Table S2 List of functionally annotated domain of 429 HPs from H. influenzae by CATH, SUPERFAMILY, PANTHER, Pfam, SYSTERS,
CDART SVMProt and ProtoNet
S.NO
UNIPROT
ID
CATH
SUPERFAMIL
Y
PANTHER
families
Pfam
(family/Domain)
SYSTERS
(cluster)
CDART
SVMProt
(family)
ProtoNet
Cluster
(cluster
name)
Cluster146746
Arsenic
efflux pump
TC 2.A.
Electrochemi
cal Potentialdriven
transporters Porters
(uniporters,
symporters,
antiporters)
Cluster
3631830
Sodium/sul
fate
symporter
DUF493
superfamily
All lipid
binding
proteins
Cluster
3959135
(subfamily/fa
mily
/superfamily )
1
2
3
4
Q57048
P44465
P44471
P44472
No result
No result
UPF0250
protein
MCA0107 like domain
family
YbeD-like
family
ATPase
synthesis
protein 25,
mitochondri
al -like
domain
family
Putative
transport
protein
YidE -like
Iojap/YbeB-like
family
2oxoglutarate/
malate
translocator
subfamily
Sodium: sulfate
symporter
transmembrane
family
No result
DUF493 family
(2oxoglutarat
e/malate
translocator
)
Cluster 156264
(hypothetic
al protein)
(Nucleotidyl
transferase)
TrkA C-terminal
domain-like
family
Iojap
superfamily
ortholog
family
Oligomerization
family
Cluster 153016
Uncharacteri
zed family
TrkA_c family
Cluster(Regulator of K+ 151662
conductance, Cterminal)
(Aspartate:
Oligomeriza Iron binding
tion
superfamily
(Iojap
related
protein)
TrkA_c
superfamily
Transmembr
ane
Protein of
unknown
function
DUF493
Cluster
4170010
Iojap
related
protein
YidE/YbjL
duplication
(cation
transport)
5
6
7
8
P43929
P43931
P44477
P44478
domain ½
family
Regulator of Hypothetical
ribonuclease protein VC0424
activity B family
like domain
family
No result
No result
No result
No result
RraB family
(Regulator of
ribonuclease
activity B
Domain)
Calcium
ATPase,
transmembrane
domain M
family
No result
No result
Bax
inhibitorrelated
family
Bax1-I family
No result
YtfJ_HI0045
family
No result
DUF697 family
alanine
antiporter)
Cluster155970
DUF695
superfamily
mRNA
slicing
(DNA for
Glycosyltra
nsferases,
lytic
transglycos
ylase,
dTDP-4rhamnose
reductase)
Cluster –
149616
Cluster
3251533
Conserved
hypothetica
l protein
CHP01619
(catalytic
activity)
DUF697
superfamily
EC 4.1.-.-:
Lyases CarbonCarbon
Lyases
Cluster
418116
(GTPbinding
protein)
cluster 141641
B-I-1 like
superfamily
Transmembr
ane
(Putative
carrier/tran
sport
protein)
cluster
144963
(Protein
YTFJHI0045
superfamily
No result
Conserved
hypothetica
l protein
CHP01620
Cluster
3845992
Uncharacte
rized
protein
family
UPF0005
Cluster
3999593
Conserved
9
P44484
No result
No result
Family not
named
DctQ family
ytfJ
precursor
)
Cluster 140419
Dct-Q
superfamily
Transmembr
ane
SBP_bac_7
superfamily
EC 2.4.-.-:
Transferases
Glycosyltran
sferases
(Serpentine
receptor
class alpha
3)
10
11
12
P71336
P43932
P44492
No result
No result
Replicationassociated
protein -like
domain
family
Phosphate
binding proteinlike family
No result
SBP_bac_7
family
(Bacterial
extracellular
solute-binding
protein)
Cluster147378
Cluster144352
TerC
superfamily
Transmembr
ane
(TerC
family
protein )
Cluster149840
AAA
superfamily
Iron-binding
Calcium
ATPase,
transmembrane
domain M
family
Inner
membrane
protein
family
Integral
membrane
protein TerC
family
YjeE-like family
(P-loop
containing
nucleoside
triphosphate
hydrolases
superfamily)
No result
Uncharacterized
P-loop hydrolase
UPF0079 family
(Extracellul
ar solutebinding
protein,
family 7)
(ATPase
OR kinase)
hypothetica
l protein,
YtfJ
Tripartite
ATPindependen
t
periplasmic
transporter,
DctQ
component
Cluster
4180508
Extracellul
ar solutebinding
protein,
family 7,
bacteria
Cluster
4019065
Integral
membrane
protein
TerC
Cluster
4166012
Uncharacte
rized
protein
family
UPF0079,
13
P43935
No result
14
P43936
mRNA
interferase
MazF -like
domain
family
15
P44500
Deoxyribon
uclease
TatD -like
domain
family
16
P43937
17
P43938
MiaE-like family Ferredoxin(Ferritin-like
related
superfamily )
family
Kid/PemK
family
(Cell growth
inhibitor/plasmid
maintenance
toxic component
superfamily)
TatD Mgdependent
DNase-like
family
No result
Acyl-CoA
dehydrogen
ase -like
domain
family
Medium chain
acyl-CoA
dehydrogenase,
NM (N-terminal
and middle)
domains family
No result
No result
No result
No result
TATD
family
deoxyribonu
clease
Protein of
unknown
function
(DUF455)
family
PemK-like
protein family
Cluster148957
(3-oxoacyl[acylcarrierprotein]
synthaselike
protein)
Cluster133513
Ferritin like
superfamily
EC 2.7.-.-:
Transferases
Transferring
PhosphorusContaining
Groups
PemK
Zinc binding
superfamily
(toxin of the
(Hypothetic ChpB-ChpS
al protein
toxinyifN)
antitoxin
system)
TatD_DNase
ClusterMetallo_de Zinc-binding
family
149137
pendent_hy
drolases
(Hydrolase, superfamily
TatD
family)
Acyl-CoA_dh_N ClusterACDA
Metalfamily
109390
superfamily binding
(Acyl-COA
dehydrogenase
(Putative
,N-terminal
acyl-CoA
domain)
dehydrogen
ase)
No result
Cluster No result
All DNA
ATPase
bacteria
Cluster
3942395
Protein of
unknown
function
DUF455
Cluster
3597088
Plasmid
maintenanc
e toxin/Cell
growth
inhibitor
Cluster
4150200
Deoxyribon
uclease,
TatD Mgdependent
Cluster
4673817
Eukaryota
Cluster
18480
binding
(hypothetic
al protein)
18
19
20
21
P44506
P44507
Q57493
P44509
Alanine
racemase like domain
family
"Hypothetical"
protein ybl036c
family
(PLP-binding
barrel
superfamily)
Proline
synthetase
cotranscribed
bacterial
homolog
protein
family
Glycerate
kinase -like
domain
family
Glycerate kinase
I family
Glycerate
Gly_kinase
kinase family family
No result
No result
No result
Ala_racemase_N Clusterfamily
140661
PLPDE_III
superfamily
Metal
binding
Gly_kinase
superfamily
EC 2.7.-.-:
Transferases
Transferring
PhosphorusContaining
Groups
TC 2.A.
Electrochemi
cal Potentialdriven
transporters Porters
All DNA
binding
(Alanine
(Putative
racemase, NProline
terminal domain) synthetase
associated
protein)
Cluster155132
(glycerate
kinase)
No result
gnt family
gluconate
transporter
family
GntP permease
family
No result
Diacid_rec
family
(Putative sugar
diacid
recognition )
Cluster145230
PRK10034
superfamily
(gluconate
permease)
Cluster –
147588
(carbohydr
ate diacid
regulator)
Diacid_rec
superfamily
651650
Haemophil
us
influenzae
Cluster
4106519
Predicted
pyridoxal
phosphatedependent
enzyme,
YBL036C
type
Cluster
4144170
Glycerate
kinase,
domain 2
Cluster
3750408
Divalent
ion
symporter
Cluster
4157002
Putative
sugar
diacid
22
23
24
25
26
P43939
Q57060
P43940
P44515
Q57354
No result
Ribosomal
protein L11
methyltransf
erase -like
domain
family
No result
Regulatory
protein spx like domain
family
No result
UbiE/COQ5-like
family
(S-adenosyl-Lmethioninedependent
methyltransferas
es superfamily )
No result
ArsC-like family
(Thioredoxinlike
suprerfamily)
UPF0135
NIF3 (NGG1p
protein ybgI interacting factor
-like domain 3)-like family
2 family
NAD
dependent
epimerase/de
hydratase
Family
GntP permease
family
Cluster142884
Methyltransf
erase family
Methyltransf_11
family
(nucleoside
diphosphat
e sugar
epimerase)
Cluster –
141931
No result
No result
NGG1
interacting
factor 3
superfamily
No result
Arsc family
NADB_Ros
sman
superfamily
AdoMet_M
Tases
superfamily
(SAM
dependent
methyltrans
ferase)
Cluster –
No result
113245
recognition
Cluster
4107863
EC 2.4
Transferases
glycosyltrans NAD
ferases
dependent
epimerase/
dehydratase
Zinc binding Cluster
3952797
Methyltran
sferase type
11
All lipid
binding
proteins
(lipoprotein
)
Cluster –
GST_C_fa
All lipid
148069
mily
binding
Superfamily protein
(Arsenate
reductase)
NIF3 family
Cluster –
(NGG1p
144114
interacting factor
3)
(NGG1interacting
NIF3
superfamily
Ec 4.1
layasescarboncarbon
lyases
Cluster
3845090
Haemophil
us
influenzae
Cluster
4139373
Conserved
hypothetica
l protein
,ArsC
related
Cluster
3959512
NIF3
(NGG1p
interacting
factor 3)
27
P44520
No result
No result
No result
28
P43943
Lipopolysac
charide
biosynthesis
protein -like
domain
family
FepE-like family
(Bacterial
polysaccharide
co-polymeraselike superfamily
)
No result
29
P71339
Myb-related
protein -like
domain ½
family
Homeodomainlike/TrpR-like
superfamily
No result
30
Q57097
SUMOactivating
enzyme
subunit 1 like domain
½ family
Molybdenum
cofactor
biosynthesis
protein MoeB
family
Ubiquitin
activating
enzyme E1
family
No result
No result
No result
31
P43947
DUF1212 family Cluster –
145492
(Putative
integral
membrane
protein )
Cluster104440
GTP_EFTU
family
(Elongation
factor Tu GTP
(transcripti
binding domain ) on
elongation
factor )
HTH_28 family Cluster –
(Helix-turn-helix 142986
domain)
(putative
transposase
)
ThiF family
Cluster –
141827
(Molybden
um
biosynthesi
s protein)
DUF2301 family Cluster –
112930
(putative
factor 3
like
Protein of
unknown
function
DUF 1212
Nucleotidyl
_cyc_III
superfamily
Transmembr
ane
No result
Ec-2.7
Transferases
Phosphorus
containing
group
Cluster
3393659
Haemophil
us
HTH_23
superfamily
RNA
binding
protein
Cluster
360664
Acid
phosphatas
e
E1_enzyme
_family
superfamily
Transmembr
ane
DUF2301
superfamily
,
zf-ribbon_3
Transmembr
ane
Cluster
4090928
UBA/THIF
-type
NAD/FAD
binding
fold
Cluster
3939039
Gammaprot
eo bacteria
32
33
34
35
36
P44530
P43952
P44540
P44542
P44543
No result
No result
Bifunctional
protein glk like domain
family/
Glucose-6phosphate
isomerase like domain
½ family
