BON-10553; No. of pages: 9; 4C: Bone xxx (2014) xxx–xxx Contents lists available at ScienceDirect Bone j o u r n a l h o m e p a g e : w w w. e l s e v i e r. c o m / l o c a t e / b o n e 1 2 3 Original Full Length Article MicroRNA-20a regulates autophagy related protein-ATG16L1 in hypoxia-induced osteoclast differentiation Q54Q4 Kuo-Ting 5 6 7 8 9 10 11 12 a Sun a,b,c, Michael Y.C. Chen c,d, Ming-Gene Tu c, I-Kuan Wang a,e, Shih-Sheng Chang a,f, Chi-Yuan Li a,g,⁎ Graduate Institute of Clinical Medical Science, China Medical University, No. 91 Hsueh-Shih Rd., Taichung, Taiwan b Department of Pediatric Dentistry, China Medical University Hospital, No. 2 Yu-Der Rd., Taichung, Taiwan c School of Dentistry, China Medical University, No. 91 Hsueh-Shih Rd., Taichung, Taiwan d Department of Oral & Maxillofacial Surgeon, China Medical University Hospital, No. 2 Yu-Der Rd., Taichung, Taiwan e Division of Nephrology, Department of medicine, China Medical University Hospital, No. 2 Yu-Der Rd., Taichung, Taiwan f Division of Cardiology, Department of medicine, China Medical University Hospital, No. 2 Yu-Der Rd., Taichung, Taiwan g Department of Anesthesiology, China Medical University Hospital, No. 2 Yu-Der Rd., Taichung, Taiwan article info abstract 13 Article history: Autophagy and autophagy-related proteins (ATGs) play decisive roles in osteoclast differentiation. Emerging 27 14 Received 8 October 2014 15 Revised 25 November 2014 19 Edited by Hong-Hee Kim lines of evidence show the deregulation of miRNA in autophagic responses. However, the role of hypoxia and in- Q728 volvement of miRNA in osteoclast differentiation are unclear. In the present study, we demonstrate that hypoxia 29 16 Accepted 29 November 2014 caused induction of autophagy and osteoclast differentiation markers in RAW264.7 cells stimulated with M-CSF 30 17 Available online xxxx and RANKL. In addition, miR-20a was significantly repressed during hypoxia and identified as the prime candi- 31 18 UNCORRECTED PROOF date involved in hypoxia-induced osteoclast differentiation. The results from dual luciferase reporter assay re- 32 vealed that miR-20a directly targets Atg16l1 by binding to its 3′UTR end. Further, miR-20a transfection studies 33 20 Keywords: showed significant down regulation of autophagic proteins (LC3-II and ATG16L1) and osteoclast differentiation 34 21 Osteoclast markers (Nfatc1, Traf6, and Trap) thus confirming the functional role of miR-20a under hypoxic conditions. Re- 35 22 Autophagy sults of chromatin immunoprecipitation assay showed that HIF-1α binds to miRNA-20a. From miRNA Q-PCR re- 36 Hypoxia sults, we confirmed that shRNA HIF-1α knockdown significantly downregulated both autophagy (LC3, p62, Atg5, 37 23 24 HIF-1α Atg12, Atg16l1, Atg7, Becn1, Atg9a) and osteoclast markers (Traf6, Nfatc1, Ctsk, cFos, Mmp9, Trap) in RAW264.7 38 microRNAs findings suggest that the regulatory axis of HIF- 1α-miRNA-20a-Atg16l1 might be a critical mech- 25 39 Periodontal disease 40 41 4523 44 cells. Thus, our 26 anism for hypoxia-induced osteoclast differentiation. © 2014 Published by Elsevier Inc. 46 1. Introduction autophagosome formation [3]. Studies confirm that deletion of autoph- 61 agic proteins such as ATG5 and ATG7 was found to impair the ruffled 62 47 Bone homeostasis is a dynamic process involving a delicate balance border of osteoclasts and reduce osteoclastic bone resorption [4]. Au- 63 between formation and resorption. The osteoclasts and osteoblasts are tophagy and ATGs play a critical role in osteoclast differentiation. 64 49 the major cells involved in bone remodeling [1]. However, when this Thus, regulation of osteoclast differentiation can be achieved by 65 50 balance shifts towards increased osteoclast activity, it ultimately results targeting autophagy. So, it is important to understand these intriguing 66 51 in bone loss leading to bone-related inflammatory diseases such as peri- mechanisms to develop potential strategies against bone-related in- 67 52 odontal disease, rheumatoid arthritis and osteoporosis [2]. Bone- flammatory diseases. 68 53 resorbing osteoclasts are multinuclear giant cells, which are derived MiRNAs are a novel class of small, single-stranded non-coding RNAs 69 54 from hematopoietic cells of the monocyte/macrophage lineage in the that post-transcriptionally regulate gene expression via mRNA degrada- 70 55 presence of RANKL (receptor activator of NF-kB ligand) and M-CSF tion or translational inhibition of protein synthesis. Recent studies sug- 71 56 (macrophage colony stimulating factor) [1]. Initiation and progression gested that miRNAs participated in osteoclast differentiation [5]. MiR- 72 57 of osteoclast differentiation of hematopoietic cells are manipulated 223 is highly expressed in rheumatoid arthritis synovium, and over ex- 73 58 by genetic and epigenetic mechanisms. Autophagy is the principal pression of miR-223 could suppress osteoclastogenesis [6]. MiR-503 74 59 catabolism for degradation of dysfunctional cellular components. was shown to inhibit receptor activator of RANKL-induced osteoclasto- 75 48 Please cite this article as: Sun K-T, et al, MicroRNA-20a regulates autophagy related protein-ATG16L1 in hypoxia-induced osteoclast differentiation, Bone (2014), http://dx.doi.org/10.1016/j.bone.2014.11.026 2 60 K.