selection of appropriate representations, scientific terminology and text types to communicate science ideas for specific purposes A+ A A- Coherent evidence-based arguments, selection of appropriate representations, scientific terminology and text types and to communicate science ideas for specific purposes B+ B B- Construction of evidence based arguments, selection of appropriate representations and text types to communicate science ideas for specific purposes Construction of arguments, Fragmented communication of selection of representations, science ideas everyday language and text types to communicate science ideas C+ D+ C C- D D- E+ E E- CRITERION: UNDERSTANDING DIMENSION (UD) Hypothesis Justification and Discussion Linking of evaluation, analysis, Evaluation, analysis, Partial explanation, explanation and description of explanation and description of description, identification, phenomena, with science phenomena definition and recall of knowledge science knowledge Application of science Application of science Application of science Application of science knowledge to generate knowledge to generate knowledge to generate knowledge to generate justified solutions in simple and informed solutions in simple solutions in simple situations partial solutions in simple complex situations situations, with progress situations towards some that are complex A+ A AB+ B BC+ C CD+ D DIntegration of evaluation, analysis, explanation and description of phenomena, with science knowledge UD Grade: _______ Year 10 TAS EEI 2015 Recall of science facts Recall of science facts E+ E SD Grade: _______ Page 6 E- APPENDIX 1 THE SCIENTIFIC REPORT STYLE GUIDE (complete only the sections being assessed) Title page: Subject, assessment task type, title, your name, date, teacher’s name Introduction: Research Question and Aim you have posed and the Hypothesis to be tested. The Research Question should obviously be in the form of a question, eg “What are the best conditions for plant growth? What factors influence the flight of an arrow? How is the corrosion of a shipwreck influenced by …?” The Aim should be in the form of an explicit statement relating to your variables, eg: “To investigate the effect of (manipulated variable) on (dependent variable) when (controlled variables) are kept constant. The Hypothesis is your predicted outcome of the investigation. It should be in the form: “That as (manipulated variable) is increased, the (dependent variable) will …”. Although the aim & hypothesis is formulated prior to the commencement of the investigation, these are written in past tense with passive voice as the report is compiled upon completion of the investigation. Justification of hypothesis: You will need to justify your hypothesis by referring to relevant scientific principles from your research. You will need to reference your sources. Variable Identification: Identify the independent, dependent and controlled variables. Method: A description of what you did in your investigation. It should contain two sections: Materials: alphabetical list of chemicals and apparatus used for this investigation Procedure: a replicable, stepwise description in passive voice. ‘Replicable’ means that someone else could repeat the experiment by following your procedure. A diagram/photo(s) of apparatus setup should also be included. Note: There is no need to describe small non-scientific procedures here. NOTE: This has been provided for you. Results: The collected results should be displayed in forms that are appropriate to your data; eg tables, graphs, photos. Each should be appropriately labelled. (Numbered, title, columns/rows labelled)) NOTE: There should be NO interpretation of the data in your results. Discussion: (approximately 500 words) You will need to show evidence of critical thinking in interpreting your data in relation to your hypothesis and theory presented in your hypothesis justification. This is an opportunity to examine any mathematical relationships in your data, to critically discuss various aspects of the experiment, such as: what generalisations can be made to support or refute your hypothesis, the limitations of the result, the method used and possible improvements, measured quantities that may have limited the accuracy of the result and further related investigations that this experiment could lead to (any why). It will also need to written in passive voice. Conclusion: You should state very briefly the essential conclusion or conclusions you have drawn from the experiment. It will need to be written in passive voice. It should satisfy the statement set out in the Aim at the beginning. Be sure to include any conditions that apply to your result (eg ‘at constant temperature’). It is important not to overstate what you can rightly claim as a result of the experiment. Statements like ‘the results supported…’ are more justifiable than ‘the results proved…’. Reference List: Guidelines for a reference list and referencing can be found through the MBC Secondary Library. Year 10 TAS EEI 2015 Page 7