Cell Communication For cells to function in a biological system, they must communicate with other cells and respond to their external environment. Enduring understanding : Cells communicate by generating, transmitting and receiving chemical signals. Essential knowledge: 1. Cell communication processes share common features that reflect a shared evolutionary history. 2. Cells communicate with each other through direct contact with other cells or from a distance via chemical signaling. 3. Signal transduction pathways link signal reception with cellular response. 4. Changes in signal transduction pathways can alter cellular response. 5. Organisms respond to changes in their external environments. Chemical Signals…. • Can direct complex processes, ranging from cell and organ differentiation to whole organism physiological responses and behaviors. • Can allow cells to communicate without physical contact. • The distance between the signal generating cell(s) and the responding cell can be small or large. Methods of cell communication Three general methods of cell communication: 1.Diffusible chemical signals (messengers) that travel through the organism from one location to another (Close or long distances) 2.Physical contact between adjacent cell plasma membranes 3.Direct cytoplasmic contact via gap junctions CELL COMMUNICATION Part 1: An Overview of Cell Signaling 1.Cell signaling evolved early in the history of life 2.Communicating cells may be close together or far apart 3.The three stages of cell signaling are reception, transduction, and response Introduction • Cell-to-cell communication is absolutely essential for multicellular organisms. – coordinate the activities within individual cells that support the function of the organism as a whole. – Use of pheromones to trigger reproduction and developmental pathways • Important for many unicellular organisms. • • • • finding a mate population density (quorum sensing) Response to external signals by bacteria that influences cell allowed some organisms to evolve without having a nervous system. 1-Cell signaling evolved early in the history of life One topic of cell “conversation” is “mating”. – Ex: The yeast Saccharomyces cerevisiae, the yeast of bread, wine, and beer, identifies its mates by chemical signaling. – There are two sexes, a and alpha, each of which secretes a specific signaling molecule, a factor and alpha factor respectively. – These factors each bind to receptor proteins on the other mating type. Cell signaling has remained important in the microbial world. – Myxobacteria, soil-dwelling bacteria, use chemical signals to communicate nutrient availability. – When food is scarce, cells secrete a signal to other cells leading them to aggregate and form thick-walled spores. 2-Communicating cells may be close together (LOCAL) or far apart Local signaling Target cell Secretory vesicle Local regulator diffuses through extracellular fluid (a) Paracrine signaling. A secreting cell acts on nearby target cells by discharging molecules of a local regulator (a growth factor, for example) into the extracellular fluid. Electrical signal along nerve cell triggers release of neurotransmitter Neurotransmitter diffuses across synapse Target cell is stimulated (b) Synaptic signaling. A nerve cell releases neurotransmitter molecules into a synapse, stimulating the target cell. Example of Localized signaling Local signaling c. In synaptic signaling, a nerve cell produces the neurotransmitter that diffuses to a single cell that is almost touching the sender. –An electrical signal passing along the nerve cell triggers secretion of the neurotransmitter into the synapse. Local signaling d. Contact dependent Touching *Plasmodesmata •Narrow channels between plant cells •A narrow tube of Endoplasmic reticulum. •Material exchange *Gap Junctions •Narrow tunnels between animal cells that consist of proteins called connexons. •Allows the movement of ions and small molecules from cell to cell. Local signaling d. Contact dependent – Signaling substances dissolved in the cytosol pass freely between adjacent cells. Touching Clip; Start at 5:30 Long-Distance Signaling • Endocrine (hormone) signaling – Specialized cells release hormone molecules, which travel (usually by diffusion through cells or through the circulatory system) to target cells elsewhere in the organism Hormone Control Clip Long-Distance Signaling • Plants also use hormones to signal at long distances. -In plants, hormones may travel in vessels, but more often travel from cell to cell (auxin) or by diffusion in air (Ethylene). -Ethylene gas in fruit ripening 3. The three stages of