-T. Sun et al. / Bone xxx (2014) xxx–xxx The autophagy-related proteins (ATGs) are known to engage in genesis in CD14(+) peripheral blood mononuclear cells [7]. MiR-124 76 regulates proliferation and motility of osteoclast precursor macro- 77 phages by suppressing nuclear factor of activated T-cells, cytoplasmic, 78 ⁎ Corresponding author at: Graduate Institute of Clinical Medical Science, China Medical Q6 calcineurin-dependent 1 (NFATc1) expression [8]. MiR-21, -29b, -146a 79 and -210 all were proved to participate in the differentiation of 80 University, No. 91 Hsueh-Shih Rd., Taichung, Taiwan. Fax: +886 4 22333710. E-mail address: cyli168@gmail.com (C.-Y. Li). http://dx.doi.org/10.1016/j.bone.2014.11.026 8756-3282/© 2014 Published by Elsevier Inc. 81 RAW264.7 cells to osteoclast-like cells after treatment with TNF-α/ for 6 days. Cells (1 × 105) were seeded onto 10-cm2 dishes for western 139 82 RANKL [9]. Taken together, miRNAs are involved in regulation of osteo- blot, real-time PCR analysis, reporter gene assay and mimic transfection. 140 83 clast differentiation. 84 Hypoxia acts as a stimulator of osteoclast formation and bone re- 2.4. TRAP (Tartrate Resistant Acid Phosphatase) staining 141 85 sorption [10,11]. Autophagy and ATGs may mediate osteoclast differen86 tiation induced by hypoxia through hypoxia-inducible factor 1-alpha Important characteristic feature and markers for the identification of 142 87 (HIF-1α)/BCL2/adenovirus E1B 19kd-interacting protein 3 (BNIP3) OC differentiation include TRAP expression and the presence of multi- 143 88 pathway [12]. More recent research shows miRNA as key regulators in nucleus [12]. Briefly, after respective treatment schedule, the cells 144 89 autophagy [13,14]. However, the role of miRNAs on autophagy during were treated with TrypLE™ and fixed with 3.8% paraformaldehyde for 145 90 hypoxia and its subsequent impact on hypoxia-induced osteoclast 10 min followed by ethanol/acetone (1:1) fixation for 1 min. Post- 146 91 differentiation has not been explored. The present study was de- fixation, the cells were stained with TRAP staining solution for 1 h at 147 92 signed to investigate whether and how miRNAs serve an important 37 °C and observed under a NIKONT100 inverted contrasting micro- 148 93 role in autophagy mediating osteoclast differentiation under hypox- scope. TRAP positive cells with more than 3 nuclei were counted as ma- 149 94 95 96 97 98 99 ia circumstances. ture osteoclasts. 5 random fields were selected and counted for mature 150 osteoclasts and their average is represented as OCs/field. 2. Materials and methods 2.5. Prediction of miRNA target genes 2.1. Reagents 151 152 The miRWalk database was used to predict the binding site on the 3′ 153 Recombinant human soluble RANKL and M-CSF were purchased UTR of Atg16l1 gene; this database combines several bioinformatic plat- 154 from PeproTech (Rocky Hill, NJ). Dharmacon miR-20a miRNAmimics, forms including TargetScan 4.2 (http://targetscan.org), miRBase, 155 anti-miR-20a miRNA inhibitors (AntagomiR) and Scramble were pur- RNA22, DIANA-mT, miRDB, PICTAR5, PITA, and miRanda. 156 100 chased from Dharmacon (Denver, CO). Roche UPL microRNA assay for 101 mmu-mir-20a, miRNA reverse transcription kit and universal PCR mas- 2.6. Construction of miRNAs and reporter vectors 157 102 ter mix was purchased from Roche (Welwyn Garden City, UK). TrypLE™, Lipofectamine 2000 transfection reagents were from Life miRNAs and reporter gene construction was performed as described 158 104 Technologies (Carlsbad, CA). ChIP assay kit was purchased from previously [15,16]. Genomic fragments of miR-20a precursors were am- 159 105 Millipore (Darmstadt, Germany). IgG or anti-HIF-1α antibody from plified by PCR using mouse genomic DNA as a template (the PCR 160 106 Novus Biologicals (Southpark Way, USA). pmirGLO luciferase vector primers are listed as Supplementary data—Table 1). The PCR products 161 107 from Promega (Madison, WI). Trizol Reagent, random hexamer primers, were cloned into the pLAS2-RFP vector at restriction sites NotI and 162 108 First Strand Buffer, RNaseOUT, dithiothreitol, MMLV Reverse Transcrip- XhoI. RAW264.7 cells were virally infected with the miRNAs, the ex- 163 109 tase, FITC and HRP-conjugated goat anti-rabbit IgG from Invitrogen 110 (Carlsbad, CA). 