1 Frank Visco - Biology Copy this page Email: OCCBiology@aol.com (preferred over phone messages) Phone: 714-432-0202 ext. 22740 Office hours: by appointment only Web site: http://occonline.occ.cccd.edu/online/fvisco or through OCC web site – www.occ.cccd.edu Includes all images used in lecture ~ PowerPoint (PPT) Version ~ & pdf. Version (no movement) Includes all reviews for exams 1 Attendance really does count for borderline grades This signifies item important for test purposes 2 2 Instructor Frank Visco N.S. 100 Fall 2008 2b Tues. Tues. LAST NAME Aceves Alonzo FIRST NAME Thurs Tues Thurs Tues Thurs LAST NAME FIRST NAME Oct. 7 Oct. 7 Oct. 9 Oct. 14 Oct. 16 Oct. 21 Oct. 23 Aceves Salvador Alonzo Sarah SA SA Anari Shiva SA Atkins Celeste Aytekin Selcuk Salvador Tue Thurs Tues Oct. 28 Oct. 30 Nov. 4 Sarah Anari Shiva Atkins Celeste Aytekin Selcuk Barnes Chase Bell Tiffany Benjamin Royale Bowlin Bradley Brittell Elizabeth Burgos Gabriel Chadwick Kaylee Conroy Brian SA 3 In this section (biology): Characteristics of Life Cell Theory Chemistry of Life Midterm 3 (30 points; each question worth ¾ points) Cell structure and function DNA structure and function Viruses Biotechnology Bioenergetics Midterm 4 (30 points; each question worth ¾ points) Cell Division Gametogenesis Mendelian Genetics Evolution Origin of Life Kingdoms of Life Ecological Concepts and concerns (tested on course Final) Midterm 5 (30 points; each question worth ¾ points - including Final)4 3 Life – A complex physical state and complex series of chemical reactions with these characteristics -Acquisition and use of energy -Reproduction -Growth and development -Response to stimuli -Adapt to changing environment -Highly organized -homeostasis 5 Morphogenesis of the caterpillar into a pupa and then into the butterfly is an example of growth and development. -Acquisition and use of energy -Reproduction -Growth and development Caterpillar -Ability to respond to stimuli -Adapt to changing environment Pupa -High degree of organization -Acquisition and use of energy -Reproduction -Growth and development -homeostasis Butterfly -Ability to respond to stimuli -Adapt to changing environment -High degree of organization -homeostasis 6 5 Stem cells - building blocks of all tissues Brain Stem cell can become any of 220 cell types Lung Heart Liver Kidney 7 8 -Acquisition and use of energy -Reproduction -Growth and development -Ability to respond to stimuli -Adapt to changing environment Brain Neurons can be derived from human embryonic stem cells. -High degree of organization -homeostasis Embryonic Stem Cells are an example of growth and development 78 8 Cell Theory - 4 components: 1. Cell is smallest unit of life 2. All cells derived from previously existing cells 3. All cells show basic similarities in their chemical make-up and metabolic activities 4. An organism (like a rabbit) is sum of all of the individual cells composing organism 9 1. Red Blood cells are an example of the smallest unit of life 9 10 2. All cells are derived from previously existing cells – that is cells do not arise spontaneously from non-cells, instead cells come only from other cells by cell division. No 10 11 11 Experiments to create life (cells) from non-life have not been successful 12 3. All cells have same basic chemical structure and chemical reactions. Blue Print #1 Blue Print #2 12 13 Human DNA Human DNA make human products Nutrients same for all life Dog DNA make dog products Dog DNA 14 13 Blueprint Nutrients or Raw Materials Blueprint 14 15 15 4. Activity of an organism (such as a human) is the sum of each cell’s individual activities 16 Why is chemistry so important to LIFE? Brain activity Smell, taste Cell The human body has thousands of structure