CHAPTER 4 A TOUR OF THE CELL Sect. 4.2 Cell Size -Most cells are between 1 & 100um in diameter (Fig. 4.2A p. 54) -Plasma membrane (PM): selective barrier that consists of proteins & lipids (phospholipid bilayer) -Cell size is limited due to: -a single nucleus controlling the entire cell -enough surface area in relation to volume to obtain nutrients and dispose of wastes Sect. 4.3 • • • • Two Types of Cells Prokaryotic No membrane bound organelles, only nucleoid region Has ribosomes & DNA Cell wall, capsule & pili help attach, flagella Found in the Domains Bacteria & Archaea Eukaryotic • Have cytoplasm – region between the nucleus and the cell membrane (consists of a semifluid medium called cytosol) • Contain organelles – structures w/special functions • Found in protists, plants, fungi, and animals Sect. 4.5 The Nucleus (genetic control center of a eukaryotic cell) Nuclear Envelope -boundary around nucleus, separating it from the contents of the cytoplasm -Double membrane – each with a phospholipid bilayer Contents of the Nucleus - nearly all of the cell’s DNA is here (organized along w/proteins into chromosomes) - unless the cells are dividing, chromosomes are seen as a tangled up mess called chromatin - nucleolus functions in the synthesis of ribosomes Sect. 4.4 Ribosomes Function • assemble enzymes and the entire cell’s other proteins • there are genetic instructions for this to occur •not membrane bound Location • exist in 2 places w/in cytoplasm 1) free ribosomes - suspended in cytosol (make proteins for cell use) 2) bound ribosomes – attached to endoplasmic reticulum (make proteins for export outside cell) • ribosomes usually occur in clusters called polysomes Sect. 4.6 Endomembrane System Endoplasmic Reticulum (ER) • a network of interconnected compartments, continuous w/the outer membrane on the nuclear envelope p. 58 W/in the ER is a space known as the lumen Sect. 4.8 • 2 distinct regions of the ER (interconnected flattened sacs) Rough ER - has ribosomes on surface - makes proteins destined to be secreted - makes membranes Sect. 4.7 Smooth ER - lack ribosomes (p. 59), membrane is continuous w/rough ER - serves as a transition area for ER products - makes steroids and sex hormones - tolerance to drugs - calcium for muscles Sect. 4.9 Golgi Complex (p. 60) • after leaving the ER, most transport vesicles travel to this organelle •manufactures, warehouses, and ships (products of the ER are modified, stored, and shipped to other locations in transport vesicles) - consists of flattened sacs stacked up like pancakes (not connected) - molecules move from sac to sac Sect. 4.10 Lysosomes • membrane-bound bag of hydrolytic (digestive) enzymes - cell uses these enzymes to digest macromolecules - these enzymes work best at pH 5 • made by the rough ER, processed, and released by the Golgi • function by using phagocytosis (engulfs particles) then digests them • also function in recycling cell’s own organic material (recycling centers for damaged organelles) • ex: webbing between fingers in embryonic development Sect. 4.11 • lysosomal storage diseases (missing one of the hydrolytic enzymes): Pompe’s disease (liver can’t break down polysaccharide glycogen) Tay-Sachs (overload of lipids on nervous system) Microbodies • bounded by a single membrane • compartments specialized for specific metabolic pathways (each has a particular kind of enzymes) 2 kinds of microbodies: Peroxisomes - have enzymes which transfer H from various substrates to O (produce H2O2 as a byproduct) Glyoxysomes - contain enzymes to convert fats to sugar (in plants) Sect. 4.12 Vacuole • a large membrane sac • various functions: food vacuole - formed by phagocytosis contractile vacuole found in freshwater protists (pumps out excess water from the cell) Central vacuole - found in mature plant cells - bounded by a tonoplast (membrane) - stores organic compounds Sect. 4.14 Energy Transducers (have their own DNA) Chloroplasts • formed only in plants • functions in photosynthesis • chloroplast – contains a green pigment (chlorophyll) p. 63 • chloroplast’s elaborative structure: -consists of flattened green sacs which are stacked up -sacs called thylakoids -stack of thylakoids called a granum (if more than one granum, it’s called grana) -stroma: thick fluid surrounding thylakoids Sect. 4.15 Mitochondria (p. 63) • site for cellular respiration • found in plants and animals • these foldings divide inner region of mitochondria - intermembrane space – region between inner and outer membranes - has inner membrane that’s convoluted within foldings called cristae (this greatly increases surface area to enhance ATP production) - mitochondrial matrix – is enclosed by the inner membrane (most of the respiration takes place here) Sect. 4.16 Cytoskeleton – supportive meshwork of fine fibers for structural support Microfilaments (thinnest type of fiber) • solid rods of globular proteins called actin – linked in chains • best known for role in muscle contraction • protein called myosin is imbedded in the actin molecule • in plants, microfilaments are involved in cytoplasmic streaming (cytoplasm flows in a particular direction ex: moving chloroplasts) Intermediate Filaments - ropelike - reinforces cell shape - anchors certain organelles (nucleus is caged by these to keep in place) Microtubules p. 64 • hollow rods of globular proteins called tubulins • found in cytoplasm of all eukaryotic cells • radiate out from cell centers • give cell shape and reinforce it • help w/animal cell division • also help other organelles navigate through cytoplasm • w/in cell center are 2 centrioles – consist of 9 sets of triplet microtubules and must be 2 centrioles (a pair) in the center 9 sets p. 65 Fig. 4.17C Sect. 4.17 Cilia and Flagella Cilia – short fingerlike projections used for locomotion Flagellum – a whip-like tail • both have a core of microtubules and protrude from the cell • wrapped in plasma membrane • anchored to the cell by a basal body – similar to a centriole Ex: cilia on cells in wind pipe flagellum on sperm Sect. 4.18 Cell Surface Cell Wall • plants only - thicker than PM • there is a thin, flexible primary cell wall (between the 2 cell walls is the middle lamella - like glue) (pectin) • cell wall strengthens as the cell matures • some plants add a secondary cell wall between the PM and the primary cell wall • plants use the plasmodesmata - channels in the cell wall - strands of cytoplasm connect one cell to another Extracellular Matrix • no cell wall in animals • glycocalyx - fuzzy coat • made of carbohydrates and helps cells stick together - strong surfaces Intercellular Junctions • provides a means by which many cells can be integrated into one functional organism • cell to cell contact in animals provided by 3 junctions: 1. Tight junctions - binds cells together ex: digestive tract 2. Anchoring junctions - attach adjacent cells to each other to stretch ex: skin 3. Gap junctions - allow water and other small molecules to flow between neighboring cells (similar to plasmodesmata in plants)