No result
No result
No result
No result
Xanthin/urac
il/vit C
permease
family
member
Permease family
No result
AsmA_2
Family
(Asm-A like Cterminal region )
mono-SIS
domain family
/Homeodomainlike superfamily
Glucokinase
family
Phosphate
binding proteinlike family
No result
No result
HTH_6 family
(Helix turn helix
,rpiR family )
Family not
integral
membrane
protein)
Cluster –
147664
(xanthin/ur
acil
permease)
Cluster –
140134
(Penicillin
binding
protein )
Cluster –
144388
superfamily
No result
Transmembr
ane
Cluster
4145036
Xanthin/ura
cil/vit C
permease
No result
Transmembr
ane
Cluster
3742698
pasteurellac
eae
SIS
superfamily
Transferases
–
transferring
alkyl or aryl
group , other
than methy
group
Cluster
4192755
Helix turn
helix
protein
RpiR
SBP_bac_7
superfamily
All lipid
binding
protein
DctQ
Transmembr
Cluster
4180508
Extracellul
ar solute
binding
protein ,
family 7 ,
bacteria
Cluster
(transcripti
onal
regulator ,
RpiR
family )
SBP_bac_7
family
Cluster –
147377
(Bacteria
extracellular
solute binding
protein )
(C-4
dicarboxyla
te binding
protein )
DctQ family
Cluster –
named
147373
(Tripartite ATPindependent
periplasmic
transporter)
37
O86220
No result
No result
No result
Got1/Sft2-like
family
38
P43953
No result
No result
Protein-S
Isoprenylcyst
eine Omethyltransf
erase family
PEMT family
Band 7
protein
related
family
SPFH domain ,
Band 7 family
Phosphopant
etheinyl
transferase
family
ACPS family
(4'phosphopantethe
inyl transferase
superfamily)
39
40
P44545
P43954
No result
Holo-[acylcarrierprotein]
synthase like domain
family
Band 7/SPFH
domain family
4'Phosphopantethe
inyl transferase
SFP family
(Phospholipid
methyl
transferase )
superfamily
(permease
component
of C-4
dicarboxyla
te
transporter
)
Cluster No result
18576
(hypothetic
al protein)
Cluster –
PEMT
146297
superfamily
(putative
protein-Sisoprenyl
cysteine
methyltrans
ferase )
Cluster –
Band_7
143375
superfamily
(HFLC
protein )
Cluster –
115344
(putative
4’phosphopa
ACPS
superfamily
ane
4101809
TRAP
dicarboxyla
te
transporter
, DctM
subunit
Transmembr
ane
No result
Photosynthe
sis
Cluster
4548116
C-terminal
protein
amino acid
methylation
EC-3.4
hydrolases –
acting on
peptide
bonds
Metal
binding
family
Cluster
4131544
HFLC
Cluster
4098210
4’phosphopa
ntetheinyl
transferase
41
42
43
44
45
P43790
P43960
P44552
P44553
P43961
No result
No result
No result
No result
No result
No result
Putative
uncharacteri
zed protein like domain
family
CNF1/YfiH-like
putative cysteine
hydrolases
superfamily
Uncharacteri
zed family
YFIH
Mitochondri
a fission 1
protein -like
domain
family
Tetratricopeptide No result
repeat (TPR)
family
No result
NE1680likefamily
No result
DUF 177 family
DUF539 family
Cu-oxidase_4
family
(multi-copper
polyphenol
oxidoreductase
laccase )
YfiO family
(Outermembrane
protein
lipoprotein
domain)
LPAM_1 family
(Prokaryotic
membrane
lipoprotein lipid
ntetheinyl
transferase)
Cluster –
156287
DUF 177
superfamily
No match
(predicted
metal
binding )
Cluster –
133282
DUF539
superfamily
Transmembr
ane
Cu_oxidase
_4
superfamily
All lipid
binding
protein
No result
All lipid
binding
protein
(putative
periplasmic
protein )
Cluster –
154635
(putative
inner
membrane
protein )
Cluster –
154926
(putative
competence
protein
ComL)
Cluster –
No result
121456
(P36 like
protein
All lipid
binding
protein
Cluster
4143789
Protein of
unknown
function
DUF177
Cluster
4129373
Protein of
unknown
function
DUF539
Cluster
4170210
multicopper
polyphenol
oxidoreduct
ase laccase
Cluster
4133061
Outer
membrane
assembly
lipoprotein
YfiO
Cluster
3750388
Periplasmic
protein
HI0178
46
P46490
No result
No result
Transmembr
ane protein
YfcA family
attachment site
motif)
Sulfite exporter
TauE/SafE
family
homolog)
Cluster –
150623
PRK10621
super
family
Transmembr
ane
No result
Transferases
–
transferring
phosphorus
containing
group
Y1_Tnp
superfamily
All lipid
binding
protein
Cluster
4081513
Proteobacte
ria
Cluster –
156419
DUF417
superfamily
Transmembr
ane
(putative
membrane
protein )
Cluster –
149074
UDG like
superfamily
Transmembr
ane
Cluster
4017619
Protein of
unknown
function
DUF417
Cluster
4097728
Uracil
DNA
(transporter
protein )
47
48
49
50
P43963
P43965
P44577
O86222
No result
Transposase
for insertion
sequence
element
IS200 -like
domain
family
No result
racil-DNA
glycosylase
-like
domainfami
No result
Transposase
IS200-like
family
No result
No result
RecX family
Transposases
IS200 like
family
Cluster –
65234
(predicted
transcriptio
nal
regulator ,
Fis family )
Cluster –
156161
(YAFM
protein)
No result
Mug-like family
(Uracil-DNA
glycosylaselikesuperfamily)
No result
No result
DUF417 family
UDG family
(Uracil DNA
glycosylasesuper
family )
(Uracil
Cluster
4629881
Protein of
unknown
function
DUF81
Cluster
638968
Haemophil
us
influenzae
ly
51
52
53
54
55
P44579
P44583
P43966
P43968
P44588
No result
Multidrug
resistance efflux
transporter EmrE
family
Putative
chloramphen
icol
resistance
transporter
family
No result
uncharacteri
sed family
185 -like
domain
YhcH-like
family
(Clavaminate
synthase-like
superfamily)
General
stress
protein A like domain
family
Glycogenin
No result
family/Galactosy
ltransferase LgtC
family
No result
No result
(Nucleotidediphospho-sugar
transferases
superfamily )
No result
No result
No result
No result
Multidrug
resistance efflux
transporter
family (EmrE
family )
Domain of
unknown
function
(DUF386)
family
No result
DNA
glycosylase
)
Cluster145543
DUF331 family
EmrE
superfamily
Transmembr
ane
Cluster
4593188
RarD
protein
DUF386
superfamily
EC 2.4.-.-:
Transferases
Glycosyltran
sferases
Cluster
3982124Co
nserved
hypothetica
l protein
CHP00022
Glyco_tranf EC 1.9.-.-:
_GTA_type Oxidoreduct
Superfamily ases - Acting
on a heme
group of
donors
Cluster
3612942
Biotin-[acetylCoAcarboxylase
] ligase
No result
No result
DUF 3331
superfamily
Zinc binding
Cluster
801874
Haemophil
us
influenzae
Cluster
4325097
(RarD
protein)
Cluster156379
(Evolved
betagalactosida
se betasubunit)
Cluster48523
(hypothetic
al
membrane
lipoprotein)
No result
glycosylase
Cluster120053
(hypothetic
al protein )
Cluster133502
(putative
regulator)
56
57
58
59
60
P44593
P43971
P43972
P71346
P44606
Sulfurtransf SirA-like family
erase TusA
-like domain
family
No result
Iron-sulfur
cluster
repair
protein YtfE
-like domain
family
Formin
homology 2
domain (FH2
domain) family
No result
No result
No result
No result
Ribosomal
subunit
interface
protein -like
domain
family
1-(5-
Sulfurtransferase
TusA family
Hemerythrin
family
(Hemerythrin
HHE cation
binding domain)
Ribosome
binding protein
Y (YfiA
homologue)
family
No result
FMN-linked
tRNA-
LAM_1 family
Cluster145561
SirA_YedF Metal_YeeD
binding
Superfamily
(Hypothetic
al protein
yeeD)
ClusterHemerythri All DNA125947
n-like
binding
Superfamily
(Methylaccepting
chemotaxis
protein
mcpB)
ClusterNo result
No result
120058
(Prokaryotic
membrane
lipoprotein lipid
attachment site
motif)
(Protein
HI0246
precursor)
Ribosomal_S30
AE family
Cluster150719
RaiA
superfamily
Sodiumbinding
Dus family
(Sigma-54
modulation
protein)
Cluster-
TIM_phosp
EC 3.5.-.-:
Protein of
unknown
function
DUF331
Cluster
4048585
SirA-like
Cluster
4146242
Haemerythr
in/HHE
cationbinding
motif
Cluster
3854887
Uncharacte
rised
conserved
protein
UCP02077
2
Cluster
3863398
Keyword
9863
Cluster
61
62
63
64
P43975
P44609
P43980
P43982
phosphoribo
syl)-5-[(5phosphoribo
sylamino)m
ethylidenea
mino] -like
domain
family
Phosphogly
cerol
transferase I
-like domain
family
oxidoreductases
family
Dihydrouridi
ne synthase
family
Arylsulfatase
family
No result
UPF0225
protein
MCA2786 like domain
family
SEC-C
associated
NTF2-like
domain
family/Sec-C
motif family
VC0467-like
family
UPF0301
protein
MCA2336 2
-like domain
family
No result
No result
No result
147656
Sulfatase family
SEC-C family
Uncharacteri
zed protein
YQGE
family
DUF179 family
No result
MarB protein
family
hate_bindin Hydrolases g
Acting on
(TIM barrel Superfamily Carbonproteins )
Nitrogen
Bonds, other
than Peptide
Bonds
4154178
TRNAdihydrourid
ine
synthase
Cluster151986
Sulfatase
Transmembr
Superfamily ane
Cluster
4276704
Sulfatase
(putative
integral
membrane
protein )
Cluster147600
SEC-C
superfamily
Zinc-binding
Cluster
4127137
SEC-C
motif
TC 2.A.1
Major
facilitator
family
(MFS)
Cluster
4164891
Protein of
unknown
function
DUF179
Cluster
4596145
Proteobacte
ria
(Hypothetic
al protein
HI0277)
ClusterDUF179
151233
superfamily
(transcripti
onal
regulator )
Cluster97759
(Merozoite
surface
protein-3)
No result
Transmembr
ane
65
P44634
UPF0082
YebC-like
protein
family
At2g25830 like domain
family
Uncharacteri
zed family
Transcrip_reg
family
66
P43984
No result
No result
No result
Isoprenylcystein
e carboxyl
methyltransferas
e
(ICMT) family
67
P44640
No result
No result
No result
Na_H_antiport_
2 family
68
P43987
No result
MW0975(SA094 No result
3)-like family
69
P44641
L-lysine
MoCo
lysine 2,3-
Cluster152835
(Glucose-1phosphate
adenylyltra
nsferase)
ClusterPEMT
146292
superfamily
Cluster
4120159
Protein of
unknown
function
DUF28
Cluster
3831400
Protein-S(Farnesyl
isoprenylcy
cysteine
steine Ocarboxylmethyltrans
methyltrans
ferase
ferase)
activity
ClusterNa_H_antip TC 2.A.
