BIO111 Biology I – Science Fall 2013 Professor Jill Carroll, MS jcarroll@faculty.camdencc.edu BIO111-17 Class Meeting Time: Tuesday & Thursday 2:30 – 3:20pm lecture Halpern 225 3:30 – 5:10pm lab Halpern 217 Pre-requisites ENG013, ENG023, MTH029 Course Description This introduction to biology covers in detail the basic biological concepts of scientific method, cell structure and function, metabolism, evolution, genetics, and ecology, accompanied by appropriate illustrations. The principles are then discussed in relation to viruses, bacteria, protozoa, plants and fungi. Laboratory exercises are chosen to complement the material presented during lecture hours. Required Materials Biology (9th edition) Campbell, Reece, et al 2010 ISBN 0-321-55823-5 Exploring Biology in the Lab edited by Rita Connolly Laboratory drawing paper (8 ½” x 11” unlined, white paper – no holes or perforations) Hard lead pencils http://carrollcccbio111.wikispaces.com/ Wikipage contains lecture powerpoints, exam review sheets, announcements, etc Attendance Policy 1. Attendance will be taken at every class meeting. Essential components of attendance are arriving on time, staying for the entire class, and NOT SLEEPING – sleeping through class does not count as being here. Attending lab but missing lecture, or vice versa are equal to ½ an absence. Attendance will be the determining factor for borderline grades. 2. All assignments must be turned in on time, regardless of attendance. All assignments are to be turned in at the beginning of class. Assignments may be handed into the Biology Department if you know in advance you will miss class. Assignments sent by email must be dated and timed before class in order to be considered on time. You must bring an identical hard copy to the next class as I will not print out any sent assignments. 3. You are responsible for all assignments, even if you are not in attendance when the assignment is given. 4. If you miss a due date for either a lab report or the article assignment, you may turn it in no later than the next class meeting. There will be an automatic grade reduction for late assignments. Any assignment not handed in at that point will receive a zero. Late take-home quizzes are not accepted. 5. Attendance for laboratory sessions is required in order to get credit for laboratory work (drawings, reports, informal write-ups). No laboratories can be made up. 6. Anyone who misses a total of 8 classes for the semester will receive a “NA” for their final grade, regardless of their class average. “NA”, which stands for “not attending”, can adversely affect your status for financial aid, student visas, etc. There are no exceptions to this policy. Quizzes 1. Quizzes are usually given during the first 10 minutes of class. You will not be given any additional time to complete the quiz if you are late to class. 2. Your lowest 2 quiz scores are dropped, which includes any missed quizzes due to lateness or absence. 3. No late take-home quizzes will be accepted. 1 Exams 1. There will be 3 exams and a cumulative final. Consult the lecture schedule for exam dates and their covered chapters. 2. All regular exams are in a multiple choice, matching, and True/False format. 3. Exams will use Scantron sheets – it is your responsibility to bring #2 pencils to class on test days. 4. If an emergency occurs and you miss an exam, you must notify me (by email) within 24 hours. You must provide documentation of your emergency event. All makeup exams will be given on the last day of class after the final exam. Makeup exams have a short answer and essay format. Only one exam can be made up. Laboratory Work 1. Laboratory Safety – You must read the safety policy found in your lab book, and sign the agreement provided. If you have purchased your book used and there is no enclosed agreement you can access the agreement by going onto the Biology homepage of the College. This agreement must be handed in before you will be allowed to participate in any laboratory – no signed safety agreement, no lab. This means that you will receive a zero for any missed work. 2. You will not be allowed to participate in lab if you are not wearing the proper attire as discussed in class!! 3. Consult the laboratory schedule for the due dates of formal lab reports. 4. Informal lab write-ups and drawings are to be completed in class and must be handed in before leaving in order to get credit. Two grades will be dropped. Laboratory Drawings 1. Consult the laboratory schedule for when lab drawings are to be done. Drawings must be on unlined white paper with no hole/perforations. All drawings are to be done in pencil. 2. Proper heading set up: Lab Exercise number Name Lab Exercise name Date BIO111-D51 All lines should be single line drawings. A darker structure should be indicated as such by “stippling” – do not color in, shade, or otherwise darken in the structure. Simple leader lines should be used – no arrows. All writing should be printed. Drawings should be labeled with organism name, important visible structures, and magnification, when applicable. 