111 ATG16L1 (NB110-60928), p62 (NBP1-48320SS) and ATG5 (NBP110- target genes and the entire Atg16l1 3′UTR sequence was cloned into 166 112 87318) were procured from Novus Biologicals (Southpark Way, USA). the pmirGLO luciferase vector at restriction sites PmeI and XhoI. Muta- 167 113 Anti β-actin (AC-74) antibody was from Sigma (St. Louis, MO). All 114 other chemicals were purchased from Sigma (St. Louis, MO). tant constructs of the Atg16l1 3′UTR were generated by a pair of 169 primers containing the mutant Primary antibodies against LC3 NCORRECTED PROOF 103 pressions of which were then detected with the aid of quantitative 164 (NB100-2220), PCR (Q-PCR) (ABI Step-One Plus). The binding site for miR-20a in the 165 tion constructs were performed as described previously [17]. The mu- 168 sequence. 170 115 2.2. Cell culture and treatments 116 RAW264.7 mouse macrophage cells were purchased from American 117 Type Culture Collection (ATCC-TIB71). The cells were grown in 118 Dulbecco's modified eagle's medium (Gibco, Invitrogen) supplemented agent (Invitrogen) according to the manufacturer's instructions, and 173 119 with 10% fetal bovine serum (FBS) and 1% penicillin/streptomycin. Cells 120 were used at 5 to 10 passages. Cells were seeded 24 h before the treat- trophotometer (Thermo Scientific Waltham, MA,). For reverse tran- 175 121 ment. Cells in α-minimal essential medium supplemented with 10% FBS 122 123 and 1% penicillin/streptomycin were exposed to normoxia (20% O2) or 10 ml of ultrapure water (free of DNase and RNase); 1 μl of 50 mM ran- 177 hypoxia (0.3% O2) in the presence of 100 ng/ml RANKL and 20 ng/ml dom hexamer primers was added. The solution was denatured at 65 °C 178 124 M-CSF for 24 h and were used for determination of autophagy and oste- 2.7. Reverse transcription of RNA and Q-PCR Total RNA was extracted from the RAW264.7 cells with Trizol Re- 172 the RNA concentration was determined using a NanoDrop 2000 spec- 174 scription of RNA to first-strand cDNA, 1 μg of RNA was diluted in 176 for 5 min and 4 °C for 1 min, followed by the addition of 4 μl of 5× First 179 Strand Buffer, 1 μl of 10 mM dNTP, 1 μl of RNaseOUT, 2 μl of 0.1 M dithio- 180 were transfected with control or miR-20a mimic or antagomiR for threitol, and 1 ml of MMLV Reverse Transcriptase. The mixture was in- 181 125Q8 oclast differentiation markers. For miR-20a mimic hypoxia study, cells 126 171 Please cite this article as: Sun K-T, et al, MicroRNA-20a regulates autophagy related protein-ATG16L1 in hypoxia-induced osteoclast differentiation, Bone (2014), http://dx.doi.org/10.1016/j.bone.2014.11.026 K.-T. Sun et al. / Bone xxx (2014) xxx–xxx 3 127 24 h. Followed by which the cells were trypsinized, plated and allowed cubated at different temperatures and time points sequentially (25 °C, 182 128 to settle for 4 h. Cells were then subjected to hypoxic treatment for 24 h and after refreshing, osteoclast differentiation medium was added and 10 min; 45 °C, 60 min; 75 °C, 5 min). exposed to normoxic conditions for 6 days. After the complete treatment schedule, cells were lysed and used for further analysis. 2.8. Western blot analysis 129 130 131 132 134 183 184 Cell lysis was performed using lysis buffer (Thermo Scientific, 185 2.3. Osteoclast differentiation Waltham, MA). Samples with equal protein concentration were subject- 186 ed to SDS-PAGE and transferred to a PVDF membrane (PerkinElmer, Life 187 133 Cells were seeded 24 h before treatment. RAW264.7 cells were Science). Blots were blocked with 5% skim milk–TBS–Tween 20 for 1 h 188 grown in α-minimal essential medium supplemented with 10% FBS, at room temperature and probed with primary antibodies (1:500) 189 1% penicillin/streptomycin for 7 days under normoxic (20% O2) condiagainst LC3, ATG16L1, ATG5, p62 and β-actin overnight at 4 °C. Followed 190 tion in the presence of 100 ng/ml RANKL and 20 ng/ml M-CSF. For hyp- by which blots were washed with PBS–Tween 20 and incubated with 191 137 oxia, the cells were exposed to hypoxia for 24 h, followed by which horseradish peroxidase-conjugated secondary antibodies (1:1000) for 192 138 medium was refreshed and incubated in normoxic (20% O2) conditions 1 h at room temperature. The blots were washed and incubated in ECL 193 194 244 solution (Thermo Scientific, Waltham, MA) for 1 min and then exposed by 2.15. Statistical analysis 195 ImageQuant LAS4000 (GE Healthcare). All the experiments were performed as 3 independent experiments 245 in triplicates. The mean and standard deviation were calculated for each 246 of the 196 2.9. Transfection of miRNA mimics determined parameters. Error bars represent standard deviation 247 (SD) of a triplicate set of experiments. Statistical analyses were per- 248 formed using 197 The miRIDIAN miRNA mimics are single-stranded chemically enhanced unpaired Student's t test and ANOVA. The level of statisti- 249 cal significance was 198 oligonucleotides that were designed to mimic miRNA overexpression. set at P b 0.05 and P b 0.01. 