Cluster
149200
ort_2
Electrochemi 3390635
Superfamily cal Potential- Na+/H+
(Putative
driven
antiporter
integral
transporters - NhaC-like
membrane
Porters
protein)
(uniporters,
symporters,
antiporters)
priB_priC family Cluster156082
Fer4_14 family
Transcrip_r All lipideg
binding
Superfamily proteins
(Primosom
al
replication
protein N)
Cluster-
Transmembr
ane
priB_priC
superfamily
No result
Cluster
4045251
Pasteurellal
es
Radical_SA
Iron-binding
Cluster
70
71
72
73
74
P44646
P44649
P24324
Q57065
P43989
2,3aminomutas
e -like
domain
family
biosynthesis
proteins family
No result
No result
No result
No result
aminomutase
like family
Transmembr
ane protein
family
No result
uncharacteri
sed family
154 -like
domain ½
family
Alpha-2,3/8sialyltransferase
CstII family
No result
SinR domainNo result
like family
(lambda
repressor-like
DNA-binding
domains
superfamily)
Tetratricopeptide No result
Receptor-
No result
133235
Lig_chan family
(Ligand-gated
ion channel)
Dehydratase_he
m family
CST-I family
HTH_25 family
(Helix-turn-helix
domain)
TPR_21 family
(L-lysine
2,3aminomuta
se)
Cluster140871
(Putative
transport
protein)
Cluster128738
(splicing
factor like
protein )
Cluster142738
(Alpha-2,3sialyltransf
erase)
Cluster150265
(Putative
DNAbinding
protein)
Cluster-
M
Superfamily
4031921
Protein of
unknown
function
DUF160
yhhT
Transmembr
Superfamily ane
(Predicted
permease)
Cluster
4138321
Uncharacte
rised
protein
family
UPF0118
Cluster
4074320
Protein of
unknown
function
DUF469
Cluster
4094607
Alpha2,3/8sialyltransf
erase CstII
Cluster
4174733
Helix-turnhelix type 3
DUF469
Zinc-binding
Superfamily
,Sulfotransf
er_3
Superfamily
CST-I
Lipoprotein
Superfamily
HTH_XRE All lipidSuperfamily binding
proteins
TPR
All lipid-
Cluster
75
P44668
76
P44670
associated
repeat (TPR)
protein of
family
the synapse
-like domain
½ family
uncharacteri IscX-like family
sed family
163 -like
domain
No result
SMI1/KNR4like family
144927
No result
Fe-S_assembly
family
No result
DUF2625 family Cluster133422
P44672
Iron-sulfur
HesB-like
cluster
domain family
insertion
protein erpA
-like domain
family
FeS cluster
assembly
protein
family
Fe-S_biosyn
family
78
P44675
HTH-type
transcription
al regulator
NsrR -like
domain
family
RNA
(cytidine/uri
dine-2'-O-)methyltransf
No result
Rrf2 family
79
P44676
SpoU-like RNA
2'-O ribose
methyltransferas
e family
4156687
Tetratricop
eptide-like
helical
FeS_assembly
superfamily
Cluster
4639845
Hypothetic
al protein
yfhj
(Colicin
protein)
77
Z-DNA binding
domain family
Superfamily binding
proteins
RNA
methyltransf
erase family
SpoU rRNA
Methylase
family
Cluster156071
(FeS
cluster
assembly)
Zinc-binding
DUF2625
All lipidSuperfamily binding
proteins
(Hypothetic
al protein)
ClusterFeIron-binding
145453
S_biosyn
superfamily
(Iron-sulfur
cluster
assembly
protein)
ClusterRrf2
Zinc-binding
139965
Superfamily
(transcripti
onal
regulator)
Cluster149834
SpoU_meth EC 2.1.-.-:
ylase
Transferases
Superfamily (tRNA/rRN
Transferring
Cluster
3836505
Bacteria
Cluster
4138459
FeS cluster
insertion
Cluster
4164851
Transcripti
onal
regulator,
Rrf2
Cluster
4156967
RNA
methyltrans
80
P44679
81
P43990
82
P43992
83
84
P43994
P44683
erase -like
domain
family
1,4dihydroxy2naphthoylCoA
hydrolase like domain
family
Acetate
kinase -like
domain ½
family
4HBT-like
family
(Thioesterase/thi
ol ester
dehydraseisomerase
superfamily)
Family not
named
Thioesterase
superfamily
YeaZ-like family
(Actin-like
ATPase
domainsuperfam
ily)
oGlycoprotease
sialoglycopro family
tein
endopeptidas
e family
Rhamnogala
cturonan
acetylestera
se -like
domain
family
Rhamnogalactur
onan
acetylesterase
family
(SGNH
hydrolase
superfamily)
No result
uncharacteri
sed family
256 -like
domain
MoaD/ThiS
superfamily
No result
Lysine-
Asparaginyl
No result
RnfH family
Ubiquitin
A
One-Carbon
methyltrans
Groups
ferase)
Clusterhot_dog
Zinc-binding
149566
Superfamily
(4hydroxyben
zoyl-CoA
thioesterase
)
ClusterCOG1214
143405
Superfamily
(Glycoprot
ein
endopeptid
ase)
ClusterNo result
93419
(Putative
transcriptio
nal
regulatory
protein)
Cluster155495
EC 3.4.-.-:
Hydrolases Acting on
peptide
bonds
(Peptidases)
All lipidbinding
proteins
Ub-RnfH
SodiumSuperfamily binding
(Protein
rnfH)
mina53 (myc
Cupin
Cluster-
Cupin_2
EC 3.1.-.-:
ferase
TrmH,
group 1
Cluster
4145117
4hydroxyben
zoyl-CoA
thioesterase
Cluster
4162826
Peptidase
M22,
glycoprotea
se
Cluster
4167654
Acyltransfe
rase 3
Cluster
4150562
(Uncharact
erised
protein
family
UPF0125)
Cluster
specific
demethylase
NO66 -like
domain ½
family/
85
86
87
P44684
P44686
P44691
hydroxylase-like
family
(Clavaminate
synthase-like
superfamily)/
Dachshund like domain Dachshundfamily
homology
domain family
(Putative DNAbinding
domainsuperfam
ily)
RNA
MutT-like
pyrophosph family (Nudix
ohydrolase - superfamily)
like domain
family
UPF0234
protein
Rv0566c/M
T0592 -like
domain
family
No result
Vitamin
B12 import
system
permease
ABC transporter
involved in
vitamin B12
uptake, BtuC
induced
nuclear
antigen)
family
superfamily
protein
150111
(Mina53)
udp/adpNUDIX family
sugar
pyrophosphat
ase family
Cluster
147294
No result
Cluster94128
ABCtransporter
metalbinding
DUF406 family
ABC 3 transport
family
(Pyrophosp
hohydrolas
e)
(Similar to
Ikaros/Heli
os
(Fragment)
)
Cluster149307
(ABC
Superfamily Hydrolases Acting on
Ester Bonds
3887799
Cupin 4
Nudix_Hyd EC 3.6.-.-:
rolase
Hydrolases Superfamily Acting on
Acid
Anhydrides
Cluster
4127686
Nucleoside
diphosphat
e
pyrophosph
atase
Cluster
4482597
Conserved
hypothetica
l protein
CHP00743
DUF406
superfamily
EC 2.4.-.-:
Transferases
Glycosyltran
sferases
TM_ABC_i
ronsiderophore
s_like
Transmembr
ane
Cluster
4098632
ABC 3
88
89
90
91
92
P44693
Q57392
P43995
P44702
P44709
protein
BtuC -like
domain
family
Lipoprotein
-like domain
family
Outer
membrane
protein -like
domain
family
Sodium/pot
assiumtransporting
ATPase
subunit
gamma -like
domain
family
tRNA
(adenineN(6)-)methyltransf
erase -like
domain
family
uncharacteri
sed family
27 -like
family
protein
family
Peptidoglycan
hydrolase LytM
family
(Duplicated
hybrid motif
superfamily)
Outer membrane
protein family
Peptidaserelated
family
Ribbon-helixhelix
superfamily
No result
No result
Peptidase family
M23
Opacity family
transporter)
Superfamily
Cluster138457
Peptidase_
EC 3.4.-.-:
M23
Hydrolases Superfamily Acting on
peptide
bonds
(Peptidases)
OMP_b-brl Photosynthe
Superfamily sis
Cluster
4184571
Peptidase
M23B
DUF1778
superfamily
Cluster
4095373
Protein of
unknown
function
DUF1778
(Peptidase,
M23/M37
family)
Cluster150900
Opacity
protein
DUF1778 family Cluster152250
(Putative
helix-turnhelix
protein)
N5-glutamine
methyltransferas
e, HemKfamily
Methyltransf
erase family
Methyltransf_26
family
Cluster145157
(Omethyltrans
ferase)
No result
No result
DUF416 family
Cluster133516
EC 4.1.-.-:
Lyases CarbonCarbon
Lyases
Cluster
3846753
Opacity
AdoMet_M EC 3.1.-.-:
Tases
Hydrolases Superfamily Acting on
Ester Bonds
Cluster
4119785
Methyltran
sferase
small
DUF416
superfamily
Cluster
3848570
Protein of
All DNAbinding
domain
family
93
P31777
94
P44711
95
P43997
96
97
P43998
P44717
Ribosomal
RNA small
subunit
methyltransf
erase G like domain
family
UPF0133
protein
Rv3716c/M
T3819 -like
domain
family
No result
No result
KpsF
protein -like
domain ½
family/
UDP-Nacetylenolp
yruvoylgluc
(Hypothetic
al protein )
S-adenosyl-Lmethioninedependent
methyltransferas
es superfamily
No result
YbaB-like
family
No result
No result
Ribosomal RNA
small subunit
methyltransferas
e D, RsmJ
family
Cluster152634
No result
YbaB/EbfC
DNA-binding
family
Cluster152197
(YbaB
protein)
YbaB_DNA All lipid_bd
binding
Superfamily proteins
Cluster
4110991
Keyword
10025
No result
LPAM_1 family
Cluster120106
No result
All lipidbinding
proteins
Cluster
3988855
Pasteurellal
es
Lipoyl
Cluster
3948648
Proteobacte
ria
No result
CorC/HlyC
Hemolysindomain-like
related
family (FADfamily
binding/transport
er-associated
domain-like
superfamily)/
No result
CBS family
(Cystathionine
beta synthase)
No result
DNA repair
unknown
function
DUF416
Cluster
3854691
Protein of
unknown
function
DUF519
(Florfenicol
resistance
protein)
(Hypothetic
al protein)
ClusterNo result
145440
(fucosyltra
nsferase)
Cluster143846
(Hemolysin
protein)
CBS_pair
Transmembr
Superfamily ane
Cluster
4144744
Transporter
-associated
region
98
99
100
101
102
P43999
P44718
P44720
Q57144
P44000
osamine
reductase like domain
family
No result
Deoxyribon
uclease
TatD -like
domain
family
Zinc finger
protein 425
-like domain
family
No result
RNA-
CBS-domain
pair family
No result
TatD Mgdependent
DNase-like
family
(Metallodependent
hydrolases
superfamily)
No result
No result
Aminomethyltra
No result
Tatd family
deoxyribonu
clease
DUF1523 family Cluster140145
TatD_DNase
family
(ABC
transporter
subunit)
Cluster149137
(Hydrolase,
TatD
family)
Uncharacteri
zed family
No result
Uncharacteri
YceG-like
family
UreF family
GCV_T
Cluster152447
(Aminodeo
xychorisma
te lyase
(PABC))
Cluster155241
(VirK
virulence
protein)
Cluster-
DUF1523
superfamily
Transmembr
ane
metalloNo result
dependent_
hydrolases
Superfamily
YceG-like
family
superfamily
Zinc-binding
DUF535
Iron-binding
Superfamily
/ANK
Superfamily
ygfZ_signat
DNA repair
Cluster
3869536
Protein of
unknown
function
DUF1523
Cluster
4150200
Deoxyribon
uclease,
TatD Mgdependent
Cluster
4125861
Aminodeox
ychorismat
e lyase
Cluster
4047417
Protein of
unknown
function
DUF535
Cluster
modifying
nsferase folateprotein ygfZ binding domain
-like domain family
family
zed family
family
103
P44726
No result
No result
Uncharacteri
zed family
YicC-like family
104
P44003
Betaglucoside
operon
antiterminat
or -like
domain ½
family
No result
PTS-regulatory
domain, PRD
family
No result
PRD family
105
106
P44005
O05023
Nucleic acid
binding
protein -like
domain
family
No result
Retroviral
integrase,
catalytic domain
family
(Ribonuclease
H-like
superfamily)
No result
SNARE_assoc
family
Ferrichrome rve_3 family
iron receptorrelated
family
144469
ure
Superfamily
(aminomet /GCV_T_C
hyltransfera Superfamily
se)
ClusterYicC_N
Structural
148892
Superfamily protein
(Matrix
(stressprotein,Core
induced
protein,Viral
protein)
occlusion
body,Keratin
)
ClusterNo result
Nuclear
146476
Receptors
(26S
proteasome
regulatory
subunit)
Cluster141550
(Alkaline
phosphatas
e)
Cluster142960
(Transposa
se)
SNARE_ass Transmembr
oc
ane
Superfamily
4142011
Folatebinding,
YgfZ
Cluster
4144576
Region of
unknown
function
DUF1732
Cluster
3622930
PTSregulatory
domain,
PRD
Cluster
4334463
SNARE
associated
Golgi
protein
rve
DNA
Cluster
Superfamily recombinatio 4067283
n
Integrase,
catalytic
core
107
P44733
No result
Myosin rod
DNA
fragments family recombinatio
n protein
rmuc family
RmuC family
108
P44010
No result
No result
No result
UPF0114 family
109
P44740
Nefassociated
protein 1 like domain
family
YaeB-like
family
Uncharacteri
zed family
UPF0066 family
110
P44743
ncharacteriz
ed protein
HI_0520 like domain
family
MoCo
biosynthesis
proteins family
(Radical SAM
enzymes
superfamily)
Pyruvate
formatelyaseactivating
enzyme
family
Fer4_12 family
111
P44744
Formate
PFL-like family
No result
Rad17 family
Cluster147263
RmuC
All DNASuperfamily binding
(DNA
recombinati
on protein
rmuC
homolog)
ClusterUPF0114
133284
Superfamily
/ AAA
(transmemb Superfamily
rane )
EC 2.4.-.-:
Transferases
Glycosyltran
sferases
Cluster
4170267
RmuC
Cluster
4036464
Uncharacte
rised
protein
family
UPF0114
ClusterUPF0066
EC 2.5.-.-:
Cluster
143774
Superfamily Transferases 4130990
Uncharacte
(Formylmet
Transferring rised
hanofuran
Alkyl or
protein
dehydrogen
Aryl Groups, family
ase)
Other than
UPF0066
Methyl
Groups
ClusterRadical_SA Iron-binding Cluster
146582
M
4152683
Superfamily
(Pyruvate
formatelyase 2
activating
enzym)
ClusterPFL
Iron-binding Cluster
112
Q57256
acetyltransf
erase -like
domain
family
(PFL-like glycyl
radical enzymes
superfamily)
No result
No result
156410
(Yjji
protein)
No result
Uncharacterized
BCR, YitT
family
Cluster151901
Superfamily
(Pyruvate
formate
lyase)
No result
Transmembr
ane
(YCZE
protein)
113
114
115
P44012
P44013
P44014
Ribonucleas
e -like
domain
family
Ribonuclease
Rh-like family
No result
No result
Transposase
for insertion
sequence
element
IS200 -like
domain
Transposase
IS200-like
family
Ribonuclease Ribonuclease T2
T2 family
family
No result
No result
G6PD_bact
family
Y1_Tnp family
Cluster150158
(Ribonucle
ase T2
family)
Cluster142546
(Sugar
ABC
transporter,
sugarbinding
protein)
Cluster45444
(Putative
glycosyl
transferase)
RNase_T2
All lipidSuperfamily binding
proteins
4053911
Glycyl
radical
enzyme,
HI0521,
predicted
Cluster
4161004
Protein of
unknown
function
DUF161
Cluster
4158722
Ribonuclea
se Rh;
Chain A
G6PD_bact Zinc-binding
Superfamily
Cluster
3854686
Bacteria
Y1_Tnp
EC 2.7.-.-:
Superfamily Transferases
Transferring
PhosphorusContaining
Cluster
3969029
Complete
proteome
116
117
118
119
120
Q57409
O86226
P44016
P44754
P44759
family
No result
No result
No result
30S
ribosomal
protein S4 like domain
family
No result
No result
No result
Heat shock
protein 15 kD
family
(Alpha-L RNAbinding motif
superfamily)
Fusion
Fibrinogen
glycoprotein coiled-coil and
F0 -like
central regions
domain
family
No result
No result
Family not
named
DUF1304 family Cluster156164
No result
OPT family
RNA
pseudouridyl
ate synthase
family
protein
S4 family
No result
MerR-DNAbind family
DUF1304
superfamily
Groups
All lipidbinding
proteins
(transmemb
rane
protein )
ClusterNo result
95821
(Putative
sugar
transporter)
Cluster142428
(Oligopepti
de
transporter,
OPT
family)
Cluster148435
EC 1.9.-.-:
Oxidoreduct
ases - Acting
on a heme
group of
donors
OPT
Transmembr
Superfamily ane
(SlyX)
Cluster
4106511
Oligopeptid
e
transporter
OPT
S4
RNASuperfamily binding
Proteins
Cluster
4003495
RNAbinding S4
SlyX
TC 1.C.