3. NEVER enclose your drawing in a circle that represents your field of view – this would mean that you are drawing EVERYTHING within that field, which you are not. 4. Lab drawings will be done in class and handed in that day. No late drawings will be accepted. Formal Laboratory Reports 1. You will have 2 formal laboratory reports to do – consult the laboratory schedule for the specific labs and due dates. If you choose to do all three reports, your lowest score will be dropped. 2. All reports should be typed and double spaced. 3. Use past tense and impersonal language – no “we, I, etc” Example: don’t say “Next, I placed 5ml of water in a test tube”, write “5ml of water was placed in a test tube”. 4. Reports should have the following labeled headings: Purpose – reason for performing the experiment Materials – in list form, everything used – chemicals, glassware, equipment Methods – concise, step by step instructions on what was done Results – raw data only, usually in table form Discussion – interpretation of data, answers to any assigned questions 2 Scientific Article Assignment Obtain four articles from peer-reviewed journals on the same biology-related topic. Two articles must be original (primary) articles from the scientist; the remaining two must be secondary articles/reviews. A library orientation will explain these differences. Do not choice case studies or papers that are just statistical analyses of research. If you happen to miss the orientation day, see any reference librarian for help with finding articles. Include in your paper: 1. A three-to-four paragraph summary of each article (each summary should be approx. one page in length – typed, double-spaced). Include reason for study, what was done, results and their significance. 2. A discussion section (YOUR opinion) (minimum 2 {FULL} pages – double-spaced) a. How do the different articles support/refute each other? In the case of articles presenting opposing views/evidence, include in your opinion which has a stronger validity and why. b. Question their techniques/study design, and include anything that you think could have been done to improve the validity of the experiment/observation. c. Offer some further studies that would be needed to confirm outcomes. d. Your general opinion on the subject; what you learned from the articles. Include a complete bibliography of your articles (author names, article title, journal title, journal number/edition, pages which article appears, date of publication). When quoting directly from the article or indirectly with ideas from the article, make sure to reference appropriately. Either place in parentheses the author’s name, or number your articles in your bibliography and place the corresponding number in parentheses. Articles should be in the order that they are first used in your paper. While this is not an English class, it is expected that you will use proper spelling and punctuation, and demonstrate appropriate sentence and paragraph structure. Your grade may be lowered for extreme cases of substandard writing. Class Preparedness 1. Assigned reading – there is not enough time to cover all of the material completely, and reading the assigned chapters is essential to success. I suggest that you skim the chapter before class in order to familiarize yourself with concepts/vocabulary, and then go back and read the chapter carefully after lecture. 2. Consult the laboratory schedule and read the day’s experiment before lab to avoid making errors in experimental methods. Days when lab drawings are done are indicated on the lab schedule – make sure you remember your paper and pencils. 3. All typed assignments should be printed out (single-sided), stapled, etc before handing in. Do not wait until the last minute to print work out. Please note that your printer running out of ink is not an acceptable excuse to hand in late assignments. Technology Policy 1. Use of any electronic device is subject to my approval. No text messaging or camera phones are allowed in class. Electronic translators are prohibiting during testing. 2. Phones and pagers should be set to silent. These should be answered only in case of emergency – leave the room quietly and take care of the matter in the hall as to not disturb other students. It is not acceptable to continually leave class for these situations. 3. When sending an email, put some reference to class in the subject line, especially if you are using an account other than your Camden County College one – otherwise I may not open an email from an address that I do not recognize. Use proper English – spelling, punctuation and grammar – in all emails. 3 Classroom Behavior 1. Come to class on time. If you must come in late or leave early, do so quietly as to not disturb class activities. 