Biological Macromolecules & enzyme Heba Al-Tamimi 1 Macromolecules Examples: 1. Carbohydrates 2. Lipids 3. Proteins 4. Nucleic acids All of the above are polymers except lipids Polymers : formed by joining one or more building blocks called MONOMERS. 2 Dehydration Synthesis • Polymers are formed by dehydration synthesis that involves removal of water. HO H HO H H2O HO H 3 Hydrolysis • Separates monomers by “adding water” HO H H2O HO H HO H 4 Carbohydrates 5 Carbohydrates: Structure • Classfication • Monosaccharides: simple sugars (monosaccharides) • Ex.: glucose – Polymer (chain of units): complex carbohydrates (or polysaccharides) • Ex.: starch, cellulose, chitin, glycogen Disaccharide: 2 simple sugars bonded together Carbohydrates Monosaccharide: one sugar unit Examples: glucose (C6H12O6) Fructose Galactose glucose 7 Carbohydrates Disaccharide: double sugar Examples: – Sucrose (glucose+fructose) – Lactose (glucose+galactose) – Maltose (glucose+glucose) glucose glucose 8 Carbohydrates Polysaccharides: polymers composed of many sugar building blocks Examples: starch glycogen cellulose glucose glucose glucose glucose cellulose glucose glucose glucose glucose 9 Carbohydrates: Indicator Tests • Reducing sugars : Benedict’s test is used as a simple test for detecting reducing sugars • Complex Sugars(Polysaccharides) Lugol’s test /Iodine 5-1 Benedict’s solution -CooH 1- + Cu2O + CuSO4/0H (Red –brown precipitate) Maltose 2- reducing Glucose + Galucose 11 Benedict’s solution Sucrose Non-reducing 3Glucose + Fructose Lactose 4- Non-reducing Glucose + Galactose 12 Benedict’s test glucose maltose sucrose starch H2 O 2cm Benedict 1cm solution Fill 5 of test tubes to I cm with following solution: {glucose, maltose, sucrose, starch & water} Fill each of the test tube to the 3 cm mark with Benedict’s reagent Place test tube in hot water bath (5 min) Observe color change 13 5-2 The iodine test(lugol’s)for starch • Detect the presence of starch Starch :glucose polymer Glycogen: glucose polymer Iodine potassium iodide, I2KI, interacts w coiled starch and becomes bluish black color So ,form is important iodine test(lugol’s) glucogen glucose sucrose starch H2 O 2 drop Lugol’s 2cm solution Fill 5 of test tubes to I cm with following solution: {glucose, sucrose, starch ,glucogen & water} Add 2 drops of Iodine Observe color change 15 Negative Test Positive Test Proteins 17 Proteins: Structure • Proteins are made up of… Monomer (basic unit): amino acids • 20 different kinds! Amino acids linked by peptide bonds Proteins Ninhydrin test for amino acids (aas.) aas. having free amino groups are readily detected with ninhydrin -> purple or violet The Biuret test for polypeptide The amino group in one aas. is linked to carboxyl group on an adjacent aas. by a peptide bond this band is the site of action for the Biuret test for protein , Cu 2+must complex with at least four to six peptide bounds to produce violet color 19 5-3 Ninhydrin test for amino acid albumin glycogen milk a.a H2 O 5 drop ninhydrin + heat 2 cm solution Fill 5 of test tubes to I cm with following solution: {albumin ,glycogen, milk ,a.a (glycine) & water} Add drops of ninhydrin reagent Place test tube in hot water bath (5 min) Observe color change @ sink Skin irritation 20 The Biuret test for polypeptide albumin glycogen milk a.a H2 O 2 cm Biuret 2 cm solution Fill 5 of test tubes to 3 cm with following solution: {albumin ,glycogen, milk ,a.a (glycine) & water} Fill each test tube to the 4 cm with Biuret solution and mix Observe color change 22 5-4 The Biuret test for polypeptide 1% CuSO4 -> Cu2+ Complexes w at least 4-6 peptide bonds and produces violet color 23 Lipids 24 Lipids: Structure • Fat is constructed from 2 kinds of smaller molecules : 1-glycerol 2-fatty acid • Lipids are not soluble in water, but soluble in organic solvents. Lipids “demo” 5-6 Lipid Solubility test Lipids are insoluble in polar solvent and soluble in nonpolar solvent fill 2 tubes to the 2 cm mark with corn oil In First tube, add 5 ml of tap water In second tube, add 5 ml of mineral oil Detect solubility 5-5 Sudan red for fat (book) Sudan red is a lipid soluble dye • Add 10 drops of Sudan red to tube number 1 in above experiment • Observe color , where is the red color found? 26 Nucleic Acids 27 Nucleic Acids: Structure • Nucleic Acids are made up of… – Monomers (basic units): nucleotides • Two types: Deoxyribonucleic acid (DNA-double helix) Ribonucleic acid (RNA-single strand) 5-9 Dische diphenylamine test “demo” • In this test ,acidic condition convert deoxyribose to a molecule that binds with diphenylamine to form a blue complex. Number 3 test tube 1-3 Into tube 1,place10 drops of banana DNA Into tube 2,place 10 drops of standard DNA Into tube 3,place 10 drops of distilled water Add 1 ml of diphenylamine regent Banana Place in a boiling water bath for 10 min Transfer the tubes to ice Observe color change. DNA Standard DNA water Enzymes… 30 Enzyme Substrate(s) +enzyme Optimal conditions We will take 2 examples 1- casein (protein milk)+Rennin 2- catechol +catechol oxidase product(s) Optimal condition Optimal condition coagulation benzoquinone 31 Enzyme (Rennin) • Rennin is found in the stomach of young mammals • The enzyme coagulate the casein ,a protein found in milk • Optimal condition pH = ~7 (neutral) Temperate = 37 C 32 6-1 Effect of temperature on enzyme activity Put 3 ml Rennin Place at 100 C for 5 min Place at 0 C for 5 min Place at 37 C for 5 min “Accurate measures” Add milk (2/3) full ,then incubate to 37 C for 15 min 33 6-2 Effect of pH on enzyme activity Put 3 ml Rennin Add 3 ml HCl Add 3 ml NaOH Add 3 ml H2O Add milk to each tube (2/3) full ,then incubate at 37 C for 15 min 34 6-4 Enzyme (Catechol oxidase) “demo” • Catechole oxidase is an enzyme that turns bruised or cut fruits and vegetables brown • Catechol is a clear chemical ,when it reacts with oxygen in presence of the enzyme catechol oxidase ,it forms the dark brown product ,benzoquinone 35 Catechol oxidase “Demo” • Prepare 3 test tubes using the following table 36 Go To Work…… 37