Superfamily Channels/Po
res - Poreforming
Cluster
4338006
SlyX
(Heat
shock
protein 15)
Cluster150246
Cluster
4069446
Protein of
unknown
function
DUF1304
Cluster
4046743
Haemophil
us
family
121
122
123
124
125
P44761
P44017
P44018
P44019
P44023
No result
No result
No result
HTH_22 family
Sulfurtransf DsrH-like family No result
erase TusD
-like domain
family
DsrH family
No result
DcuC family
No result
No result
Amidase
signature (AS)
enzymes family
No result
No result
No result
No result
Ammonia
monooxygenase
AMO family
Solute carrier DcuC family
family 13
member
Cluster138232
(Twocomponent
sensor
histidine
kinase)
Cluster156157
(DsrH
protein )
Cluster149198
toxins
(proteins and
peptides)
PAS_6
All lipidCluster
Superfamily binding
4245364
proteins
YheO-like
DsrH
TC 3.A.1
Superfamily ATP-binding
cassette
(ABC)
family
DcuC
Transmembr
Superfamily ane
(C4dicarboxyla
te
transporter)
ClusterDc-C
Transmembr
149198
Superfamily ane
(C4dicarboxyla
te
transporter)
ClusterCOG1288
Transmembr
147973
Superfamily ane
Cluster
3815209
Sulphur
relay,
TusB/DsrH
Cluster
4107702
C4dicarboxyla
te
anaerobic
carrier-like
Cluster
4041962
Haemophil
us
influenzae
Cluster
4117458
C4-
126
127
128
129
P44771
P44782
P44025
P44026
Phosphogly
colate
phosphatase
-like domain
family/
Predicted
hydrolases Cof
family
(HAD-like
superfamily)
HMP-PP
phosphatase
-like domain
family
No result
Pseudouridine
synthase
RsuA/RluD
family
Succinate
dehydrogen
ase
assembly
factor 2, like domain
family
Chloride
channel
protein -like
YgfY-like
family
family
(Transporte
r)
Phosphoserin Hydrolase_3
e
family
phosphatase
family
Cluster139306
RNA
pseudouridyl
ate synthase
family
protein
PseudoU_synth_
2
Cluster137915
No result
Sdh5 family
HAD_like
All lipidSuperfamily binding
proteins
(Hydrolase)
PseudoU_sy Iron-binding
nth
Superfamily
(Ribosomal
large
subunit
pseudouridi
ne synthase
A)
ClusterSdh5
Sodium150151
Superfamily binding
dicarboxyla
te
anaerobic
carrier-like
Cluster
4086008
HAD
superfamily
hydrolaselike, type 3
Cluster
4188164
Pseudouridi
ne
synthase,
RsuA and
RluB/C/D/
E/F
Cluster
4162414
Ygfy
(Ygfy)
Clc chloride
channel family
Chloride
channel
family
Voltage_CLC
family
Cluster141500
Voltage_gat Transmembr
ed_ClC
ane
Superfamily
Cluster
3520476
Chloride
domain
family
130
131
132
133
134
P44027
P44796
P44028
P44807
P46494
UPF0234
protein
Rv0566c/M
T0592 -like
domain
family
High
frequency
lysogenizati
on protein
HflD -like
domain
family
No result
tRNA
threonylcarb
amoyladeno
sine
biosynthesis
-like domain
family
DNA
topoisomera
se -like
domain
Integrin beta tail
domain family
No result
YcfC-like family No result
Integrin_B_tail
family
Golgin
subfamily A
member 5
(Chloride
channel
protein)
Cluster151454
(Capsid
scaffolding
protein)
Cluster156056
transport
PBPb
Superfamily
(Bacterial
periplasmic
transport
systems)
DUF489
Superfamily
All lipidbinding
proteins
Transmembr
ane
Cluster
4141960
Conserved
hypothetica
l protein
CHP00743
Cluster
3916515
YcfC-like
(ycfC
protein)
No result
No result
YrdC-like family SUA5 family
PhnA zincbinding domain
family/
Prokaryotic
dna
topoisomeras
e family
Prokaryotic
membrane
lipoprotein lipid
attachment site
LPAM_1 family
Cluster156185
Sua5_yciO_yrd
C family
Cluster145750
DUF1375
Photosynthe
Superfamily sis
(lipoprotein
)
Sua5_yciO_ RNAyrdC
binding
Superfamily Proteins
(Sua5/YciO
/YrdC
family
protein)
zf-C4_Topoisom ClusterTOPRIM
Zinc-binding
family
144826
Superfamily
(DNA
Cluster
4094730
Protein of
unknown
function
DUF1375
Cluster
4038495
Sua5/YciO/
YrdC, Nterminal
Cluster
4554047
Prokaryotic
type I DNA
1/2/3 family
135
136
P44031
P44033
No result
No result
Prokaryotic
DNA
topoisomerase I,
a C-terminal
fragment family
Glu-tRNAGln
amidotransferase
C subunit family
No result
topoisomer
ase I)
No result
No result
No result
Gp49 family
HipA_N family
137
P44034
No result
No result
138
O86228
DNAbinding
protein -like
domain
family
ambda repressor- No result
like DNAbinding domains
superfamily
HTH_3 family
139
P44812
No result
Tropomyosin
family
Nucleopolyhedr
ovirus P10
protein
No result
Couple_hipA
family
Cluster156920
(putative
phage
protein )
Cluster156136
(Protein
hipA)
Cluster154923
topoisomer
ase
Gp49
mRNASuperfamily binding
Proteins
HipA_N
Zinc-binding
Superfamily
/ HipA_C
Superfamily
Couple_hip Iron-binding
A
Superfamily
Cluster
4727452
Protein of
unknown
function
DUF891
Cluster
4088874
HipA-like,
N-terminal
Cluster
4033498
HipA, N(ComK)
terminal
ClusterHTH_XRE TC 9.A.
Cluster
145529
Superfamily Incompletely 3898899
Characterize Helix-turn(Transcripti
d Transport
helix type 3
onal
Systems regulator,
Recognized
Hth-3
transporters
family)
of unknown
biochemical
mechanism
ClusterDUF904
All lipidCluster
138169
Superfamily binding
4106976
proteins
Protein of
140
P44036
Mycothiol
acetyltransf
erase -like
domain
1/2/3 family
141
P71356
No result
142
143
P44037
P44827
No result
No result
NPV_P10 family (A kinase
anchor
protein)
N-acetyl
N-terminal
Acetyltransf_1
Clustertransferase, NAT acetyltransfer family
146722
family
ase family
(Acetyltran
sferases)
Multidrug
Family not
resistance efflux named
transporter EmrE
family
EamA-like
transporter
family
Peptide
methionine
sulfoxide
reductase family
No result
PAS_7 family
Pseudouridine
synthase
RsuA/RluD
family
Ribosomal
large subunit
pseudouridin
e synthase
bfamily
Cluster144807
No result
Iron-binding
No result
Transmembr
ane
No result
EC 3.1.-.-:
Hydrolases Acting on
Ester Bonds
(Integral
membrane
domain
protein)
Cluster19036
(hypothetic
al protein )
PseudoU_synth_
2 family
Cluster141200
(Ribosomal
large
subunit
pseudouridi
ne synthase
B)
PseudoU_sy rRNAnth
binding
Superfamily Proteins
unknown
function
DUF904
Cluster
4032240
Nacetyltransf
erase
activity
Cluster
4048630
Protein of
unknown
function
DUF6,
transmembr
ane
Cluster
3826314
NAD(P)binding
Rossmannlike
Domain
Cluster
4152309
Pseudouridi
ne
synthase,
RsuA and
RluB/E/F
144
145
146
147
148
Q57523
P44038
P44831
P44040
P71357
No result
No result
Outer
membrane
protein
assembly
factor yaeT
-like domain
family
Regulator of
ribonuclease
activity B like domain
family
No result
No result
No result
No result
Hypothetical
protein VC0424
family
No result
Family of
unknown
function
(DUF490)
Sorting and
assembly
machinery
(sam50)
protein
family
Bac_surface_Ag
family
No result
RraB family
Cluster143388
(Putative
signal
peptide
protein)
Cluster141007
DUF490
All lipidSuperfamily binding
proteins
Cluster
4141982
Protein of
unknown
function
DUF490
Bac_surface Zinc-binding
_Ag
Superfamily
Cluster
4169983
Bacterial
surface
antigen
(D15)
PRK11191 MetalSuperfamily binding
Cluster
3797359
Uncharacte
rised
conserved
protein
UCP01819
3
Cluster
3904479
Pasteurellal
es
(outer
membrane
protein)
Cluster155971
(yjgD
protein)
No result
No result
No result
LPAM_1 family
RelB family
Cluster152724
No result
Nickelbinding
(utative
lipoprotein)
ClusterRelB
All lipid150903
Superfamily binding
proteins
(Damageinducible
protein
Cluster
4023654
RelB
antitoxin
149
150
151
152
153
P44041
P44839
P44842
P44844
P44043
No result
RelE-like family
No result
Plasmid_stabil
family
DinJ)
Cluster119867
(Capsid
assembly
protein)
Cluster141110
RutC family YjgF/L-PSP
protein yjgF family
-like domain
family
Translation
initiation
inhibitor
family
Ribonuc_L-PSP
family
Elongation
factor G like domain
family
Impactrelated
family
UPF0029 family
No result
No result
YigZ N-terminal
domain-like
family
(Ribosomal
protein S5
domain 2-like
superfamily/
EF-G C-terminal
domain-like
superfamily)
No result
No result
(Probable
translation
initiation
inhibitor)
Cluster146637
COG3041
Repressor
Superfamily
YjgF_YER All lipid057c_UK11 binding
4_family
proteins
Superfamily
UPF0029
superfamily
Zinc-binding
(Proline
dipeptidase
)
No result
No result
YihI family
Cluster156394
(putative
coproporph
yrinogen
III oxidase)
DUF2489 family Cluster156197
Cluster
4099600
Addiction
module
toxin,
RelE/StbE
Cluster
4195840
Endoribonu
clease LPSP
Cluster
4126851
Uncharacte
rised
protein
family
UPF0029
YihI
MetalSuperfamily binding
Cluster
4040724
Protein of
unknown
function
DUF414
DUF2489
superfamily
Cluster
4020603
Transmembr
ane
154
155
P44045
P44047
No result
No result
No result
No result
No result
No result
156
P44854
Centrosoma
l protein of
41 kDa -like
domain
family
Single-domain
sulfurtransferase
family
Family not
named
157
P44863
Polysacchar
ide
deacetylase
-like domain
family
Divergent
polysaccharide
deacetylase
family
Uncharacteri
zed yibqrelated
No result
No result
(putative
coproporph
yrinogen
III oxidase)
Cluster155912
(DNAbinding
protein
UL42)
Cluster142291
Domain of
unknown
function
DUF2489
No result
Photosynthe
sis
Cluster
4138486
Multicoppe
r oxidase,
type 2
NADB_Ros Zinc-binding
smann
Superfamily
Cluster
3507333
Haemophil
us
influenzae
(nucleoside
diphosphat
e-sugar
epimerases)
Rhodanese
ClusterRHOD
All lipidfamily
143086
Superfamily binding
proteins
(Rhodanese
-related
sulfurtransf
erase)
Polysacc_deac_2 ClusterCE4_SF
EC 3.4.-.-:
family
133511
Superfamily Hydrolases Acting on
(YibQ)
peptide
bonds
(Peptidases)
Cluster
4116016
Oxidized
Rhodanese;
domain 1
Cluster
4078228
Protein of
unknown
function
DUF610,
158
159
160
P44864
P44048
P44050
161
P44869
162
P44052
Lipoprotein Peptidoglycan
-like domain hydrolase LytM
family
family
Probable
Fe(2+)trafficking
protein -like
domain
family
Doublestrand break
repair
protein
MRE11 like domain
family
Ribosomal
RNA small
subunit
methyltransf
erase D like domain
family
No result
YggX-like
family
Peptidaserelated
family
No result
Peptidase_M23
family
Cluster139239
Iron_traffic
family
(Peptidase,
M23/M37
family)
Cluster156159
Peptidase_
Zinc-binding
M23
Superfamily
YibQ
Cluster
4145059
Peptidase
M23B
Bacterial
Fe(2+)
trafficking
Cluster
4093460
YggX-like
Iron-binding
(Protein
yggX)
Metallodependent
phosphatases
superfamily
No result
Metallophos_2
family
Cluster87121
MPP_superf Iron-binding
amily
Superfamily
Cluster
4733582
Metallopho
sphoesteras
e
S-adenosyl-Lmethioninedependent
methyltransferas
es superfamily
Methyltransf
erase family
Cons_hypoth95
family
Cluster142947
AdoMet_M EC 2.1.-.-:
Tases
Transferases
Superfamily (Methyltran
Transferring
sferase)
One-Carbon
Groups
Cluster
4136223
Conserved
hypothetica
l protein
CHP00095
DBL homology
domain (DHdomain) family
No result
No result
Cluster112385
Cluster
3971366
Complete
proteome
(Phosphoes
terase)
(Ser/Thr
protein
kinase)
No result
Lipoprotein
163
164
165
P44053
P44054
P44882
cAMPcAMP-binding
dependent
domain family
protein
kinase
regulatory
subunit -like
domain ½
family
No result
No result
No result
Family not
named
cNMP_binding
family
Cluster143194
CAP_ED
MetalSuperfamily binding
Cluster
3773754
Cyclic
nucleotidebinding
No result