2. During class I expect you to be quiet and attentive. Side conversations are extremely rude and will not be tolerated. No text messaging!!!! 3. Any student who disrupts the class will be removed from the classroom. 4. I encourage questions and class discussions, but please be aware that I may not be able to break immediately from lecture. I will acknowledge you as soon as I am able. 5. After class your chairs should be placed back under the desk, all supplies put back onto the cart, microscopes in their cabinet, trash thrown out, and lab counters wiped clean. 6. You can expect me to respect you as a student, and treat you fairly. I expect students to be courteous and respectful to me and other students at all times. Exam Etiquette 1. Come prepared with several pencils and an eraser. 2. Be on time! Once someone has completed their test and left the room, no late arrival will be allowed to take the test – you will have to take a makeup. 3. All books and other materials must be out of sight; all hats must be off. 4. Turn off everything that makes noise. You may NOT leave the room to use the phone or answer a page. No electronic devices, including anything with headphones, is allowed during any testing. 5. Use the bathroom before the exam starts. If there is a reason why you need to make frequent bathroom trips, let me know beforehand and you will be given the test one page at a time, which must be handed in before leaving the room. 6. You can not leave the room during an exam. 7. Keep your eyes on your own paper, and guard your own. You may not talk to other students after the exam has been handed out. If I suspect cheating, the exam will be taken and you will be reported to the Administration. 8. Academic Honesty – Academic dishonesty in any form will not be tolerated. This includes cheating, copying another student’s work, use of unauthorized aids during exams, and plagiarism. Any assignment which is compromised by academic dishonesty will receive an automatic zero. The student will receive an “F” for the course and may be subject to further action from the Administration. 4 Suggestions For Success in this Course/Tutoring 1. Attend class faithfully and on time. 2. Make accurate and detailed notes during lecture. (you may record lectures if you choose) 3. Complete all readings. I suggest skimming the chapter prior to lecture, and then carefully read the appropriate material after lecture. Annotate (add new comments to) your notes as you review them. 4. Participate! Ask questions or share your thought in class. Learning is active, and not just what you can “soak in”. Forcing yourself to formulate a question is as important to learning as the answer (science is not just answers; it’s also how to ask questions). 5. Most learning occurs outside of the classroom, so expect to spend more time on the course outside class meetings than in them. The recommendation for college courses is two hours outside of class for every hour in class. For this course, that means 12 hours of outside time PER WEEK (adjust accordingly for shortened summer classes in which you have less time to learn the same amount of material as a regular’ semester). 6. Turn in professional quality written work, as if you are applying for a job or promotion. For example, proofread carefully, staple neatly, and follow instructions. These sorts of details may seem insignificant, but in the real world of unemployment – and this course – they are difference makers. 7. Try to synthesize the material (be comparative) and ask yourself questions that require more than just memorization. You should regularly spend some time reviewing earlier material, and the rest of your time relating it to and working with new material. 8. Balance your study time between time alone and time with others. Going solo may seem easier, but it lacks some of the benefits of group work. 9. If you are having trouble in the course, resist the temptation of blaming your environment, course policies, or me. It just isn’t productive use of your time, and won’t in the end help you do any better. The most successful students avoid this mindtrap when a course becomes difficult, and focus their energy on changing their study habits. 10. Walk in tutoring for Biology I is available as a free service in the library. Consult the library for the hours of this free, walk-in service. 