250 RAW264.7 cells were transfected with 100 nM of either the miR-20a mimics 199 135 136 200 201 or scramble mimics using the Lipofectamine 2000 reagent after 24 h, cells were plated for the luciferase reporter assay. 202 2.10. miRNA Q-PCR for target gene validation 3.1. Hypoxia 203 Real-time PCR analysis was performed as described elsewhere [18]. Real-time PCR was conducted using universal reverse primer, miRNA- 3. Results induces autophagy 251 and ATG16L1 during osteoclast 252 differentiation 205 206 208 209 210 211 212 213 214 To determine whether autophagy could be induced by hypoxia during 254 specific forward primers, 2× Master mix and UPL probe-21. osteoclast differentiation, RAW264.7 cells were treated with 100 ng/ml 255 RANKL and 20 ng/ml M-CSF under hypoxia and normoxia conditions. 256 After 7 days of treatment (1 day of hypoxia with subsequent treatment 257 2.11. shRNA knockdown by viral infection under normoxia), a marked increase in the number of multinucleated 258 osteoclast-like cells was observed through TRAP staining (Fig. 1A). Fur- 259 207 Human embryonic kidney 293T (HEK293T) cells were cultured as thermore, immunofluorescence staining for LC3 (a major marker of au- 260 described elsewhere [19]. RAW264.7 cells were infected with lentivirus tophagy) showed increase in LC3 expression under hypoxia but not 261 expressing shRNA for HIF-1α (TRCN0000232221) in the presence of 8 μg/ml protamine sulfate for 24 h, followed by puromycin (2 μg/ml; 48 h) selection. shLacZ (TRC0000231726), which targets the LacZ under normoxia (Fig. 1B). The expression levels of Traf6, an early mark- 262 er of osteoclast differentiation increased under hypoxia (Fig. 1C). In ad- 263 dition, the levels of Nfatc1, Ctsk, cFos and Mmp9 were upregulated in 264 CORRECTED PROOF 204 253 gene, was used as a control. The knockdown efficiency of HIF-1α was hypoxia compared to normoxia (Fig. 1C). The mRNA expression of 265 examined using RT-PCR (Biometra T1 thermo cycler). autophagy-related proteins such as LC3, Atg5, Atg12, Atg7 and Atg16l1 266 was upregulated under hypoxic conditions (Fig. 1D). Increased levels 267 of LC3 and ATG16L1 were further confirmed by western blotting 268 2.12. Immunostaining (Fig. 1E). These findings suggest that hypoxia could induce osteoclast 269 differentiation and expression of autophagy-related proteins, including 270 215 After the treatment schedule, RAW264.7 cells were fixed in 4% form- ATG16L1 during osteoclast differentiation (Fig. 1). 271 216 aldehyde. Followed by which cells were then washed with PBS, blocked 217 with 1% BSA and stained with primary antibodies against LC3 or 218 ATG16L1 (1:100) for 60 min and incubated with FITC-conjugated sec- 3.2. Hypoxia reduces miR-20a expression and miR-20a modulates Atg16l1 272 219 ondary antibodies. The nuclei were counter stained with DAPI for 220 30 min. Immunofluorescence of cells was visualized under a Zeiss fluo- Atg16l1 gene is an important player in autophagosome formation. To 273 221 rescence microscope with excitation (ex.) and emission (em.) wave- 222 length, 488 nm and LP 505 respectively. Images captured were TargetScan 4.2 (http://targetscan.org) was used [20]. From the results 275 223 corrected for background investigate miRNA target of Atg16l1 gene, bioinformatics platform— 274 and analyzed for fluorescence intensity seven miRNA candidates were selected: miR-19a-3p, -20a-5p, -93a- 276 224 using Zen software (Ziess). 5p, -96-5p, -106b-5p, -130a-3p, and -142-3p. Next, we determined 277 the expression pattern of the 7 candidate miRNAs in RAW264.7 cells 278 225 2.13. Dual-luciferase reporter assay at an early stage (24 h) of commitment to osteoclast-like cells. The ex- 279 pression patterns of candidate miRNAs that may suppress osteoclast dif- 280 226 RAW264.7 cells at 50% confluence were seeded in six-well plates 227 and allowed normoxia con- 282 228 transfection was performed with miR-20a mimics and Atg16l1 3′UTR re- dition (Fig. 2A). The level of miR-20a in osteoclast differentiation de- 283 229 porter vector using Lipo2000; 1 μg of Atg16l1 3′UTR or control vector creased significantly at days 1, 3 and 5 after 24 h hypoxia treatment 284 for 24 h ferentiation; we focused on miR-20a, which was down-regulated under 281 differentiation. Followed by which, co- hypoxia-induced osteoclast differentiation compared Please cite this article as: Sun K-T, et al, MicroRNA-20a regulates autophagy related protein-ATG16L1 in hypoxia-induced osteoclast differentiation, Bone (2014), http://dx.doi.org/10.1016/j.bone.2014.11.026 to 4 K.