Cluster
3598299
Protein of
unknown
function
DUF81
Cluster
3976330
Uncharacte
rised
protein
family
UPF0149
Cluster
3946111
Uncharacte
rised
protein
family
UPF0259
Cluster
3929807
Thioesteras
e
superfamily
(Transcripti
onal
activator,
CrP family)
Transmembr
ane protein
YFCA
family
YgfB-like family No result
TauE family
TerB-N family
Cluster150623
(Integral
membrane
protein)
Cluster156212
Metalbinding
UPF0149
All lipidSuperfamily binding
proteins
(ygfB)
166
167
P44056
P44886
No result
Acylcoenzyme A
thioesterase
11 -like
domain ½
No result
Thioesterase/thio
l ester
dehydraseisomerase
superfamily
No result
Cytosolic
acyl
coenzyme a
thioester
hydrolase
Yip1 family
(Golgi vesicular
transport
protein)
Cluster80365
Thioesterase
superfamily
Cluster147823
No result
Transmembr
ane
(Cytochro
me oxidase
II)
(Acyl-CoA
hydrolase)
hot_dog
EC 3.1.-.-:
Superfamily Hydrolases Acting on
Ester Bonds
168
169
P44897
P44898
family
uncharacteri
sed family
67 -like
domain
YejL-like family
family
No result
Na_H_antiport_
2 family
Inner
membrane
protein
yejM -like
domain
family
Alkaline
phosphatase
family
Arylsulfatase
family
Sulfatase family
P44058
Cytosine
deaminase like domain
family
Cytosine
deaminase
catalytic domain
family
Family not
named
CutC family
171
P44059
Dihydroorot
ase -like
domain 2
family
No result
No result
No result
No result
No result
P44900
DUF1414
All DNASuperfamily binding
(yejL like )
170
172
Cluster152675
No result
SEN1_N family
(helicase Sen1 is
an RNA
polymerase II
termination
Cluster151985
Sulfatase
Transmembr
Superfamily ane
/ DUF3413
Superfamily
(hydrolase
of alkaline
phosphatas
e
superfamily
)
ClustermetalloIron-binding
148111
dependent_
hydrolases
(Ammelide Superfamily
aminohydr
olase)
ClusterNo result
No result
111725
(GTPase
activator )
Cluster135315
(YIHD)
DUF1040
CalciumSuperfamily binding
Cluster
4020600
Uncharacte
rised
protein
family
UPF0352
Cluster
3463167
Membrane
sulfatase,
HI0842related
Cluster
3692882
Haemophil
us
Cluster
3667317
Nocardiops
aceae
Cluster
3673366
Protein of
unknown
function
173
174
175
176
177
P31811
P44903
P44904
P44062
P44905
No result
No result
No result
factor)
Nucleolar RNAbinding protein,
Nop10p family
Cluster156393
(Putative
LysR type
transcriptio
nal
regulator
with pssR)
Cluster140481
DUF413
DNA repair
Superfamily
Putative
multidrug
resistance
protein
MdtD -like
domain
family
LacY-like
Major
proton/sugar
facilitator
symporter family superfamily
domaincontaining
proteinrelated
family
Major Facilitator
Superfamily
No result
No result
SDH_alpha
family
(Serine
dehydratase
alpha chain)
Cluster156227
ZapA family
Cluster136610
ZapA
Transmembr
Superfamily ane
(Kinectin
(Fragment)
)
Cluster-
COG0212
No result
Lactate
Cell division
protein ZapAlike family
Methenyltetrahy
Uncharacteri
zed family
No result
ATPase
(Multidrug
resistance
protein)
5-
MFS
TC 2.A.
Superfamily Electrochemi
cal Potentialdriven
transporters Porters
(uniporters,
symporters,
antiporters)
SDH_alpha MetalSuperfamily binding
(inner
membrane
protein)
Repressor
DUF1040
Cluster
4034123
Protein of
unknown
function
DUF413
Cluster
4109456
Drug:hydro
gen
antiporter
activity
Cluster
4318831
Uncharacte
rised
protein
family
UPF0597
Cluster
4068282
Cell
division
protein
ZapA-like
Cluster
utilization
protein B like domain
family
drofolate
synthetase
family
inhibitor/5formyltetrah
ydrofolate
cyclo-ligase
family
formyltetrahydro
folate cycloligase family
178
P44908
No result
No result
No result
YhhQ family
179
P44063
Lipopolysac
charide
biosynthesis
protein -like
domain
family
Bacterial
polysaccharide
co-polymeraselike family
No result
Baculo_E56
family
180
Q57022
Polypeptide
Nacetylgalact
osaminyltra
nsferase 1 -
Nucleotidediphospho-sugar
transferases
superfamily
Glycosyltran
sferase
family
Glycosyl
transferase
family 2
150145
Superfamily
4172270
5(5formyltetra
formyltetra
hydrofolate
hydrofolate
cyclocycloligase
ligase)
activity
ClusterDUF165
TC 2.A.
Cluster
156383
Superfamily Electrochemi 4290160
cal Potential- Protein of
(Transporte
driven
unknown
r)
transporters - function
Porters
DUF165
(uniporters,
symporters,
antiporters)
ClusterNo result
Transmembr Cluster
148453
ane
4119936
Lipopolysa
(Chain
ccharide
length
biosynthesi
determinant
s
protein
(Polysacch
aride
antigen
chain
regulator))
ClusterGlyco_tranf EC 2.4.-.-:
Cluster
139894
_GTA_type Transferases 4204043
Superfamily Glycosyl
(Glycosyl
Glycosyltran transferase,
transferase)
sferases
family 2
181
182
P44064
P44065
like domain
family
Polypeptide
Nacetylgalact
osaminyltra
nsferase 1 like domain
family
No result
Nucleotidediphospho-sugar
transferases
superfamily
No result
No result
No result
Glycosyl
transferase
family 2
Cluster –
96009
(Glycosyl
transferase
)
No result
Cluster –
100590
Glyco_tranf EC 3.1.-._GTA_type :HydrolasesSuperfamily scting on
ester bond
Cluster
3685481
No result
Cluster
3685481
No result
(Hypothetic
al protein)
183
184
185
P44067
P71360
P44068
No result
No result
No result
No result
No result
WzyC family
Multidrug
resistance efflux
transporter EmrE
family
Acylmalonyl
condensing
enzymerelated
family
EamA-like
transporter
family
N-type ATP
pyrophosphatase
s family
No result
DUF208 family
Cluster –
155051
(O-Antigen
ligase)
Cluster144807
Wzy_C
Transmembr
Superfamily ane
(O-antigen
ligase)
EamA
Transmembr
Superfamily ane
(integral
membrane
protein )
Cluster –
15145
(Hypothetic
al protein )
DUF208
Zinc binding
Superfamily
Glycosyl
transferase
family 2
Glycosyl
transferase
family 2
Cluster
4170778
O-Antigen
ligaserealated
Cluster3853107
Protein of
unknown
function
DUF6,
transmembr
ane
Cluster
4025260
Protein of
unknown
function
186
187
188
189
190
P44069
P44070
P44931
P44072
P44073
No result
No result
No result
No result
dCMP
deaminase like domain
family
Deoxycytidylate
deaminase-like
family
No result
No result
No result
No result
No result
DoxX family
Transmembr
ane protein
YFCA
family
TauE family
Cytosine
deaminase
family
dCMP cyt deam
1 family
No result
No result
Cluster149076
(Integral
membrane
protein)
Cluster –
150623
DoxX
Transmembr
Superfamily ane
No result
Transmembr
ane
(Transporte
r)
DUF721 family
Cluster –
143335
(tRNA
specific
adenosine
deaminase
)
Cluster –
132995
(RNA
replicase
(fragment
))
DUF2547 family Cluster –
132575
(WBS15
splice
cytidine_de All lipid
aminasebinding
like
protein
Superfamily
DUF208
Cluster
3059231
DoxX
Cluster
4117461
Protein of
unknown
function
DUF81
Cluster
4151600
CMP/dCM
P
deaminase ,
zinc
binding
DUF721
Metal
Superfamily binding
Cluster
3748936
Protein of
unknown
function
DUF721
DUF2547
All lipid
Superfamily binding
proteins
Cluster
4354641
Pasteurellal
es
191
P44074
tRNA
(mo5U34)methyltransf
erase -like
domain
family
GTPaseactivating
protein -like
domain
1/2/3/4/5/6/
7/8/9/10/11/
12/13
family
S-adenosyl-Lmethioninedependent
methyltransferas
es superfamily
Methyltransf
erase family
Methytransf 11
family
PDZ domainlike superfamily
Serine
protease
family s1c
htra-related
family
Peptidase M50
family
variant 3)
Cluster –
143210
AdoMet_M Zinc binding
Tases
Superfamily
(Mthyltrans
ferase)
192
P44936
193
P44938
Undecapren Undecaprenyl
yl
diphosphate
pyrophosph synthase family
ate synthase
-like domain
family
Dehydrodoli
chyl
diphosphate
synthase
family
Prenyltransf
family
194
P44075
No result
Restriction
endonucleaselike superfamily
No result
Domain of
unknown
function
DUF559 family
195
P44076
No result
Thioltransferase
family
No result
Glutaredoxin
family
Cluster –
147367
S2P-M50
Transmembr
Superfamily ane /Zinc
/PDZ
binding
Superfamily
Cluster
3959076
Methytrans
ferase type
11
Cluster
4147222
Peptidase
(Zinc
M50 ,
metalloprot
putativeass
ease )
ociated
zinc
metallopept
idase
Cluster –
CIS_IPPS
EC 2.5.-.-:
Cluster
136904
Superfamily Transferases 4159268
Di(Undecapre
Transferring trans,polynyl
Alkyl or
cispyrophosph
Aryl Groups, decaprenyl
ate
Other than
cistransfera
synthase )
Methyl
se
Groups
Cluster –
Restriction_ DNA
Cluster
144166
endonucleas replication
4054936
e_like
Domain of
(DNA
Superfamily
unknown
methylase)
function
DUF559
Cluster –
COG4545
Outer
Cluster407
142128
Superfamily membrane
1603
(Glutaredo
xin)
196
197
198
199
P44940
P44077
P44078
P44941
No result
No result
No result
Phytoene
dehydrogen
ase -like
domain
family/
Glutathionylsper
midine synthase
ATP-binding
domain-like
family
No result
Bifunctional
glutathionyls
permidine
synthetase/a
midaserelated
family
No result
Iron-dependent
repressor
protein,
dimerization
domain family
No result
FAD/NAD(P)binding domain
superfamily
Electron
transfer
flavoproteinubiquinone
oxidoreducta
GSP_synth
family
Cluster –
144944
GSP_synth Iron-binding
Superfamily
(Glutathion
ylspermidin
e synthase)
No result
Cluster –
135599
(Lipoprotei
n)
DUF2251 family Cluster –
151329
No result
Zinc-binding
DUF2251
All lipidSuperfamily binding
proteins
(Replicatio
n protein)
HI0933_like
family
Cluster –
148689
(flavoprotei
n)
NAD_bindi All lipidng_8
binding
Superfamily proteins
Uncharacte
rised
conserved
protein
UCP03729
1,
glutaredoxi
n-related
Cluster394
3042
Glutathiony
lspermidine
synthase
Cluster408
1953
Gammaprot
eobacteria
Cluster431
8060
Uncharacte
rised
conserved
protein
UPC00705
0
Cluster
4145478
HI0933like protein
200
201
P44079
P44080
Pyridine
nucleotidedisulfide
oxidoreduct
ase -like
domain
family
No result
No result
se family
Pili subunits
superfamily
No result
No result
No result
N_methyl_2
family
No result
Cluster –
154385
(alpha-1,3mannosyltr
ansferase
mnn1)
Cluster –
120178
No result
Transmembr
ane
No result
Transmembr
ane
(Hypothetic
al protein )
202
203
204
P44081
P44082
Q57120
No result
No result
No result
No result
No result
Kis/PemI
No result
No result
No result
10 TM Acyl
Transferase
domain found in
Cas1p
(Cas1_AcylT
family )
Type II secretory
pathway
pseudopilin
(PulG family)
Antitoxin-MazE
Cluster –
137834
DUF2572
Transmembr
Superfamily ane
(Serine
protease)
Cluster –
120180
No result
(Hypothetic
al protein)
Cluster –
VagC
Cluster405
7757
Prepilintype
cleavage/m
ethylation,
N-terminal
Cluster414
0983
Prepilin
peptidasedependent
protein B,
predicted
Cluster366
9568
Pasteurella
ceae
Transmembr
ane
Cluster408
5812
Pasteurellal
es
Iron-binding
Cluster406
addiction
antidote family
205
P44954
uncharacteri
sed family
128 -like
domain
YehU-like
family
No result
Mei5 family
206
P44084
No result
No result
No result
LPAM_1 family
207
P44085
No result
No result
No result
No result
208
P44086
No result
No result
No result
No result
209
Q57133
No result
GNA1870
immunodominan
t domain-like
family
No result
Lipoprotein_5
family
210
P46455
No result
No result
No result
Tic20-like
155736
Superfamily
(Virulenceassociated
protein B)
Cluster –
133503
4538
Proteobacte
ria
UPF0270
Zinc-binding
