Name: __________________________________________________ Date: ___________ Period______ Making Proteins – The Central Dogma of Biology Handout The Central Dogma of Biology represents the molecular flow of information in living organisms. It is simply the idea that information flows from DNA to RNA to Protein, and that proteins are responsible the traits of an organism. DNA is the genetic information in cells, storing all of the blueprints for building the organism. The process by which this information is used to build an organism occurs in two main steps: transcription, in which a copy of a gene’s nucleotide sequence is made, and translation, in which that copy is used to direct the production of a specific protein. RNA is Ribonucleic Acid Within the cell, DNA is the ultimate source of all genetic information and is protected by being kept inside the nucleus. RNA is another nucleic acid, highly similar to DNA, which is used as a messenger service in the cell to send information from the DNA to the cytoplasm, where proteins are produced. There are a number of important similarities and differences between DNA and RNA. DNA and RNA are both organic polymers built from nucleotide monomers, and each uses the bases adenine (A), cytosine (C), a guanine (G). Where DNA uses the base thymine (T), RNA uses the base uracil (U). In addition, while DNA is stored in the nucleus as a double-stranded double helix, RNA is a single-stranded molecule that leaves the nucleus to go to the cytoplasm. Just like in DNA, it is the sequence of nucleotides (the nucleotide bases) that represents the information stored in a molecule of RNA and a different sequence provides different information. Transcription: Copying in the Language of Nucleic Acid In order to make a protein from the instructions written in the sequence of DNA, cells must first transcribe the sequence of DNA into a molecule of messenger RNA, or mRNA. This process is called transcription. Transcription begins with the action of a group of proteins that bind to a sequence in the DNA that indicates a gene sequence is nearby. These proteins then unwind the DNA double helix and an enzyme called RNA polymerase is moves along one of the two DNA strands, known as the template strand. As it moves, the RNA polymerase “reads” the DNA sequence of nucleotides and builds a complementary mRNA according to the rules of base pairing. As with DNA, cytosine (C) always binds to guanine (G). However, because RNA uses uracil (U) instead of thymine (T), when the RNA polymerase reads an adenine (A) in the DNA, it uses a uracil (U) to complementary pair with the adenine and adds the uracil (U) to the growing RNA polymer. Once the mRNA copy is complete, the DNA winds back together, and the single-strand of mRNA leaves the nucleus. In the cytoplasm, this mRNA then serves as the information for an organelle called the ribosome to build a protein. Translation: Nucleic Acid Language into the Language of Amino Acids Once the mRNA reaches the ribosome, the information encoded in the nucleotide sequence can be translated into the language of amino acids and a protein can be made. This process of building protein based on the instructions in an mRNA sequence is called translation. The ribosome itself is also made of Name: __________________________________________________ Date: ___________ Period______ RNA (known as rRNA) and functions as an enzyme, catalyzing (speeding up) the reaction than links amino acids together to build a protein. During translation, the ribosome “reads” the mRNA message and builds a chain of amino acids. The ribosome acts like a factory while mRNA serves as the instruction that details which amino acids should be joined together to form a protein. Amino acids are called for based on groups of three nucleotides called codons. Each codon is like a word: its letters name a particular amino acid. For example, the codon GGU (in the mRNA sequence) specifies the amino acid glycine should be added to the growing protein. In order to build the growing protein, the ribosome works with a third type of RNA called transfer RNA, or tRNA. tRNA is responsible for physically bringing the required amino acids to the ribosome. Each tRNA has a structure that allows it to act as an adaptor: one end of the tRNA binds to a single amino acid while the other end binds to the mRNA. The part that binds mRNA is called the anticodon because it has complementary base pairing with an mRNA codon. When the tRNA containing the appropriate anticodon binds with the mRNA codon, the tRNA releases the amino acid to the ribosome. The ribosome then catalyzes the reaction that adds the amino acid to the growing protein molecule. These rules by which mRNA codons specify amino acids are known as the genetic code. Many mRNA molecules are hundreds to thousands of nucleotides long, and this sequence includes codons that signal the ribosome to start and stop translating. The codon AUG is always used as a START sequence and (almost) every protein made starts with the amino acid methionine (Met), and is known as the start codon. After building the protein the ribosome eventually reads a stop codon that signals the end of translation. The three possible stop codons are UAA, UAG, and UGA. After reading a stop codon, the ribosome releases both the mRNA transcript and the completed protein. Every step in the process to build proteins requires a significant amount of ATP to provide the energy for the various chemical reactions that must occur. Accordingly, cells use sophisticated ways to control which proteins are made, so as to only make those that will be used by the cell. Mutations – Part of all of us The word mutation has a lot of negative meaning in our common, spoken language, however in the language of biology it means little more than a change in DNA sequence. Mutations can involve large regions of a chromosome, or a single nucleotide pair, which is the case for the disease Sickle Cell Anemia. When a mutation occurs within the DNA sequence of a gene, this leads to a change in the mRNA sequence, which frequently leads to changes in the amino acid sequence of the corresponding protein and therefore its structure and function. Mutations that change a single DNA nucleotide for a different nucleotide are called substitution mutations. Mutations that add a new nucleotide are insertion mutations. Mutations that remove a nucleotide are deletion mutations. Although mutations are often harmful, they can also change a protein in a way that may be beneficial. In humans, there are 175 new mutations each generation. Overall, mutations are the ultimate source of variation and genetic diversity in all living.