-T. Sun et al. / Bone xxx (2014) xxx–xxx 230 and 100 nM miR-20a mimics or scramble mimics per well. Cell extracts 231 were prepared at 24 h after transfection and luciferase activity was 232 measured using the Dual-Luciferase Reporter Assay System (Promega, 233 Madison, WI). 20a during osteoclast differentiation. 288 234 235 236 237 238 239 240 241 242 243 (Fig. 2B). In addition, ATG16L1 was up-regulated during hypoxia- 285 induced osteoclast differentiation as observed through immunofluores- 286 2.14. Chromatin immunoprecipitation (ChIP) assay ChIP was performed according to the manufacturer's instructions (Magna ChIP A/G Chromatin Immunoprecipitation Kit, Millipore, Darmstadt, Germany). Briefly, after the treatment schedule, RAW264.7 cells were fixed with 1% paraformaldehyde and lysed by SDS lysis buffer. The cell lysate was sonicated and protein-DNA complexes were immuno-precipitated with control IgG or anti-HIF-1α antibody. Followed by this, protein/DNA complexes were eluted, reverse cross-linked to free DNA and purified. Q-PCR was performed with primers specific for mouse miR-20a promoter. cence (Fig. 2C). All these data suggested that hypoxia could repress miR- 287 According to the bio-informatics database, we predicted that miR- 289 20a binding site was at the 3′-untranslated region (UTR) of Atg16l1 290 (Fig. 2D). To validate whether miR-20a directly binds to 3′UTR of 291 Atg16l1, we constructed a full length of 3′UTR of Atg16l1, which have 292 highly conserved binding site by miR-20a, and subcloned into a pmir- 293 GLO dual luciferase reporter at the 3′ end of firefly luciferase coding se- 294 quence as 3′UTR of Atg16l1 wild-type (WT), and mutated binding se- 295 quence from GCACTTTA to TTGACCC as 3′UTR of Atg16l1 mutant (MT) 296 (Fig. 2E). Luciferase reporter assay showed that transfection of miR- 297 20a mimics significantly repressed the activity in the 3′UTR of 298 Atg16l1-WT compared with 3′UTR of Atg16l1-MT (Fig. 2E). These results 299 confirmed the specificity of the miR-20a modulation to the 3′UTR of 300 Atg16l1. 301 Please cite this article as: Sun K-T, et al, MicroRNA-20a regulates autophagy related protein-ATG16L1 in hypoxia-induced osteoclast differentiation, Bone (2014), http://dx.doi.org/10.1016/j.bone.2014.11.026 UNCORRECTED PROOF K.-T. Sun et al. / Bone xxx (2014) xxx–xxx Please cite this article as: Sun K-T, et al, MicroRNA-20a regulates autophagy related protein-ATG16L1 in hypoxia-induced osteoclast differentiation, Bone (2014), http://dx.doi.org/10.1016/j.bone.2014.11.026 5 K.-T. Sun et al. / Bone xxx (2014) xxx–xxx Fig. 1. Hypoxia autophagy during differentiation in cells. (A). cells cultured in presence of and M-CSF 0.3% hypoxia for followed by for 6 days) increase in positive multinucleated are mean ± SD, representative of independent experiments in triplicates. *P b compared to Magnification scale bar = 100 Immunostaining Hypoxic (24 h) enhanced levels. LC3 visualized as whereas the stained with appears in blue. compared to Magnification scale bar = 20 μm. representative obtained from individual experiments. qRT(C) showing mRNA expression osteoclast differentiation after 24 h hypoxia. Expression of genes after 24 h The data are the mean ± SD of independent experiments in triplicates. *P b compared to (E). Hypoxic increases Q1 autophagic response of proteins LC3-I, ATG5 and p62 in manner in The relative expressions were β-actin. (For the references to legend, the reader web version of Fig. 2. Atg16l1 miR-20a differentiation miRNA Qcandidate RAW264.7 hypoxia; (B). Q2 at differentiation 3 and 5) post 24 data are shown SD of three experiments triplicates. *P b to normoxia. (C). Immunostaining: cells were ATG16L1 levels osteoclast under hypoxia ATG16L1 visualized as whereas the with DAPI A representative from three experiments. (100×); scale increases osteoclast RAW264.7 RAW264.7 the RANKL (under 24 h normoxia showed TRAPcells. Data three performed 0.05 normoxia. (100×); μm. (B). for LC3: treatment the LC3 protein green color; nucleus DAPI *P b 0.05 normoxia. (200×); A image three PCR results enhanced of UNCORRECTED PROOF 6 markers (D). autophagy hypoxia. shown as three performed 0.05 normoxia. treatment through regulation LC3-II, ATG16L1, a time dependent RAW264.7 cells. protein determined against interpretation of color in this figure is referred to the this article.) is a direct target for during osteoclast under hypoxia. PCR: (A). 7 miRNAs of cells post 24 h miRNA-20a time (days 0, 1, h hypoxia. The as the mean ± independent performed in 0.05 compared ATG16L1 RAW264.7 monitored for at day 7 during differentiation (24 h). protein green color, nucleus stained appears in blue. image obtained individual Magnification bar = 100 μm. Please cite this article as: Sun K-T, et al, MicroRNA-20a regulates autophagy related protein-ATG16L1 in hypoxia-induced osteoclast differentiation, Bone (2014), http://dx.doi.org/10.1016/j.bone.2014.11.026 K.