Superfamily
Cluster410
7858
Hypothetic
al upf0270
protein
pa3463
Cluster384
9717
Pasteurellal
es
(yheU like
)
Cluster –
151115
DUF1425
EC 3.8.-.-:
Superfamily Hydrolases Acting on
(lipoprotein
Halide
)
Bonds
Cluster –
No result
All lipid120184
binding
proteins
(Hypothetic
al protein )
Cluster –
No result
No result
19225
(Hypothetic
al protein)
Cluster –
Lipoprotein
148872
_5
Superfamily
(Transferri
n binding
protein 2)
Cluster –
DUF997
Cluster416
0927
Complete
proteome
No result
All lipidbinding
proteins
Cluster
4628469
Transferrin
receptor
activity
Transmembr
Cluster397
protein family
211
212
213
214
Q57147
O86230
P44965
P43907
No result
No result
Tryptophan
synthase like domain
family/
Multidrug
Family not
resistance efflux named
transporter EmrE
family
EamA-like
transporter
family
Multidrug
Family not
resistance efflux named
transporter EmrE
family
EamA-like
transporter
family
FMN-linked
oxidoreductases
family
TRNAdihydrouridi
ne synthase
family
Dihydrouridine
synthase (Dus
family )
No result
LPAM_1 family
tRNAdihydrouridi
ne synthase
-like domain
No result
No result
156381
Superfamily ane
(Integral
membrane
protein)
Cluster –
143722
EamA
Transmembr
Superfamily ane
(Tou6 like )
Cluster –
143722
EamA
Transmembr
Superfamily ane
(Tou6 like )
Cluster –
147656
(TIMbarrel
protein)
Cluster –
133395
TIM_phosp Zinc-binding
hate_bindin
g
Superfamily
No result
EC 3.1.-.-:
Hydrolases Acting on
4290
Protein of
unknown
function
DUF997
Cluster369
2408
Protein of
unknown
function
DUF6,
transmembr
ane
Cluster
3692408
Protein of
unknown
function
DUF6,
transmembr
ane
Cluster415
4178
TRNAdihydrourid
ine
synthase
Cluster388
9417
Pasteurellal
215
216
P43908
P44972
No result
No result
No result
No result
Peroxide
stress
response
protein
YAAA
family
Toxin_65 family
No result
Haemolytic
family
(signal
peptide
protein )
Cluster –
151722
(Protein
yaaA)
Cluster –
151228
Ester Bonds
DUF328
EC 2.5.-.-:
Superfamily Transferases
Transferring
Alkyl or
Aryl Groups,
Other than
Methyl
Groups
Haemolytic MetalSuperfamily binding
(Hypothetic
al protein )
217
218
P44974
Q57134
Phosphogly Arylsulfatase
cerol
family
transferase I
-like domain (Alkaline
phosphatase-like
superfamily)
ranscription RuvA domain 2elongation
like superfamily
factor,
mitochondri
al -like
domain 1/2
family
Inner
membrane
protein
family
Sulfatase family
Family not
named
HHH_3 family
Cluster –
151987
(Integral
membrane
protein)
Cluster –
144900
(ComE
operon
protein 1)
Sulfatase
Transmembr
Superfamily ane
No result
No result
es
Cluster412
0731
Protein of
unknown
function
DUF328
Cluster411
4102
Protein of
unknown
function
DUF37
Cluster420
0264
Sulfatase
Cluster416
1060
Competenc
e protein
ComEA,
helixhairpinhelix
region
219
220
221
222
223
P44093
Q57151
P44094
P44095
P44992
No result
YgbK-like
family
D-tagatose1,6bisphosphate
aldolase
family
DUF1537 family Cluster –
149258
(ygbK like
)
Hydroxypyr
uvate
isomerase like domain
family
Xylose
isomerase-like
superfamily
CDPabequose
synthase like domain
family/
Tyrosinedependent
oxidoreductases
family
NAD
dependent
epimerase/de
hydratase
family
Epimerase
family
Putative cyclase
family
No result
Cyclase family
NAD
dependent
epimerase/d
ehydratase
family
protein -like
domain
Kynurenine
formamidas
e -like
domain
family
No result
Hydroxypyru AP_endonuc_2
vate
family
isomerase
family
Cluster –
148356
(Hydroxyp
yruvate
isomerase)
Cluster –
142884
(Nucleosid
ediphosphat
e-sugar
epimerase)
Cluster –
153826
DUF1537
EC 4.1.-.-:
Superfamily Lyases CarbonCarbon
Lyases
AP2Ec
EC 2.4.-.-:
Superfamily Transferases
Glycosyltran
sferases
Cluster416
0211
Protein of
unknown
function,
DUF1537
Cluster415
1021
Hydroxypy
ruvate
isomerase
NADB_Ros EC 1.1.-.-:
smann
Oxidoreduct
Superfamily ases - Acting
on the CHOH group of
donors
Cluster410
7863
NADdependent
epimerase/
dehydratase
Cyclase
Transmembr
Superfamily ane
Cluster410
2526
Putative
cyclase
SBP_bac_7 EC 2.4.-.-:
Superfamily Transferases
-
Cluster418
0508
Extracellul
(Cyclase)
Phosphate
binding proteinlike family
No result
SBP_bac_7
family
Cluster –
147377
224
225
226
227
P44993
P44994
P44097
P44098
No result
No result
No result
Asparagine
synthetase
No result
No result
No result
Class II
glutamine
Family not
named
Family not
named
No result
Putative
glutamine
DctM family
DctQ family
YGGT family
GATase_4
family
(TRAPtype C4dicarboxyla
te transport
system,
periplasmic
component)
Cluster –
DctQ
147373
Superfamily
Glycosyltran
sferases
ar solutebinding
protein,
family 7,
bacteria
Transmembr
ane
Cluster410
1809
TRAP
dicarboxyla
te
transporter,
DctM
subunit
(TRAP
dicarboxyla
te
transporter,
DctM
subunit)
Cluster –
DctQ
Transmembr
147376
Superfamily ane
(Permease
component
of C4
dicarboxyla
te
transporter)
Cluster –
YGGT
154128
superfamily
(YGGT
family
protein )
Cluster –
148742
Transmembr
ane
Gn_AT_II
All lipidSuperfamily binding
Cluster
4101809
TRAP
dicarboxyla
te
transporter,
DctM
subunit
Cluster413
3866
Protein of
unknown
function
YGGT
Cluster397
9557
[glutaminehydrolyzing
] -like
domain ½
family
228
229
230
231
P44099
P44103
Q57498
P44104
amidotransferase
s family
(N-terminal
nucleophile
aminohydrolases
(Ntn hydrolases)
superfamily)
Origin
P-loop
recognition containing
complex
nucleoside
protein 5 triphosphate
like domain hydrolases
family
superfamily
Transglutam Transglutaminas
inase family e core family
protein -like
domain
family
Carboxymu
conolactone
decarboxyla
se family
protein -like
domainfami
ly
AhpD-like
superfamily
No result
No result
amidotransfe
rase yafj
family
No result
proteins
(glutamine
amidotransf
erase )
AAA_14 family
Cluster –
151461
(ATPase)
No result
No result
No result
Transglut_core
family
CMD family
No result
Cluster –
148463
(Transgluta
minase-like
enzymes)
Cluster –
147110
(Carboxym
uconolacto
ne
decarboxyl
ase)
Cluster –
128052
(Type III
restriction-
Amidophos
phoribosyl
transferase
AAA_14
EC 2.4.-.-:
Superfamily Transferases
Glycosyltran
sferases
Cluster415
4065
Nucleotide
binding
Transglut_c All lipidore
binding
Superfamily proteins
Cluster351
3118
Transgluta
minase-like
CMD
All lipidSuperfamily binding
proteins
Cluster413
4856
Alkylhydro
peroxidase
AhpD core
No result
Cluster375
5017
Gammaprot
eobacteria
Zinc-binding
232
233
P44106
P44107
No result
No result
Tail-associated
lysozyme gp5,
C-terminal
domain family
No result
No result
No result
TypeIII_RM_me
thfamily
No result
modificatio
n system:
methylase)
Cluster –
102844
TypeIII_R
All lipidM_meth
binding
Superfamily proteins
(Hemolysin
)
Cluster –
No result
19264
All DNAbinding
(Hypothetic
al protein )
234
235
236
P71367
P45019
P44110
Phosphogly Arylsulfatase
cerol
family
transferase I
-like domain
family
No result
No result
Inner
membrane
protein
family
Sulfatase family
Terpenoid
Uncharacteri
cyclases/Protein zed family
prenyltransferase
s superfamily
DUF423 family
No result
DUF441 family
No result
Cluster –
151987
Sulfatase
Transmembr
Superfamily ane
(Membrane
-associated
metaldependent
hydrolase)
Cluster –
143810
DUF423
Transmembr
Superfamily ane
(Small
membrane
protein)
Cluster –
156337
DUF441
superfamily
(inner
membrane
Transmembr
ane
Cluster402
4927
DNA
methylase
N-4/N-6
Cluster403
9085
Sulfuric
ester
hydrolase
activity
Cluster405
7510
Sulfatase
Cluster465
3268
Protein of
unknown
function
DUF423
Cluster406
6607
Protein of
unknown
function
protein)
237
238
239
P45026
P44111
P44112
240
P45071
241
P45074
BolA
protein -like
domain
family
BolA-like family BOLA-like
proteinrelated
family
No result
No result
No result
UPF0042
nucleotidebinding
protein
CMS1991 like domain
family
LPSassembly
protein lptD
-like domain
family
No result
No result
No result
BolA family
Cluster –
144957
BolA
All DNASuperfamily binding
(Transcripti
onal
regulator
(BolA
family))
DUF3884 family Cluster –
No result
19279
LPAM_1 family
P-loop
containing
nucleoside
triphosphate
hydrolases
superfamily
Uncharacteri
zed family
ATP_bind_2
family
No result
No result
OstA family
No result
(Hypothetic
al protein )
Cluster –
LPAM_1
Hormone
120189
Superfamily
(Hypothetic
al protein )
Cluster –
ATP_bind_ Metal156331
2
binding
Superfamily
(P-loopcontaining
kinase)
Cluster –
156101
(ABC
superfamily
OstA
All lipidSuperfamily binding
proteins
DUF441,
transmembr
ame
Cluster414
3345
BolA-like
Cluster378
0104
Haemophil
us
influenzae
Cluster409
2229
Pasteurellal
es
Cluster412
1952
ATPase, Ploopcontaining
Cluster404
9509
Cell
envelope
biogenesis
242
P45075
No result
No result
No result
LptC family
(bind_prot)
transport
protein)
Cluster –
156487
YhbN
COG3117
Transmembr
Superfamily ane
(YrbK
protein)
243
244
245
246
P45076
P45077
P45083
P44116
UPF0307
PSPTO4464-like
protein yjgA family
-like domain
1 family
No result
No result
Uncharacteri
zed protein
TLDD AND
PMBA
family
1,4dihydroxy2naphthoylCoA
hydrolase like domain
family
No result
Putative
modulator of
DNA gyrase,
PmbA/TldD
family
DUF615 family
Cluster –
148809
DUF615
superfamily
All DNAbinding
No result
All lipidbinding
proteins
(yjgA
protein)
PmbA_TldD
family
(PmbA
protein)
Thioesterase/thio Family not
l ester
named
dehydraseisomerase
superfamily
4HBT family
Restriction
endonuclease-
DUF559 family
No result
Cluster –
155408
Cluster –
147916
hot_dog
All lipidSuperfamily binding
proteins
(Thioestera
se)
Cluster –
144166
Restriction_
endonucleas
Zinc-binding
Cluster419
3210
Protein of
unknown
function
DUF1239
Cluster415
6047
Uncharacte
rised
protein
family
UPF0307
Cluster416
2426
Peptidase
U62,
modulator
of DNA
gyrase
Cluster417
7136
Phenylaceti
c acid
degradation
-related
protein
Cluster
4054936
like superfamily
(DNA
methylase)
247
248
249
250
Q57252
P45085
P44117
P44119
UDP-Nacetylenolp
yruvoylgluc
osamine
reductase like domain
family/
FAD-linked
D-lactate
oxidases, Cdehydrogena
terminal domain se family
/ FADbinding/transport
er-associated
domain-like/
alpha-helical
ferredoxin
superfamily
NADHquinone
oxidoreduct
ase subunit I
-like domain
family
AT4G10000 Thioltransferase
protein -like family
domain ½
family
FAD_binding_4
family
Glutaredoxin
family
DUF496 family
Triger
factor/SurA
peptide-binding
domain-like
superfamily
No result
No result
No result
No result
FAD_bindi Zinc-binding
ng_4
Superfamily
(Oxidoredu
ctase)
Glutaredoxin
-related
protein
family
AT4G10000
protein -like
domain ½
family
Cluster –
140820
e_like
Superfamily
Cluster –
141965
(Glutaredo
xin-related
protein)
Cluster –
152251
Thioredoxin EC 2.4.-.-:
_like
Transferases
Superfamily Glycosyltran
sferases
Cluster411
2638
Glutaredoxi
n-related
protein
DUF496
superfamily
Cluster359
1848
Protein of
unknown
function
DUF496
(Putative
alpha helix
protein)
SprT-like family
Cluster –
Protein of
unknown
function
DUF559
Cluster410
4308
FADlinked
oxidase, Cterminal
SprT
TC 2.C.
