A&P: The Cell The Plasma Membrane How was it discovered? http://ed.ted.com/lessons/insights-into-cellmembranes-via-dish-detergent-ethanperlstein#watch The Plasma Membrane What is the plasma membrane? • Flexible, sturdy barrier of the cell. • Fluid mosaic model: proteins float freely in sea of lipids. • Lipid bilayer: phospholipids, cholesterol, glycolipids. • Phospholipids are amphipathic (have both polar and nonpolar parts) • Fluidity depends on double bonds in lipids, and amount of cholesterol The Plasma Membrane What is it made of? • Integral proteins extend through membrane- nost are transmembrane (go all the way through) • Peripheral proteins are not firmly imbedded in membrane • Many of these proteins are glycoproteins (have carbohydrate groups) The Plasma Membrane What do the membrane proteins do? • Ion channels: pores which selectively allow ions in or out • Transporters: selectively move a substance in or out • Receptors: cell recognition site (binds to ligand) • Enzymes: catalyze reaction • Linkers: anchor to proteins inside or outside cell, or to proteins of neighbor cell • Cell Identity Marker- allows cells to recognize each other, tells identity. The Plasma Membrane Permeability • Permeability: the ability of substances to pass through • The plasma membrane is selectively permeable. • Permeable to nonpolar, uncharged molecules such as O2, CO2, steroids. • Impermeable to ions and large, uncharged polar molecules such as glucose. • Slightly permeable to small uncharged polar molecules such as water. The Plasma Membrane • Gradients • Concentration gradient: difference in concentration of a substance inside and outside the cell. • Substances will move from area of high concentration to low. • Electrical gradient: difference in electrical charge. The inner surface of the membrane is negatively charged, the outside is positive. • Positively charged substances will move toward negative area, and vice versa. Homework Read pages 60-65. Do page 65 #1-7 Article (Sleep deprivation) summary due Friday. Include in your summary a personal angle (personal story about sleep, how reading the article changed/may change your sleeping habits, etc) The Plasma Membrane https://www.youtube.com/watch?v=kfy92hd aAH0 The Plasma Membrane Passive Transport • no energy or ATP needed. • Substances move with gradient. • Osmosis, dialysis, facilitated difuusion are examples. • Facilitated diffusion involves proteins The Plasma Membrane Active Transport • Material is moved through the membrane using a protein carrier using ATP. • Examples: uptake of iodine into the thyroid, sodium/potassium pump. https://www.youtube.com/watch?v=P-imDC1txWw The Plasma Membrane Endocytosis • Endocytosis needs ATP, and brings materials in by forming vesicles around large particles. • A lysosome will join with the vesicle to break down the particles. • Phagocytosis is intake of solids. • Pinocytosis is intake of liquids. https://www.youtube.com/watch?v=-ZFnO5RY1cU https://www.youtube.com/watch?v=hacbn_xcZdU The Plasma Membrane Receptor mediated endocytosis • Receptor mediated endocytosis- molecules bind to receptors, a vesicle forms as the membrane sinks in • A lysosome joins with the vesicle, enzyme break down the substance so it can be absorbed. • The receptor returns to membrane. The Plasma Membrane Exocytosis Exocytosis releases materials from the cell. Secretory cells release enzymes, hormones, mucus. Nerve cells release neurotransmitters. http://science.education.nih.gov/supplements/nih2/addic tion/activities/lesson2_neurotransmission.htm The Plasma Membrane Homework: Read pages 69-74, do page 74 #12 and #15 Organelles and human disorders Tay-Sachs Disease • Inherited condition • Absence of Hex A (a lysosomal enzyme) • Hex A breaks down a membrane glycolipid found abundantly in nerve cells. • Effects: seizures, muscle rigidity, blindness, dementia, death http://vimeo.com/62446736 Lily Foundation Mitochondrial Disease Organelles and human disorders Mitochondrial Disease • Results from failures of the mitochondria. • Less energy is generated for the cell. • Cell injury or death occurs. • Organs and organ systems may fail. • Symptoms include loss of motor control, muscle weakness/pain, gastrointestinal disorders, poor growth, cardiac disease, liver disease, vision/hearing problems, developmental delays. https://www.youtube.com/watch?v=F8Xg8sO5AM&list=PLio7GaXoQ3Sg14ms4m2wKJNLtaw J-diBO The