-T. Sun et al. / Bone xxx (2014) xxx–xxx 7 *P b 0.05 compared to normoxia. (D). Base pairing comparison between mature miR-20a and wild type or mutant Atg16l1 3′UTR putative target site is shown according to the TargetScan database. (E). Luciferase reporter assay: The Atg16l1 3′UTR luciferase construct vector (1 μg) was co-transfected into RAW264.7 cells with miR-20a mimic (100 nM) or miR-scramble (100 nM). The results show significant repression of the 3′UTR of Atg16l-WT by miR-20a mimics. The data are shown as the mean ± SD of three independent experiments performed in triplicates. **P b 0.01 compared to normoxia. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.) 302 303 304 305 antagomiR and bafilomycin as a control for autophagic flux in 306 RAW264.7 preosteoclast cells prior to hypoxia-induced osteoclast dif- 307 ferentiation (Fig. 3A). Consistent with the reporter analysis of 3′UTR of 308 Atg16l1, overexpression of To examine the functional role of the miR-20a in osteoclast differentiation, we miR-20a significantly reduced lipidation of 309 ectopically expressed the miR-20a by transfection mimics or LC3 (LC3-II isoform) and ATG16L1 protein level by immunoblots 310 3.3. MiR-20a negatively regulates ATG16L1 of autophagy and osteoclast differentiation Please cite this article as: Sun K-T, et al, MicroRNA-20a regulates autophagy related protein-ATG16L1 in hypoxia-induced osteoclast differentiation, Bone (2014), http://dx.doi.org/10.1016/j.bone.2014.11.026 K.-T. Sun et al. / Bone xxx (2014) xxx–xxx UNCORRECTED PROOF 8 Please cite this article as: Sun K-T, et al, MicroRNA-20a regulates autophagy related protein-ATG16L1 in hypoxia-induced osteoclast differentiation, Bone (2014), http://dx.doi.org/10.1016/j.bone.2014.11.026 K.-T. Sun et al. / Bone xxx (2014) xxx–xxx 311319 312 Please cite this article as: Sun K-T, et al, MicroRNA-20a regulates autophagy related protein-ATG16L1 in hypoxia-induced osteoclast differentiation, Bone (2014), http://dx.doi.org/10.1016/j.bone.2014.11.026 9 K.-T. Sun et al. / Bone xxx (2014) xxx–xxx UNCORRECTED PROOF 10 α has six binding sites on mmu-miR-20a promoter region. Fig. 4. HIF-1α mediates transcriptional silencing of the miR-20a during hypoxia-induced osteoclast differentiation. (A). HIF-1 (B). ChIP assay of RAW264.7 cells treated with shHIF-1α showed marked reduction in binding of HIF-1α with the miR-20a-5p promoter. The data are shown as the mean ± SD of three independent experiments performed in triplicates. ** P b 0.01 compared to normoxia. (C). miR-20a was significantly upregulated in the presence of shHIF-1α under 24 h hypoxia, as determined through miRNA Q-PCR. The data are shown as the mean ± SD of three independent experiments performed in triplicates. P b* 0.05 compared to shLacZ under hypoxia. α. (D). Inhibition of autophagy as demonstrated through reg miRNA Q-PCR of osteoclast progenitor-RAW264.7 cells transduced with lentiviral vectors encoding control shLacZ or shHIF-1 ulation of early autophagy markers— Lc3, P62, Atg5 , Atg12, Atg16l1, Atg7, Becn1 and Atg9a (E). Downregulation of early osteoclast differentiation markers —Traf6, Nfatc1, Ctsk, Cfos, Mmp9 and Trap. The data are shown as the mean ± SD of three independent experiments performed in triplicates.P *b 0.05 compared to shLacZ. (F). Cells were transduced with lentiviral vectors α showed TRAP-negative cells. Data are mean ± SD, representative encoding control shLacZ or shHIF-1α for 7 day osteoclast differentiation and analyzed for TRAPlevels. Cells with shHIF-1 of three independent experiments performed in triplicates. Magni fication (100×); scale bar = 100μm. *P b 0.05 compared to shLacZ. (Fig. 3B). Furthermore, the marker genes of osteoclast differentiation and Atg16l1 decreased after transfection of miR-20a mimics (Figs. 3C, D, E and F). Consistently, osteoclast formation demonstrated by TRAP staining was inhibited by miR-20a mimics (Fig. 3 G). However, antagomiR-20a would restore the inhibitory effect of miR-20a on osteoclast differentiation and formation (Figs. 3C, D, E, F and G). Our data demonstrate that miR-20a reduces autophagy by targeting 3 ′UTR of Atg16l1 and osteoclast differentiation. 313 3.4. HIF-1α suppresses miR-20a under hypoxia Hypoxia regulates the expression of many genes via a highly con- 320 Please cite this article as: Sun K-T, et al, MicroRNA-20a regulates autophagy related protein-ATG16L1 in hypoxia-induced osteoclast differentiation, Bone (2014), http://dx.doi.org/10.1016/j.bone.2014.11.026 K.