Electrochemi
cal Potentialdriven
transporters Ion-gradientdriven
energizers
Zinc-binding
Cluster407
133019
Superfamily
(Protein
sprT)
251
P45097
Predicted
organic
radical
activating
enzyme like domain
family
7-cyano-7deazaguanin
e synthase like domain
family
Radical SAM
enzymes
superfamily
Family not
named
Fer4_14 family
(Radical SAM
proteins)
N-type ATP
pyrophosphatase
s family
No result
QueC family
No result
No result
No result
Cluster –
148455
Radical_SA Iron-binding
M
Superfamily
(Radical
activating
enzyme)
252
P44124
253
P44125
No result
254
P45103
255
P45104
tRNA
YrdC-like family SUA5 family
threonylcarb
amoyladeno
sine
biosynthesis
-like domain
family
30S
Pseudouridine
RIbosomal
ribosomal
synthase
large subunit
Sua5_yciO_yrd
C family
S4 family
Cluster –
147255
AANH_like EC 2.7.-.-:
Superfamily Transferases
(PP-loop
Transferring
superfamily
PhosphorusATPase)
Containing
Groups
Cluster –
No result
No result
19329
(Hypothetic
al protein )
Cluster –
Sua5_yciO_ Metal145750
yrdC
binding
Superfamily
(SUA5/yci
O/yrdC
family
protein)
Cluster –
PseudoU_sy RNA141200
nth
binding
5447
Protein of
unknown
function
DUF335,
SprT
Cluster414
5506
Radical
SAM
Cluster384
3800
Exoenzyme
S synthesis
protein
B/queuosin
e synthesis
Cluster398
4753
Pasteurellal
es
Cluster391
3974
Sua5/YciO/
YrdC/Ywl
C
Cluster415
2309
256
257
P44126
P44127
protein S4 like domain
family
RsuA/RluD
family
pseudouridin
e synthase b
family
No result
SMR domainlike superfamily
No result
No result
No result
No result
Superfamily Proteins
Smr family
DUF412 family
(Ribosomal
large
subunit
pseudouridi
ne synthase
B)
Cluster –
Smr
Nuclear
147429
Superfamily Receptors
(Smr
domain
protein)
Cluster –
156191
DUF412
Transmembr
Superfamily ane
(yfbV
protein)
258
259
P71373
P44129
Putative
uncharacteri
zed protein like domain
family
Tyrosinedependent
oxidoreductases
family
Sugar
nucleotide
epimerase
related
family
Epimerase
family
No result
No result
No result
TctB family
Cluster –
146743
(Celldivision
inhibitor)
Cluster –
156295
(yciS
protein)
NADB_Ros EC 2.7.-.-:
smann
Transferases
Superfamily Transferring
PhosphorusContaining
Groups
DUF1049
Transmembr
Superfamily ane
Pseudouridi
ne
synthase,
RsuA and
RluB/E/F
Cluster381
3237
Smr
protein/Mut
S2 Cterminal
Cluster393
5154
Uncharacte
rised
protein
family
UPF0208
Cluster394
7300
NAD(P)binding
Rossmannlike
Domain
Cluster407
7230
Protein of
unknown
function
DUF1049
260
P44131
No result
No result
No result
DUF945 family
Cluster –
152146
(GTPbinding
protein)
261
262
263
264
P44132
P45122
P44133
P44134
No result
No result
No result
No result
No result
No result
No result
CAC2185-like
family
No result
Connexin43
family
Inner
membrane
protein
family
UPF0126 family
No result
No result
No result
Cluster –
152146
(Putative
GTPbinding
protein)
Cluster –
133357
COG5339
EC 5.3.-.-:
Superfamily Isomerases Intramolecul
ar
Oxidoreduct
ases
COG5339
EC 2.7.-.-:
Superfamily Transferases
Transferring
PhosphorusContaining
Groups
UPF0126
Transmembr
superfamily ane
(Transmem
brane
protein)
PrpR_N family
Cluster –
148284
No result
Transmembr
ane
(Sterol Oacyltransfer
ase 1)
Cluster –
DUF1919
Metal129426
Superfamily binding
(Capsular
polysacchar
ide
Cluster398
6091
Protein of
unknown
function
DUF945,
bacterial
Cluster398
6091
Protein of
unknown
function
DUF945,
bacterial
Cluster413
7444
Uncharacte
rised
protein
family
UPF0126
Cluster415
4441
Gammaprot
eobacteria
Cluster411
8479
Protein of
unknown
function
DUF1919
265
266
P44135
P44136
Phosphogly Arylsulfatase
cerol
family
transferase I
-like domain
family
Arylsulfatase
family
No result
No result
No result
Sulfatase family
biosynthesi
s protein)
Cluster –
151985
Sulfatase
Transmembr
Superfamily ane
(sulphatase
)
NicO family
Cluster –
127674
NicO
NickelSuperfamily binding
(ShiF
protein)
267
P44137
No result
No result
No result
DUF1007 family Cluster –
156273
DUF1007
Zinc-binding
Superfamily
(exported
protein)
268
P44138
No result
RelE-like
superfamily
No result
Plasmid_killer
family
Cluster –
156274
Plasmid_kil Zinc-binding
ler
Superfamily
(Killer
protein)
269
P44139
No result
No result
No result
SirB family
Cluster –
155547
(Protein
sirB2)
SirB
Transmembr
Superfamily ane
Cluster413
3052
Membrane
sulfatase,
HI1246related
Cluster404
1182
Nickel/cob
alt
transporter,
highaffinity
Cluster383
5140
Protein of
unknown
function
DUF1007
Cluster405
6984
Plasmid
maintenanc
e system
killer
Cluster425
2806
Invasion
gene
expression
up-
270
271
272
273
274
P44140
Same as
270
Same as
270
P44144
P44145
tRNA(Met)
cytidine
acetyltransf
erase TmcA
-like domain
family/
Mycothiol
acetyltransf
erase -like
domain
1/2/3 family
-
Acyl-CoA Nacyltransferases
(Nat)
superfamily/
NGNAT_acetyltr_
acetyltransfer 2 family
ase 10 family
Cluster –
113588
(Acetyltran
sferase)
P-loop
containing
nucleoside
triphosphate
hydrolases
superfamily
Helicase_R All DNAecD
binding
Superfamily
/tRNA_bind
_2
Superfamily
regulator,
SirB
Cluster415
9674
Protein of
unknown
function
DUF699,
ATPase
putative
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
No result
No result
No result
YcaO-like
family
Cluster –
156283
YcaO
No result
Superfamily
No result
Glucos_trans_II
family
(YcaO
protein)
Cluster –
85251
No result
Cluster410
2994
Integral to
membrane
No result
Sigma3 and
sigma4 domains
of RNA
polymerase
sigma factors
superfamily
No result
(4hydroxyben
zoate
octaprenylt
ranferase
related
protein)
Transmembr
ane
275
276
277
278
279
No result
P44148
P44150
P45138
P44154
No result
AT4G25080
protein -like
domain ½
family
Ribosome
maturation
factor rimP
-like domain
family
No result
No result
S-adenosyl-Lmethioninedependent
methyltransferas
es superfamily
YhbC-like, Nterminal domain
family
No result
No result
Methyltransf
erase family
No result
No result
No result
Methyltransf_18
family
DUF150 family
Zn_Tnp_IS1595
Cluster –
141467
(Iron ABC
transporter,
solutebinding
protein)
Cluster –
146961
No result
No result
AdoMet_M All DNATases
binding
Superfamily
(Methyltran
sferase)
Cluster –
Sm_like
Iron-binding
149464
Superfamily
(YhbC
protein )
(protein
associated
with RNA)
Cluster –
156282
DUF2310
Zinc-binding
Superfamily
(Zn-ribboncontaining
protein)
280
P44156
Cysteine
desulfuratio
n protein
sufE -like
SufE/NifU
superfamily
BOLA-like
proteinrelated
family
SufE family
Cluster –
142307
(SufE
SufE
Nuclear
Superfamily Receptors
No result
Cluster408
0031
Methyltran
sferase type
11
Cluster418
9503
Uncharacte
rised
protein
family
UPF0090
Cluster377
1672
Uncharacte
rised
conserved
protein
UCP02903
7
Cluster360
5417
Fe-S
metabolism
281
282
283
P45145
P45146
Q57320
domain
family
No result
No result
No result
protein)
No result
Indoleamine 2,3dioxygenase-like
family
ABC transporter
transmembrane
region family
No result
LrgA family
Putative
serotonin
transporter
family
LrgB-like family
No result
LysE family
Cluster –
151186
LrgA
Transmembr
Superfamily ane
(Murein
hydrolase
exporter)
Cluster –
151187
LrgB
Transmembr
Superfamily ane
(Negative
regulator of
murein
hydrolase)
Cluster –
152577
Cluster413
9093
LrgB-like
protein
LysE
Transmembr
Superfamily ane
Cluster418
4271
Lysine
exporter
protein
(LYSE/YG
GA)
Cluster408
7288
2Fe-2S
ferredoxinlike
(Threonine
efflux
protein)
284
285
P45154
P44158
NADHquinone
oxidoreduct
ase -like
domain
family
No result
2Fe-2S
ferredoxin-like
family
Family not
named
Fer2 family
Cluster –
145548
fer2
Iron-binding
Superfamily
(Ferredoxin
)
No result
No result
Pox_A8 family
associated
SufE
Cluster
4142464
LrgA
Cluster –
119769
(endospore
developme
No result
Transmembr
ane
Cluster325
9605
Proteobacte
ria
286
287
288
P71375
P44160
P44161
No result
Aldose 1epimerase
family
protein -like
domain
family
No result
No result
Galactose
mutarotase-like
superfamily
No result
Sodium/solut
e symporter
family
nt protein)
Sodium:solute
Cluster –
symporter family 141147
Aposporyassociated
protein crelated
family
Aldose_epim
family
No result
MatP family
(Na+/gluco
se
cotransport
er)
Cluster –
112182
SLC5-6Transmembr
like_sbd
ane
Superfamily
Cluster427
9952
Sodium/sol
ute
symporter
Aldose_epi No result
m
Superfamily
Cluster415
8146
Aldose 1epimerase
MatP
Zinc-binding
Superfamily
Cluster361
8064
Protein of
unknown
function
DUF1047
Cluster418
6044
Protein
kinase-like
(kinase like
protein)
Cluster –
135338
(Dehydroge
nase)
289
290
291
P44162
P44163
P71376
No result
No result
CRS2-
Protein kinaselike (PK-like)
superfamily
No result
YhbY-like
No result
No result
No result
RIO1 family
LPAM_1 family
CRS1_YhbY
Cluster –
147713
(Aminogly
coside
phosphotra
nsferase)
Cluster –
19499
PKc_like
All lipidSuperfamily binding
proteins
No result
(Hypothetic
al protein)
Cluster –
CRS1_Yhb
No result
rRNA-
Cluster662
407
Haemophil
us
influenzae
Cluster415
292
293
294
P44164
P71378
P44165
associated
factor 1,
chloroplasti
c -like
domain ½
family
Serine/threo
nine-protein
phosphatase
Pgam5, like domain
family
family
No result
Apolipoprotein
A-I superfamily
149377
Y
binding
Superfamily Proteins
(RNAbinding
protein)
Phosphoglycerat
e mutase-like
superfamily
NADPHOuter membrane
dependent
efflux proteins
7-cyano-7(OEP) family
deazaguanin
e reductase like domain