cell signaling: reception, transduction, & response McGraw-Hill Dehydration Response Example Clip EK: Signal transduction pathways link signal reception with cellular response. The three stages of cell signaling CELL COMMUNICATION Part 2: Signal Reception and the Initiation of Transduction Step #1: In reception, a chemical signal binds to a cellular protein, typically at the cell’s surface. A signal molecule (ligand), binds to a receptor protein, causing the protein to change shape Step 1. A signal molecule binds to a receptor protein causing the protein to change shape • Receptor protein recognizes the signal molecule (ligand). – Recognition: receptor on target cell is complementary in shape. – The ligand attaches to the receptor protein, the receptor typically undergoes a change in shape. 1. This may activate the receptor so that it can interact w/other molecules inside the cell. 2. Can lead to the aggregation of receptors. **Signal molecule does not enter cell.*** Most signal receptors are plasma membrane proteins Most signal molecules are water-soluble and too large to pass through the plasma membrane. Three major types of receptors: 1. G-protein-linked receptors – short for guanine nucleotide binding proteins 2. Tyrosine-kinase receptors 3. Ion-channel receptors • PROJECTS START HERE G protein-linked receptors 1. G-protein-linked receptors consists of a receptor protein associated with a Gprotein on the cytoplasmic side. – The receptor consists of seven alpha helices spanning the membrane. – Effective signal molecules include yeast mating factors, epinephrine, other hormones, and neurotransmitters. GGprotein-coupled protein-linked receptors receptors An example of a G protein-linked receptor is the epinephrine receptor. Epinephrine stimulates glycogen breakdown G-protein-linked receptors and G-proteins mediate a host of critical metabolic and developmental processes (e.g., blood vessel growth and development). G protein-linked receptors •Uses the exchange of Guanosine diphosphate (GDP) for Guanosine triphosphate (GTP) as a molecular "switch" to allow or inhibit biochemical reactions inside the cell G proteincoupled receptors Large family all with 7 membranespanning regions Receptor Receptor Ion channel G protein Second messenger Effector enzyme Precursor coupled to G protein, and G protein stimulates effector (enzyme that promotes formation of intracellular “second messenger”) Guanosine triphosphate The G-protein system cycles between on & off. 1. When a G-protein-linked receptor is activated by binding with an extracellular signal molecule, the receptor binds to an inactive G protein in membrane. 2. This leads the G protein to substitute GTP for GDP. 3. The G protein then binds with another membrane protein, often an enzyme, altering its activity and leading to a cellular response. The whole system can be shut down quickly when the extracellular signal molecule is no longer present. G-Protein receptors: • Diseases such as diabetes and certain forms of pituitary cancer, among many others, are thought to have some root in the malfunction of G proteins • G-protein receptor systems are extremely widespread and diverse in their functions. – They play an important role during embryonic development and sensory systems. Ion-Channel receptors Ligand binding changes confirmation of the receptor so that specific ions can flow through it Ion movement alters the electric potential across the plasma membrane found in high numbers on neuron plasma membranes ligand-gated channels for sodium and potassium Also found on the plasma membrane of muscle cells binding of acetylcholine results in ion movement and eventual contraction of muscle Extracellular side Closed Open Binding Cytoplasmic side 3.Ligand-gated ion channels: protein pores that open or close in response to a chemical signal. – This allows or blocks ion flow, such as Na+ or Ca2+. – Binding by a ligand to the extracellular side changes the protein’s shape and opens the channel. – Ion flow changes the concentration inside the cell. – When the ligand dissociates, the channel closes. • Ligand-gated ion channels are very important in the nervous system. – EX: binding of a neurotransmitter to a neuron, allowing the inward flow of Na2+ that leads to the depolarization of the neuron and the propagation of a nervous impulse to adjacent cells. This colored scanning electron micrograph shows the synapses, or connections, between two nerve fibers (in purple) and a nerve cell (yellow). The picture is magnified 10,000 times. Way Cool Alert! •Normally, the enzyme acetylcholinesterase converts acetylcholine into the inactive metabolites