chemicaland reactions making function thousands of chemical products photosynthesis Heartbeat Sperm and egg Cell movements 17 16 17 Some chemicals of LIFE Oxygen carrying Humans make about 35,000 different chemical products Photosynthesis water Insects make about 10,000 chemical products Bacteria make about 1000 chemical products neurotransmitters Energy Viruses make about 10 chemical products 18 Matter and energy – compose everything in NATURE Matter – anything that takes up space and has mass (weight) Energy – capacity to bring about movement against an opposing force 18 19 Solid (Ice) Gas (Fog) Three states of matter (for water) Liquid 19 20 Chemical Elements are pure forms of matter Examples include: Elemental mercury Elemental iron Elemental silver Elemental gold Elemental bromine 21 20 21 Periodic Table of Elements; Includes all natural elements and experimentally made elements. 22 Everything in nature is made of the elements on the periodic table. 22 23 23 Hydrogen (H) is simplest element The Periodic Table of Chemical Elements 24 Each element is composed of specific atoms: Atoms are usually composed of 3 subcomponents: Protons – positive (+) charge (red) Electrons – negative (-) charge Neutrons – no charge or neutral (+/-) charge (white) 25 24 Hydrogen Atom + Electron shell (or energy level) has only 1 electron (-) Nucleus of Atom has only 1 proton (+) 25 26 0.00000000005 meters = distance between the nucleus (+) and the electron orbital (-) or 5/10,000,000,000 of a meter or 5 ten billionths of a meter 26 27 27 Helium Atom Two electrons (-) are in an shell around the nucleus; nucleus has two protons (+) and two 28 neutrons (+/-) 28 29 29 1 There are three forms of Hydrogen. Protium - one proton, one electron Deuterium - one proton, one electron, one neutron Tritium - one proton, one electron, two neutrons Isotopes - alternate forms of same element; different numbers of neutrons.30 30 Radioactive isotope greater number of neutrons than protons Protium Deuterium Tritium Radioactive Tritium is unstable and becomes more stable by giving off energy or radiation = radioactivity 31 From water and soil under houses Produces alpha radiation May cause up to 50% lung cancer if inhaled 31 32 32 1 Radon radiation tracks in lung tissue Cells hit by tracks can become cancer cells 33 33 1 Nuclear Weapons 5 kilograms (11 pounds) of weapons grade plutonium (or uranium) = August 9, 1945 - Nagasaki 100,000 tons of chemical explosive, such as dynamite 34 Atomic Weight vs. Atomic Number Atomic Weight of an Atom = number of protons and neutrons Atomic Number of an Atom = number of protons 35 34 Hydrogen (Protium) Atomic number = 1 Atomic weight = 1 Deuterium Atomic number = 1 Atomic weight = 2 36 35 36 1 Carbon Atom Atomic number = 6 (protons) Atomic weight = 12 (6 protons and 6 neutrons) 37 Atomic number = ?? 8 Atomic weight = ?? 16 Protons (8) neutrons + (8) electrons (8) 37 38 A human body contains 6.27 x 1027 atoms, or 6,270,000,000,000,000,000,000,000,000 atoms Hydrogen atoms = 4.22 x 1027 Oxygen atoms = 1.61 x 1027 Carbon atoms = 8.03 x 1026 39 38 Calculation of the total number of each atom found in the human body See page 1-7B Oxygen 1.61 x 1027 atoms Gold 2 x 1019 atoms 40 39 Has 1 Has 4 Holds 2 electrons Holds 8 electrons Has 1 Has 2 Has 8 Has 8 Holds 8 electrons 41 40 Hydrogen has room for 2 electrons in the first shell, but only has 1 electron. H C Carbon has 2 electrons in the first shell and only 4 electrons in the second shell, but Carbon can hold 8 electrons in the second shell, so Carbon can pick up 4 more electrons in the second shell. 