4. NOMENCLATURE AND CONFORMATIONS OF ALKANES AND CYCLOALKANES. (approx. lecture time: 4 hr) Topics covered: 4.1-4.17. Hydrocarbons from Petroleum The Unbranched Alkanes Nomenclature 1o (primary) hydrogens also known as methyl hydrogens 2o (secondary) hydrogens also known as methylene hydrogens 3o (tertiary) hydrogens also known as methine hydrogens (Hydrogens on CH4 or NH4+ are called quaternary hydrogens) Simplified IUPAC Nomenclature Rules 1. 2. 3. 4. 5. Locate longest alkyl chain. The length of this chain determines the parent name. If there are chains of equal length, choose the one with larger number of substituents (avoids complex substituents) Number the chain beginning at end closer to the first substituent. If there is a tie, begin numbering at the end closer to the second substituent. Substituent names are placed in alphabetical order (ignore prefixes such as di, tri, tetra, sec & tert, etc. BUT NOT cyclo and iso). The final name has no spaces between words. Commas and hyphens are used between “words”. Alkyl Halides and Alcohols Cycloalkanes (lower set of numbers in 1,3 vs 1,5) (lower set of numbers in 1,2,4 vs 1,3,4) (Here, the alcohol takes precedence and numbering starts there) Bicyclic Compounds Start numbering at the bridgehead and go around the longest bridge first Alkenes For simple cyclic alkenes (no alcohol function), the alkene must be contained in the numbers “1,2” The presence of the alcohol takes precedence. Start numbering here. Alkynes and Enynes Numbering enynes (ene and yne): start from the end closer to the first multiple bond. If there is a tie, give the alkene the lower number Conformational Analysis of Ethane Energy Diagram for C-C Bond Rotation Conformational Analysis of Butane Energy Diagram for C-C Bond Rotation Strain Energies Interaction Eclipsing H Eclipsing H and CH3 Eclipsing CH3 Gauche CH3 Cause Torsional strain Mostly torsional strain Torsional and steric Steric Energy 4.0 kJ/mol 6.0 11 4 Torsional strain: due to unfavourable “eclipsing” orbital interactions Steric strain: due to “crowding” of atomic nuclei The Zig-Zag Structure of Linear Alkanes Why do we draw alkanes in a zig-zag manner? What’s in common in these compounds? cyclohexane Diamond Dodecahedrane (Hint: JRR Tolkien's first book of his famous trilogy) Lord of the Rings Lord of the Rings in Middle Earth. The bearer has immense power, but it’s all fantasy. Cyclohexane, the true Lord of the Rings (in organic chemistry; mastering it will give you great power indeed!) The Cycloalkanes [109o is the perfect tetrahedral angle (sp3 hybrid)] Rings have angle strain, in addition to torsion and steric strains Angle Strain: due to expansion or compression of required bond angles. Torsional strain: due to unfavourable eclipsing interactions of bonding electrons. Steric strain: due to repulsive interactions of atoms in close proximity. The True Shapes of Cycloalkanes “flat” “bent” “envelope” “chair” Total Strain Energy vs Ring Size Cycloalkane Total Strain Cyclopropane 115 kJ/mol Cyclobutane 110 Cyclopentane 25 Cyclohexane 0 Cycloheptane 24 Cyclooctane 40 Cyclononane 53 Conformational Analysis of Cyclohexane model from your molecular model set space filling model 4 1 Chair and Boat Conformations chair (lowest energy form) boat (A high energy form) The Cyclohexane Ring Flip Energy Level Diagram for Cyclohexane Ring Flip (For information only. Do not memorize!) Conformational Analysis for Methylcyclohexane 1,3-diaxial interactions 1,3-Dixial Interactions are Gauche Interactions 1,4-Dimethyl Cyclohexanes 1,2-Dimethyl Cyclohexanes Importance of 3-D Structures Controlling and understanding the 3-D shapes of organic molecules are essential for designing molecules that will function in desired ways. Chemical information is “stored” and “transferred” by the 3-D shapes of organic molecules. The Decalins “flexible” “rigid” (more stable) Synthesis of Alkanes: Hydrogenation of Alkenes and Alkynes The Importance of Rings (The Steriods) Cholesterol is a waxy steroid found in the cell membranes. It is an essential component of mammalian cell membranes. Corticosteroids: metabolism & immune function Anabolic Steroids: muscle & bone growth Sex Steroids: human reproduction An Infinite Array of Cyclohexane Rings (minus the hydrogens) Diamond