-T. Sun et al. / Bone xxx (2014) xxx–xxx 11 314 served transcription factor called hypoxia-inducible factor (HIF). To fur- 321 315 ther elucidate the role of HIF-1α on miRNA regulation, the binding sites 322 316 317 of HIF-1α located on miR-20a were determined using the Eukaryotic 323 Promoter Database (http://epd.vital-it.ch/) for upstream positions 324 318 of approximately −2000 to +100 bp. HIF-1α has six binding sites 325 Fig. 3. Inhibition of autophagy and osteoclast differentiation by miR-20a. (A) Relative expression of miR-20a in RAW264.7 cells transduced with miR-20a mimics or antagomiR under hypoxia (24 h). The data are shown as the mean ± SD of three independent experiments performed in triplicates. (B) miR-20a downregulates expression of ATG16L1 and, LC3 under hypoxic environment (24 h) as determined by western blot. The relative protein expressions were determined against β-actin. Relative expression of the osteoclast differentiation markers Q3 (C) Nfatc1, (D) Traf6 and (E) Trap, and (F) autophagy marker Atg16l1 in osteoclast progenitor-RAW264.7 cells transduced with control scramble, miR-20a mimics or antagomiR. The data are shown as the mean ± SD of three independent experiments performed in triplicates. *P b 0.05 compared to scramble. (G) RAW264.7 cells were transduced with control scramble, miR-20a mimics or antagomiR as indicated and allowed to differentiate in the presence of RANKL and M-CSF. After 7 days, cells wereanalyzed for TRAP staining; cells with miR-20a mimics show TRAP-negative cells. Magnification-100×; scale bar = 100 μm. Data are mean ± SD, representative of three independent experiments performed in triplicates. *P b 0.05 compared to miR-20a mimics. 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 on the promoter of miR-20a (Fig. 4A). The down-regulated miR-20a in hypoxia could be a direct interaction between HIF-1α and miR20a. degradation of long-lived proteins are severely impaired in ATG16L1- 390 deficient cells [29]. Since, ATG16L1 is crucial for autophagy process, 391 we in the present study attempted to analyze miRNA target under hyp- 392 oxic To determine whether miR-20a is directly regulated by HIF-1α, we conditions through in-silico gene prediction method. We observed 393 involvement performed loss-of-function experiments by lentiviral infection, viral vector of 7 candidate miRNAs, of which miR-20a-5p showed sig- 394 nificant containing short hairpin sequence knockdown to HIF-1α (shHIF-1α) or LacZ suppression under hypoxic conditions. We further confirmed 395 that miR-20a (shLacZ) as control to RAW264.7 cells. In addition, we confirmed directly targets 3′UTR of Atg16l1 and repressed autophagy 396 by downregulating transcriptional level binding by ChIP assay with HIF-1α antibody on miR-20a autophagy-related proteins LC3 and ATG16L1. We 397 next focused on the effect promoter. The binding of HIF-1α was markedly reduced at the miR-20a of miR-20a on the expression levels of pro- 398 teins involved in osteoclast promoter in the shHIF-1α cells (Fig. 4B) compared to shLacZ cells. differentiation. MiR-20a under hypoxic con- 399 ditions significantly Consistently, cellular expression of miR-20a was increased in shHIF-1α cells downregulated the levels of Nfatc1, Traf6 and Trap 400 and reduced TRAP by miRNA Q-PCR (Fig. 4C). We introduced positive cells. Taken together, modulation of autoph- 401 shRNA via lentiviral transduction into macrophage cells RAW264.7, agy and autophagy-related proteins by miRNA is a critical mechanism in 402 which are enriched for osteoclast progenitors, and then cultured them hypoxia-induced osteoclast differentiation. 403 in RANKL/M-CSF-containing media to induce ex-vivo osteoclast differ- Studies show that lower O2 tension alters bone homeostatic mecha- 404 entiation. Functional analysis was then performed to evaluate 3 hallnisms, thereby leading to bone loss [30]. Hypoxia-induced osteoclast 405 marks of osteoclast differentiation: expression of the autophagy bone resorption functions through highly conserved transcription factor 406 marker (Fig. 4D), expression of the osteoclast differentiation marker (Fig. 4E) and TRAP staining for mature osteoclast (Fig. 4F). Knockdown called hypoxia-inducible factor (HIF-α). During the normal oxygen ten- 407 sion, HIF-α is rapidly destroyed by prolyl hydroxylase domain enzymes 408 of HIF-1α significantly impaired autophagy-related proteins expression and osteoclast differentiation, as evidenced by a mean 10% to 50% reduction in enucleation efficiency relative to scrambled shLacZ (Figs. 4D and 4E). Traf6 level and osteoclast differentiation decreased in shHIF-1α line through proteasomal degradation. However, under hypoxic conditions, 409 HIF-1 α stabilizes and transactivates genes involved in adaptive re- 410 sponses [31,32]. Increased osteoclast differentiation and subsequent re- 411 sorption activity were observed under hypoxic conditions [33]. Studies 412 (Figs. 4E and F). These findings highlight that HIF-1α may suppress demonstrate differential expression of hypoxia regulated miRNAs 413 miR-20a expression