11. Program for Academically Challenged Student Policy Statement – Camden County College is committed to providing reasonable accommodations for all persons with disabilities. If you have a specific physical, psychiatric, or learning disability that requires special accommodations, please contact the PACS Office (Disability Support Services Office) at (856) 227, 7200 ext 4430 as soon as possible to ensure that such accommodations can be implemented in a timely fashion. Learning Styles (adapted from Getting Ready for Microbiology Lori K. Garrett and Judy Meier Penn) There are three main types of learners – visual, auditory, and tactile: 1. Visual learners – you tend to think in pictures, and learn well from visual aids such as pictures, diagrams, and tables. Suggestions: a. Draw pictures; make flowcharts and concept maps b. Use flashcards 2. Auditory learners – you learn well from traditional lectures and discussion, and may have difficulty with read material until you hear it explained. Suggestions: a. Read the textbook and your notes out loud b. Record lectures and listen to them later c. Discuss the material with others 3. Tactile learners – you learn best by active, hand-on participation and activities. You tend to become bored easily from sitting too long. Suggestions: a. Rewrite your notes b. Make your own flashcards 5 Grading Written work (75%) Quizzes – 10% (lowest 2 dropped) Exam #1 – 10% Exam #2 – 10% Exam #3 – 10% Final exam – 20% Article Assignment – 15% Laboratory (20%) Lab Reports (two - 5% each) – 10% Informal write-ups and drawings – 10% Participation 5% This includes attendance (arriving on time, staying the entire time), ACTIVE participation in lab and its cleanup, etc Grade conversion Lab Reports and Article Assignments 5 = 100 4 = 90 3 = 80 2 = 70 1 = 60 Drawings + = 100 √ = 80 - = 60 I = incomplete/no credit Any lab drawing, lab report/write-up not done will receive a zero. Missed labs can not be made up. Grades will be assigned according to the following scale A 90-100 B 80-89 C 70-79 D 60-69 F below 60 I Incomplete (see student handbook/college catalog for more details) W (must turn in an official withdrawal form by the cut off date) NA Not Attending (has missed 8 or more classes – regardless of class average) You are expected to keep all returned assignments until the end of the semester. Since this is the case, you are fully expected to be able to accurately keep track of your progress in the course and to calculate your own grade to date, using the assignment values provided above. I do not keep “running tabs” of grades, and will NOT do the math for you (see pre-requisites). 6 TENTATIVE SCHEDULE (subject to change as needed) Date 9/5 Topics Lecture:class policies; Introduction Lab: (lecture) Themes in the Study of Life Chapter 1 9/10 Lecture: The Chemical Context of Life Lab: Exercise #1 – Methods of Science 2 9/12 Lecture: Water and Life Lab: Exercise #4 – Laboratory Measurements 3 9/17 Lecture: Carbon and the Molecular Diversity of Life Lab: (lecture) The Structure and Function of Large Biological Molecules 4 5 9/19 Lecture: The Structure and Function of Large Biological Molecules cont Lab: Exercise #7 – Food Nutrient Analysis – lab report due 9/26 9/24 Lecture: A Tour of the Cell Lab: library orientation for scientific article assignment 9/26 Lecture: A Tour of the Cell cont Lab: Exercise #8 – Using the Microscope Exercise #9 – Microscopic Techniques Exercise #10 – Plant Cells – lab drawing 10/1 Exam #1 (chapters 1 – 6) 10/3 Lecture: Membrane Structure and Function Lab: Exercise #12 – Diffusion: Osmosis and Dialysis 7 10/8 Lecture: An Introduction to Metabolism Lab: Exercise #6 – Enzyme Activity – lab report due 10/15 8 10/10 Lecture: Cellular Respiration and Fermentation Lab: (lecture) 6 9 10/15 Lecture: Photosynthesis 10 Lab: Exercise #16 – Cell Respiration Exercise #14 – Separation of Leaf Pigments by Paper Chromatography – lab drawing 10/17 Lecture: The Cell Cycle Lab: (lecture) 12 10/22 Lecture: Meiosis and Sexual Life Cycle Lab: Exercise #17 – Cell Division – lab drawing 13 10/24 Lecture: (movie) “Why Sex?” 7 Date Topics Chapter 10/29 Exam #2 (chapters 7-10, 12-13) 10/31 Lecture: Mendel and the Gene Idea Lab: (lecture) 14 11/5 Lecture: The Chromosomal Basis of Inheritance Lab: Exercise #24 – Genetic Problems Exercise #22 – ABO Blood Typing – lab report due 11/12 15 11/7 Lecture: The Molecular Basis of Inheritance Lab: (lecture) 16 11/12 Lecture: From Gene to Protein Lab: Exercise #18 - Student Worksheet DNA, RNA, and Protein 17 11/14 Lecture: Descent with Modification: A Darwinian View of Life Lab: movie “Ghost in Your Genes” 22 11/19 Lecture: The Evolution of Populations Lab: Exercise #25 – A Simulation of Natural Selection 23 11/21 Lecture: The Origin of Species Lab: movie “Evolutionary Arms Race” 24 11/26 Exam #3 (chapters 14 – 17, 22 – 24) Scientific article paper due 12/3 Lecture: The History of Life on Earth Lab: (lecture) Viruses Exercise #27 – A Simulated Epidemic 25 19 12/5 Lecture: Phylogeny and the Tree of Life Lab: (lecture) Bacteria and Archae movie “Witches Curse” 26 27 12/10 Lecture: Protists Lab: Exercise #28 – Kingdom Protista – drawing 28 12/12 Lecture: Plant Diversity I: How Plants Colonized Land Plant Diversity II: The Evolution of Seed Plants Lab: Exercise #31 – Kingdom Plantae – drawing 29 30 12/17 Lecture: Fungi Lab: Exercise #29 – Kingdom Fungi – drawing 31 12/19 Cumulative Final Exam 8