choline and acetate. •The devastating effects of nerve agents (Sarin gas for example) are due to their inhibition of this enzyme, resulting in continuous stimulation of the muscles, glands and central nervous system. •Botulinus toxin is produced by the anerobic bacillus Clostridium botulinum, which may be found in improperly canned food, and is one of the most potent toxins known. •This toxin (the agent responsible for botulism) blocks the release of vesicles. This, of course, leads to muscle paralysis and, if the diaphragm becomes affected, can be fatal. Tyrosine Kinase-linked receptors Activation: **Aggregation then phosphorylation Ligand binding results in the formation of a receptor dimer (2 receptors) The dimer then activates a class of protein called tyrosine kinases This activation results in the phosphorylation of downstream targets by these tyrosine kinases (stick phosphate groups onto tyrosines within the target protein) Protein Kinases= general name for an enzyme that transfers PO4- groups from ATP to a protein An individual tyrosine-kinase receptor consists of several parts: – an extracellular signal-binding sites – a single alpha helix spanning the membrane, and – an intracellular tail with several tyrosines. • When ligands bind to two receptor polypeptides, the polypeptides aggregate, forming a dimer. • This activates the tyrosinekinase section of both. • These add phosphates to the tyrosine tails of the other polypeptide. • The fully-activated receptor proteins activate a variety of specific relay proteins that bind to specific phosphorylated tyrosine molecules. – One tyrosine-kinase receptor dimer may activate ten or more different intracellular proteins simultaneously. • These activated relay proteins trigger many different transduction pathways and responses. The tyrosine-kinase receptor system is especially effective when the cell needs to regulate and coordinate a variety of activities and trigger several signal pathways at once. – Extracellular growth factors often bind to tyrosinekinase receptors. Signal-binding sitea Signal molecule Signal molecule Helix in the Membrane Tyrosines Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Tyr Receptor tyrosine kinase proteins (inactive monomers) CYTOPLASM Dimer Activated relay proteins P Tyr Tyr P Tyr P P Tyr Tyr P Tyr P P Tyr Tyr P Tyr Tyr P Tyr Tyr P Tyr Tyr P Tyr Tyr Tyr P Tyr 6 Activated tyrosinekinase regions (unphosphorylated dimer) ATP 6 ADP Fully activated receptor tyrosine-kinase (phosphorylated dimer) Inactive relay proteins Cellular response 1 Cellular response 2 Insulin (Click) Polypeptide hormone that regulates carbohydrate metabolism. • PROJECTS END HERE Step #1 Continued: Communication through diffusion- intracellular receptors • Some signal receptors are dissolved in the cytosol or nucleus of target cells. • The ligands pass through the plasma membrane. Hormone (testosterone) EXTRACELLULAR FLUID Plasma membrane Receptor protein Hormonereceptor complex • Include the hydrophobic steroid and thyroid hormones of animals. DNA mRNA NUCLEUS CYTOPLASM New protein Action of Lipid-Soluble Hormones (steps) 1. Hormone diffuses through phospholipid bilayer & into cell 2. (Step #1) Binds to an intercellular receptor turning on/off specific genes 3. (Step #3-response) Causing the synthesis of new proteins 4. New proteins alters cell’s activity • Testosterone, like EXAMPLE other hormones, travels through the blood and enters cells throughout the body. • In the cytosol, they bind and activate receptor proteins. • These activated proteins enter the nucleus and turn on genes that control male sex characteristics. • These activated proteins act as transcription factors. – Transcription factors control which genes are turned on which genes get transcribed into messenger RNA (mRNA). • The mRNA molecules leave the nucleus and carry information that directs the synthesis (translation) of specific proteins at the ribosome. Part 3: Signal-Transduction Pathways Step #2. In transduction, binding leads to a change in the receptor that triggers a series of changes along a signaltransduction pathway. Pathways relay signals from receptors to cellular responses-Usually a multi-step pathway Amplification (small number of signal molecules can produce a large cellular response) Protein phosphorylation, a common mode of regulation in cells, is a major mechanism of signal transduction Certain small molecules and ions are key components of signaling pathways (second messengers-cAMP, Ca2+,IP3, GMP ) Insulin Signaling Clip Mr. Anderson: Signal Transduction Pathways Pathways relay signals from receptors to cellular responses • Pathway acts like falling dominoes. – The signal-activated receptor activates another protein, which activates another and so on, until the protein that produces the final cellular response is activated. • The original signal molecule is not passed along the pathway and may not even enter the cell. – Its information is passed on. Protein phosphorylation is a major mechanism of signal transduction • The phosphorylation of proteins by a specific enzyme (a protein kinase) is a widespread cellular mechanism for regulating protein activity. – Most protein kinases act on other substrate proteins, unlike the tyrosine kinases that act on themselves. phosphorylation dephosphorylation **Phosphorylation is the addition of a phosphate (PO4) group to a protein or a small molecule **Many enzymes and receptors are switched "on" or "off" by phosphorylation and dephosphorylation. • Phosphorylation of a protein typically converts it from an inactive form to an active form. ON protein kinase phosphorylation – The reverse (inactivation) is possible too for some proteins. • A single cell may have hundreds of different protein kinases, each specific for a different substrate protein. – Fully 1% of our genes may code for protein kinases. • Abnormal activity of protein kinases can cause abnormal cell growth and contribute to the development of cancer. dephosphorylation protein phosphatases OFF • Turning off a signaltransduction pathway protein phosphatases. ON phosphorylation – Rapidly remove phosphate groups from proteins. • When an extracellular signal molecule is absent, active phosphatase molecules predominate, and the signaling pathway and cellular response are shut down. dephosphorylation OFF Certain signal molecules and ions are key components of signaling pathways (second messengers- cAMP, Ca2+,IP3, GMP ) • Many signaling pathways involve small, nonprotein, water-soluble molecules or ions, called second messengers. – These molecules rapidly diffuse throughout the cell. – Two of the most important 2nd messangers are cAMP and Ca2+. – Inositol triphosphate (IP3) & GMP are others •Binding by epinephrine leads to increases the concentration of cyclic AMP or cAMP. – This occurs because the receptor activates adenylyl cyclase, which converts ATP to cAMP. – cAMP is short-lived as phosphodiesterase converts it to AMP. McGraw-Hill Animation Epinephrine stimulates glycogen breakdown in cAMP cAMP: -Main purpose: activation of protein kinases. -also used to regulate the passage of Ca2+ through ion channels. Receptor Gs cAM P cAMP Adenylyl cyclase AT P Activate protein kinase (phosphorylate protein) (dephosphorylate b phosphoprotein phosphatase) Biological response cAMP is synthesised from ATP by adenylyl cyclase. Adenylate cyclase is located at the cell membranes. It is activated by the hormones glucagon (does the opposite of insulin) and adrenaline and by G protein cAMP controls many biological processes, including glycogen decomposition into glucose (glycogenolysis), and lipolysis In response to a signal, a cell may regulate activities in the cytoplasm or transcription in the nucleus • Ultimately, a signal-transduction pathway leads to the regulation of one or more cellular activities. – This may be a change in an ion channel or a change in cell metabolism. – EX:, epinephrine activates enzymes that catalyze the breakdown of glycogen. Secondary messengers clip- click • Hormones and other signals can trigger the formation of cAMP. cAMP – Binding by the signal to a receptor activates a G protein that activates adenylyl cyclase in the plasma membrane. –The cAMP from the adenylyl cyclase diffuses through the cell and activates a serine/threonine kinase, called protein kinase A which phosphorylates other proteins. • Certain microbes cause disease by disrupting the Gprotein signaling pathways. cAMP – The cholera bacterium, colonizes the small intestine and produces a toxin that modifies a G protein that regulates salt and water secretion. – The modified G protein is stuck in its active form, continuously stimulating productions of cAMP. – This causes the intestinal cells to secrete large amounts of water and salts into the intestines, leading to profuse diarrhea and death if untreated. The toxin acts as an enzyme that changes the G protein so that it can no longer switch itself off •Ca Many signal molecules in animals induce responses in their target cells via signal-transduction pathways that increase the cytosolic concentration of Ca2+. 