on transcriptional level during hypoxia-induced os(HRMs) under pathological conditions [34,35]. In the context of osteo- 414 teoclast differentiation. clast differentiation, Sugatani et al. [21] was first to identify the involve- 415 ment of microRNA (miR-223) in bone metabolism through inhibition of 416 4. Discussion osteoclast differentiation in RAW264.7 cells. Recently, Lee et al. [8] have 417 showed that miR-124 suppresses NFATc1 expression and regulates os- 418 353 miRNA profiling of RAW 264.7 cells and monocyte/macrophage pre- teoclastogenesis in bone marrow macrophages. However, there is a 419 cursors shows hundreds of miRNA candidates involved in osteoclast diflack of clear understanding on the role of hypoxia–miRNA interaction 420 ferentiation [9,21]. However, the role of hypoxia in enhancing osteoclast in osteoclast differentiation. We in the present study determined that 421 CORRECTED PROOF 326 327 differentiation through miRNA mediation remains elusive. Here, we HIF-1α has a regulatory role by binding to the promoter of miRNA- 422 confirmed that the regulatory axis of HIF-1α–miRNA-20a–Atg16l1 is a 20a and represses its activity. Similar to our finding, He et al. showed 423 critical mechanism in hypoxia-induced osteoclast differentiation. that HIF-1α down-regulates miR-17 and -20a by directly targeting 424 Hypoxia and inflammatory cytokines are involved in initiation and p21 and STAT3 in myeloid leukemic cell differentiation [36]. We 425 progression of osteoclast differentiation. Interleukin-1 mediates TNF- showed experimental evidence that there was a significant reduction 426 induced osteoclastogenesis by enhancing the stromal cell expression in HIF-1α-miRNA-20a binding with concomitant increase in miR-20a 427 of RANKL [22], while hypoxia enhances osteoclastogenesis via increased levels in the presence of shHIF-1α; thus shows clear evidence of HIF- 428 RANKL expression in the periodontal ligament of the compressed (hyp1α in negative regulation of miRNA-20a. From HIF-1α knockdown 429 oxic) side [23]. Growth differentiation factor 15, which is secreted from studies, we further confirmed effective down regulation of autopha- 430 osteocytes, significantly promotes osteoclast differentiation under gy and osteoclast differentiation markers. Thus, these findings con- 431 hypoxic condition [24]. From the present study, we demonstrated that firm that HIF-1α could modulate miRNA including miR-20a in 432 hypoxia caused an increase in TRAP-positive cells with significant up- hypoxia-induced osteoclast differentiation. The interaction between 433 regulation in osteoclast differentiation markers. Further, we also identi- HIF-1α and miRNAs may be an important mechanism in osteoclast 434 fied that hypoxia caused significant enhancement in autophagy through differentiation. 435 regulation of autophagy-related proteins in RAW 246.7 cells in the In summary, the present work highlights the role of miR-20a in 436 presence of RANKL and M-CSF. Previous study conducted by Zhao autophagy-related osteoclast differentiation under hypoxia stress. The 437 et al. reveals that autophagy regulates hypoxia-induced osteoclast dif- regulatory axis of HIF-1α–miR20a–Atg16l1 might be a critical mecha- 438 ferentiation through HIF-1α/BNIP3 signaling pathway in RAW264.7 nism for hypoxia-induced osteoclast differentiation. 439 cells [12]. Thus, induction of autophagy might be an important process Supplementary data to this article can be found online at http://dx. 440 in osteoclast differentiation under hypoxic condition. doi.org/10.1016/j.bone.2014.11.026. 441 Please cite this article as: Sun K-T, et al, MicroRNA-20a regulates autophagy related protein-ATG16L1 in hypoxia-induced osteoclast differentiation, Bone (2014), http://dx.doi.org/10.1016/j.bone.2014.11.026 12 376 377 K.-T. Sun et al. / Bone xxx (2014) xxx–xxx The vital importance of miRNAs in the modulation of target genes involved in the autophagy pathway has recently been highlighted [25]. 378 379 MiR-376b controls autophagy by directly targeting the intracellular levels of two key autophagy proteins, ATG4C and beclin-1, in the 3′ 380 UTR of their mRNAs [26]. MiR-101 suppresses autophagy by targeting rasrelated protein Rab-5A, stathmin 1, and ATG4D in MCF-7 breast cancer cells to sensitize chemotherapy for cell death [27]. Furthermore, miR-21 regulates osteoclastogenesis via down-regulating programmed cell death protein 4 (PDCD4) [21]. Gain and loss of miR-375 function reflect the regulation of ATG7 expression by autophagy under hypoxic conditions [28]. In the present study, we determined the candidate miRNA target for Atg16l1 gene, the complex protein which regulates autophagy. ATG16L1 complex is involved in LC3 lipidation for autophagosome formation. 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