Triumphant Story of Sam Berns, Progeria Organelles and Human Disorders Progeria • Caused by a mutation for a protein (Lamin A) which is the structural scaffolding that holds the nucleus together. • This change in the protein makes the nucleus unstable, and leads to premature aging. • Symptoms include growth failure, loss of body fat and hair, stiffness of joints, heart disease/stroke. • Life expectancy is 14 years. https://www.youtube.com/watch?v=Twjg7v-pTO4 Current TV presents ‘Dying Young’ Organelles and human disorders Cystic Fibrosis • Defect in protein channels in the cell membrane leading from certain glands. • The channel transports Cl- into and out of cells, controlling the movement of water. • Water is needed to thin the mucus. • Thick mucus in the lungs, leading to infection. • Clogged pancreas, prevents digestive juices from reaching intestines. • Salty sweat. Continue the Tonicity Experiment Homework: Read pages 74-84. Complete worksheet (glue into notebook). Also make sure notebook is ready for check. Tonicity Lab is complete. Homework: Complete the lab write-up. It should include: • Introduction paragraph (you did this Friday) • Data tables • Conclusion paragraph Also: read pages 85-87, do page 86 #20-22 The nucleus The structure of the nucleus • Large and spherical • Most human cells have a single nucleus • Exceptions: mature blood cells have none, skeletal muscles have several. • Nuclear envelope is a double membrane to separate the nucleus from the cytoplasm The nucleus The structure of the nucleus • Nucleoli are clusters of protein, DNA, and RNA inside the nucleus. The control the creation of the ribosomes. • Nuclear pores are transmembrane proteins that control the movement of molecules in and out of the nucleus. The nucleus The function of the nucleus • Controls cellular structure and directs cellular function. • Genes contain instructions for the cell structure and function- located on chromosomes. • Chromosomes are made of chromatin- a complex of DNA, proteins, and RNA. http://www.dnalc.org/resources/3d/12-transcriptionbasic.html Transcription basic video The nucleus Transcription and Translation Transcription • DNA and RNA store information as sets of three nucleotides called codons. • RNA polymerase catalyzes transcription of DNA. • Three types of RNA are made from the DNA template: 1. Messenger RNA (mRNA)- directs the synthesis of a protein. 2. Ribosomal RNA (rRNA)- joins with ribosomal proteins to make ribosomes 3. Transfer RNA (tRNA)- involved in protein synthesis. http://www.dnalc.org/resources/3d/15-translationbasic.html\ Translation basic video The nucleus Transcription and Translation Translation • Ribosomes and tRNA use the sequence of the mRNA to assemble amino acids into proteins. • Steps: 1. Initiator tRNA with anticodon UAC attaches to the start codon AUG on the mRNA. 2. Large and small ribosomal subunits attach. 3. The next tRNA attaches to the next codon. 4. The large RNA subunit catalyzes the formation of a bond between the two amino acids. 5. The first tRNA detaches, the ribosome shifts down the mRNA. Steps 3-6 repeat. 6. Synthesis ends at the stop codon, the protein is freed and the ribosome detaches. https://www.youtube.com/watch?v=eWVuCDQKB5k https://www.youtube.com/watch?v=cZEPQ3kkwHo https://www.youtube.com/watch?v=LelFL9CrqQs Recombinant DNA Recombinant DNA Recombinants Genetic Engineering • DNA combined from different sources • Organisms with recombinant DNA • The manipulation of genetic material and creation of recombinants. • Medical uses: human proteins produced in bacteria in large quantities, then harvested and purified for distribution to patients. • Examples: human growth hormone, insulin, interferon, and erythropoietin Recombinant DNA Restriction enzymes • Molecular tool used to cut DNA- cuts the DNA at a specific point. • Examples: Eco RI, Bam HI • Some restriction enzymes create “sticky ends” • DNA can be inserted- like a puzzle piece. • DNA ligase ligates (“glues) the pieces together. • http://www.hhmi.org/biointeractive/geneticengineering Recombinant DNA How does the engineered DNA get into the bacteria? • Antibiotic sensitive bacteria are treated with CaCl2. • Engineered DNA (which has both the gene wanted and also a gene for antibiotic resistance) is added, taken in by bacteria • Bacteria are grown on media containing the appropriate antibiotic. • Only the bacteria with the engineered DNA will grow.