41 42 4 hydrogen (H) share their electrons with the 4 electrons in the outer shell of one Carbon (C) Sharing of electrons is called a covalent bond H H H CH4 = molecule C H 43 42 43 1 Each H atom shares an electron with the other H Chemical bond Covalent bond – sharing electrons 44 44 1 Covalent bond – sharing electrons O needs 8 electrons Each H needs 2 electrons 45 Has 1 Has 4 Holds 2 electrons Holds 8 electrons Has 1 Has 2 Has 8 Has 8 Holds 8 electrons 46 45 Polar molecule (+) and (-) (-) (+) Non polar molecule (+) or (-) (+) (+) (+) (+) (+) (+) 47 46 Hydrogen Bond = slight attraction of positive end of one water molecule to slight negative end of another water molecule. Hydrogen bond 47 48 48 1 Hydrogen bonds at surface of water create “surface tension.” Water strider (insect) can literally walk on water because the tension on the surface of water is firm 49 Molecules inside a water drop are attracted in all directions. Drops on the surface are attracted to the sides and inward. Water drop Leaf Surface 49 50 Surface Tension – bonds between molecules at the surface of a liquid are stronger than bonds within the liquid Cohesion Adhesion 50 51 51 1 Adhesion – water sticking to other material Cohesion – water sticking to itself 52 adhesion cohesion xylem Transpiration – evaporation of water through leaves Water moves from roots to leaves 53 52 Cl (chlorine) has 17 (+) and 17 (-) Na (sodium) has 11 (+) and 11 (-) 17+ 11+ Na+ (sodium ion) has 11 (+) and 10 (-) Ion = has net (+) or (-) charge Cl (chloride ion) has 17 (+) 54 and 18 (-) 53 Table salt Positively charged Na+is attracted to negatively charged Cl ; when they combine they form an ionic compound NaCl or table salt. 54 55 (+) end Water molecule (-) end 55 56 56 1 Ions and water play an important role in the metabolism (chemical reactions) of plants and all other forms of life. Many ions enter through the roots. 57 Ions attached to soil particles make their way into root cell. Diagram from Biology by Solomon et al, 5th ed. 57 58 58 1 Why is water so important to life? 1. It is the solvent in which all life’s molecules are dissolved 2. It is the medium in which all life’s processes occur 59 Why does ice float? Why is this important? 59 60 Ice floats because ice is less dense than is liquid water. 61 60 1 Hydrophilic and Hydrophobic compounds Hydrophilic (water loving) compounds attracted to water (sugar, salt) Hydrophobic (water hating) compounds not attracted to water (oil, fat) 61 62 Water has a high specific heat which allows it to buffer temperature extremes Moderate temperature changes Extreme temperature changes 62 63 Specific Heat Defined: The specific heat of a substance is defined as the amount of heat that must be absorbed or lost for 1 g of that substance to change its temperature by 1º C. The specific heat of water is 1.00 cal/g/ºC. Specific heat for ethanol is 0.6 cal/g/ºC. 64 63 64 1 Acids and Bases 65 pH Scale (measures amount of H+) 0 1 2 3 4 5 6 7 8 9 10 11 12 Acid increases Neutrality Acid 13 14 base increases Base 65 66 pH Scale (measures amount of H+) 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 Increasing H+ (Hydrogen ion concentration) = increasing acid 66 67 What is an acid? pH? Acid – gives up Hydrogen (H+) ions. pH - scale used to measure H+ (acid). 67 pH scale = 0 – 14, lower numbers = more H+. pH of 0 is considered most acidic pH of 14 - least acidic HCl (acid) + H2O H+ (acid) + Cl- + H2O 68 68 1 pH 3 pH 5 pH 0 pH 1 pH 4 pH 7 pH 13 pH 11 pH 10 69 Stomach acid Body Fluids 69 70 Buffer – solution that maintains pH 1000 H+ (acid) ions Buffer 100 H+ acid ions 900 H+ ions held by buffer pH before acid = 7 pH after acid = 7 Hydrochloric acid 70 71 Dead trees caused by acid rain in Great Smokey Mountains 71 1 Below pH 5.6? Reproduced by permission of JLM Visuals 72 73 72 73 1 74 Sulfuric acid Nitric Acid Sulfur dioxide Nitrogen dioxide Acid Rain 74 75