2+ – In animal cells, increases in Ca2+ may cause contraction of muscle cells, secretion of some substances, and cell division. – In plant cells, increases in Ca2+ trigger responses for coping with environmental stress, including drought. • Cells use Ca2+ as a second messenger in both G-protein pathways and tyrosine-kinase pathways. Ca2+. Other secondary messengers: inositol triphosphate (IP3)- -stimulates the release of calcium ions from the smooth endoplasmic reticulum 1 2 A signal molecule binds to a receptor, leading to activation of phospholipase C. EXTRACELLULAR FLUID 3 DAG functions as a second messenger in other pathways. Phospholipase C cleaves a plasma membrane phospholipid called PIP2 into DAG and IP3. Signal molecule (first messenger) G protein DAG GTP G-protein-linked receptor PIP2 Phospholipase C IP3 (second messenger) Skip…Should beIPin-gated student projects 3 calcium channel Endoplasmic reticulum (ER) Ca2+ Ca2+ (second messenger) 4 IP3 quickly diffuses through the cytosol and binds to an IP3– gated calcium channel in the ER membrane, causing it to open. 5 Calcium ions flow out of the ER (down their concentration gradient), raising the Ca2+ level in the cytosol. Various proteins activated Cellular response 6 The calcium ions activate the next protein in one or more signaling pathways. CELL COMMUNICATION Part 4: Cellular Responses (step#3) to Signals • In response to a signal, a cell may regulate activities in the cytoplasm or transcription in the nucleus • Elaborate pathways amplify and specify the cell’s response to signals • The stimulation of glycogen breakdown by epinephrine involves a G-proteinlinked receptor, a G Protein adenylyl cyclase and cAMP, and Notice: The cascading and several protein amplifying effect… kinases before glycogen phosphorylase is activated. • Other signaling pathways do not regulate the activity of enzymes but the synthesis of enzymes or other proteins. • Activated receptors may act as transcription factors that turn specific genes on or off in the nucleus. Pathways amplify and specify the cell’s response to signals • Pathways with multiple steps have 2 benefits. 1. They amplify the response to a signal. • At each catalytic step in a cascade, the number of activated products is much greater than in the preceding step. – In the epinephrine-triggered pathway, binding by a small number of epinephrine molecules can lead to the release of hundreds of millions of glucose molecules. 2. They contribute to the specificity of the response. • Various types of cells may receive the same signal but produce very different click responses. – For example, epinephrine triggers liver or striated muscle cells to break down glycogen, but cardiac muscle cells are stimulated to contract, leading to a rapid heartbeat. • These differences result from a basic observation: – Different kinds of cells have different collections of proteins. • STRUCTURE AND FUNCTION. • The response of a particular cell to a signal depends on its particular collection of receptor proteins, relay proteins, and proteins needed to carry out the response. • As important as activating mechanisms are, we must say something about inactivating mechanisms. 1. For a cell to remain alert and capable of responding to incoming signals, each molecular change in its signaling pathways must last only a short time. • If signaling pathway components become locked into one state, the proper function of the cell can be disrupted. 2. Binding of signal molecules to receptors must be reversible, allowing the receptors to return to their inactive state when the signal is released. • Similarly, activated signals (cAMP and phosphorylated proteins) must be inactivated by appropriate enzymes to prepare the cell for a fresh signal. Extracellular Signaling Review 1. 2. 3. 4. 5. 6. Signaling molecules are released by signaling cells The signal is called the ligand The ligand binds to its specific receptor on a target cell This ligand-receptor interaction induces a conformational or shape-change in the receptor Produces a specific response - called the cellular response Can include a vast array of compounds e.g. small amino acid derivatives, small peptides, proteins Cell-to-cell communication by extracellular signaling usually involves six steps • • • • (1) synthesis of the signaling molecule by the signaling cell (2) release of the signaling molecule by the signaling cell (3) transport of the signal to the target cell (4) detection of the signal by a specific receptor protein – receptor-ligand specificity • (5) a change in cellular metabolism, function, or development = cellular response – triggered by the receptor-ligand complex – specific to the ligandreceptor complex • (6) removal of the signal, which usually terminates the cellular response – degredation of ligand