½ family/
Outer
membrane
protein oprJ
-like domain
family
His_Phos_1
family
Cluster –
147721
Late
embryogenes
is abundant
(plants) learelated
family
Lipase_bact_N
family
(Phosphohi
stidine
phosphatas
e sixA)
Cluster –
141357
Outer
membrane
cation efflux
protein
family
QueF_N family
No result
(Late
embryogen
esis
abundant
protein 1)
Cluster –
147254
(Outer
membrane
efflux
protein)
HP
EC 3.1.-.-:
Superfamily Hydrolases Acting on
Ester Bonds
No result
Outer
membrane
TFold
Outer
Superfamily membrane
9250
RNAbinding,
CRM
domain,
prokaryote
Cluster415
8723
Phosphohis
tidine
phosphatas
e activity
Cluster
Cluster352
1305
Outer
membrane
efflux
protein
295
296
297
298
299
P71379
P45173
P44167
P44168
P45180
family
Cysteine
Cystathionine
desulfurase synthase-like
-like domain family
family
Glycogen
synthase like domain
½ family
Aminotran_5
family
Cluster –
139955
Bacterioferrit Ferritin family
in family
(Cysteine
desulfurase
)
Cluster –
147577
S-adenosyl-Lmethioninedependent
methyltransferas
es superfamily
Methyltransf
erase family
(bacteriofer
ritin)
Cluster –
143210
No result
No result
Ferritin -like Ferritin-like
domain
superfamily
family
tRNA
(mo5U34)methyltransf
erase -like
domain
family
No result
Cysteine
desulfurylase
family
Oligosaccharide
phosphorylase
family
Methyltransf_9
family
AAT_I
EC 4.1.-.-:
Superfamily Lyases CarbonCarbon
Lyases
Cluster412
0088
Cysteine
desulfurase
Ferritin_like All lipidSuperfamily binding
proteins
Cluster417
4904
DNAbinding
protein Dps
Cluster390
4934
TRNA
(mo5U34)methyltrans
ferase
Cluster433
2397
Uncharacte
rised
conserved
protein
UCP00617
3
Cluster397
6983
Glycogen/s
tarch/alphaglucan
phosphoryl
ase
AdoMet_M Zinc-binding
Tases
Superfamily
(Methyltran
sferase)
Glycogen
phosphorylas
e family
CxxCxxCCfamil
y
Cluster –
156293
(Putative zincor iron-chelating
domain)
(ycgN
protein)
Phosphorylasefa
mily
Cluster –
147282
(Glycogen
phosphoryl
ase 1)
FliB
All lipidSuperfamily binding
(Flagellin
proteins
Nmethylase)
Glycosyltra
nsferase_G
TB_type
Superfamily
EC 2.4.-.-:
Transferases
Glycosyltran
sferases
300
301
302
303
304
P45182
P44169
P44170
P44171
O86237
Vitamin
B12
transporter
BtuB -like
domain
family
No result
No result
No result
Macrophage
migration
inhibitory
factor -like
domain
family
Ligand-gated
protein channel
family
(Porins
superfamily)
No result
Frataxin-like
family
No result
Tautomerase/MI
F superfamily
Cluster –
149214
OM_channe
ls
Superfamily
No result
(Oar
protein)
Multidrug
No result
resistance efflux
transporter EmrE
family
No result
Plug family
No result
No result
HSDR_N_2fami
ly
(Type I
restriction
enzyme R
protein N
terminus)
EamA-like
transporter
family
Cluster –
137251
(Adenylate
cyclase)
Cluster –
143726
HSDR_N
EC 3.1.-.-:
Superfamily Hydrolases Acting on
Ester Bonds
No result
Transmembr
ane
Cluster400
8610
Protein of
unknown
function
DUF6,
transmembr
ane
No result
All lipidbinding
proteins
Cluster332
978
Haemophil
us
influenzae
Cluster401
6578
Macrophag
e Migration
Inhibitory
Factor
Transcription
factor DP family
(Permease
of the
drug/metab
olite
transporter
(DMT)
Cluster –
19520
Tautomerase_2
family
(Hypothetic
al protein )
Cluster –
No result
156324
(4oxalocroton
ate
Cluster425
8564
TonBdependent
receptor,
plug
Cluster410
6033
Complete
proteome
EC 3.1.-.-:
Hydrolases Acting on
Ester Bonds
305
306
P44172
P44173
Activating
signal
cointegrator
1 -like
domain
family
yqfB-like famiy
No result
ABC transporter
ATPase domainlike family
No result
ASCH family
tautomeras
e)
Cluster –
151905
(Tex
protein)
No result
Zeta_toxin
family
Cluster –
145346
(kinase)
307
308
P44175
P44176
No result
No result
Error-prone PHP domain
DNA
family
polymerase
-like domain
family
No result
PHP domain
protein
family
No result
PHP domain
family
Cluster –
108913
ASCH
EC 3.6.-.-:
Superfamily Hydrolases Acting on
Acid
Anhydrides
COG4185
EC 3.5.-.-:
Superfamily Hydrolases Acting on
CarbonNitrogen
Bonds, other
than Peptide
Bonds
No result
Transmembr
ane
(Putative
peptidoglyc
an bound
protein)
Cluster –
PHP
Zinc-binding
147364
Superfamily
(polymerase
(Protein
and
trpH)
Histidinol
Phosphatase
domain)
Cluster377
5188
Uncharacte
rised
conserved
protein
UCP02914
3
Cluster394
0252
Bacteria
Cluster429
9950
Proteobacte
ria
Cluster413
2555
Polymerase
and
histidinol
phosphatas
e, Nterminal
309
P44177
No result
No result
No result
310
P44180
No result
No result
No result
311
P44181
No result
"Winged helix"
DNA-binding
domain
superfamily
No result
No result
No result
312
313
P44183
P45197
No result
No result
No result
No result
RelB antitoxin
family
Cluster –
133463
Structural
protein
(Matrix
(Hypothetic
protein,Core
al protein)
protein,Viral
occlusion
body,Keratin
)
Ezrin/radixin/mo Cluster –
DUF2213
EC 2.7.-.-:
esin family
133464
Superfamily Transferases
(Putative
Transferring
bacteriopha
Phosphorusge protein)
Containing
Groups
HTH_20family
Cluster –
114345
(Putative
ArsR-like
transcriptio
nal
regulato)
DUF1073 family Cluster –
128920
Phage_pRha
family
(Putative
bacteriopha
ge protein)
Cluster –
130171
No result
DUF2513
EC 4.2.-.-:
Superfamily Lyases CarbonOxygen
Lyases
phge_rel_H Outer
I1409
membrane
Superfamily
hage_pRha EC 2.7.-.-:
Superfamily Transferases
-
Cluster402
7900
Proteobacte
ria
Cluster400
8185
Uncharacte
rised
conserved
protein
UCP02921
5
Cluster415
0082
Bacteria
Cluster380
4492
Phagerelated
protein
HI1409
Cluster424
2382
Phage
(Prophage
protein )
314
315
316
317
P44185
P44186
P44187
P44188
No result
No result
No result
No result
Endochitina
se -like
domain
family
Lysozyme-like
superfamily
No result
No result
No result
No result
Chitinaserelated
family
No result
HAMP family
Glyco_hydro_19
family
Cluster –
112330
(Mannosyl
transferase)
Cluster –
95125
(Sec1
protein)
Cluster –
139238
No result
Transferring
PhosphorusContaining
Groups
All lipidbinding
proteins
DUF2570
Transmembr
Superfamily ane
lysozyme_li All lipidke
binding
Superfamily proteins
(prophage
chitinase)
No result
Phage_holin_3
family
318
P44189
No result
No result
No result
Bro-N family
319
P44190
No result
No result
No result
Gp49 family
Cluster –
152656
Phage_holin TC 1.E.
_3
Channels/Po
Superfamily res - Holins
(Holin
(Lysis
protein 13))
Cluster –
Bro-N
146013
Superfamily
/P22_AR_C
(Antirepres Superfamily
sor protein)
Cluster –
Gp49
152258
Superfamily
regulatory
protein,
Rha
Cluster394
8635
Pasteurella
ceae
Cluster370
0737
Haemophil
us
influenzae
Cluster395
4912
Glycoside
hydrolase,
family 19,
catalytic
Cluster396
9424
Holin,
phage
lambda
Transmembr
ane
Cluster408
1061
BRO, Nterminal
EC 3.1.-.-:
Hydrolases -
Cluster415
7329
(prophage
protein)
320
P44191
DNAbinding
protein -like
domain
family
lambda
repressor-like
DNA-binding
domains
superfamily
No result
HTH_3 family
321
P44193
No result
No result
No result
AntA family
322
P44194
No result
DHS-like
NAD/FADbinding domain
superfamily
No result
HTH_23 family
323
P44196
No result
No result
No result
Xol-1_N family
(ribosomal
protein S5
domain 2-like)
324
P45202
Prolyl-
YbaK/ProRS
Uncharacteri
tRNA_edit
Cluster –
152259
(DNAbinding
prophage
protein)
Cluster –
24522
Acting on
Ester Bonds
COG3636
All DNASuperfamily binding
AntA
Iron-binding
Superfamily
/
(Hypothetic P22_AR_C
alprotein)
Superfamily
Cluster –
No result
rRNA136774
binding
Proteins
(DNA
binding
protein)
Cluster –
No result
All lipid120248
binding
proteins
(Putative
periplasmic
binding
protein
CbiK
precursor)
Cluster –
YbaK_like
EC 3.4.-.-:
Addiction
module
killer
protein,
HI1419
Cluster410
8294
Addiction
module
antidote
protein,
HI1420
Cluster412
9441
AntA/AntB
antirepress
or
Cluster414
7257
Proteobacte
ria
Cluster412
3296
Proteobacte
ria
Cluster394
325
326
327
328
P56507
P44197
Q57152
P44198
tRNA
synthetase like domain
family
associated
domain family
zed family
family
No result
Multidrug efflux
transporter AcrB
pore domain;
PN1, PN2, PC1
and PC2
subdomains
family
Pseudouridine
synthase
RsuA/RluD
family
No result
Rsbr_N family
RNA
pseudouridyl
ate synthase
family
protein
PseudoU_synth_
2 family
YqcC-like
family
No result
DUF446 family
(tRNA
pseudouridine
synthase C)
Cluster –
111794
YcgL family
Cluster –
92219
No result
tRNA
pseudouridi
ne synthase
C -like
domain
family
No result
YcgL-like
146267
Superfamily Hydrolases Acting on
(Transcripti
peptide
onal
bonds
regulator
(Peptidases)
ybaK)
Cluster –
UPF0181
All DNA34950
Superfamily binding
(Major
capsid
protein)
No result
Cluster –
126634
PseudoU_sy No result
nth
Superfamily
(Pseudouri
dylate
synthase)
DUF446
No result
Superfamily
(yqcC
protein)
(Transcripti
onal
regulator)
YcgL
Outer
Superfamily membrane
7534
Conserved
hypothetica
l protein
CHP00011
Cluster463
8118
Uncharacte
rised
protein
family
UPF0181
Cluster402
6323
Pseudouridi
ne
synthase,
RsuA and
RluB/C/D/
E/F
Cluster405
8700
Protein of
unknown
function
DUF446
Cluster408
3593
YcgL
domain
329
P44201
No result
No result
No result
DUF340 family
Cluster –
147632
DUF340
Transmembr
Superfamily ane
No result
All lipidbinding
proteins
-
(Efflux
system
protein)
--
-
-
Cluster408
2786
Protein of
unknown
function
DUF340,
prokaryotic
membrane
Cluster406
3148
Cytochrom
ec
assembly
protein,
transmembr
ane region
Cluster415
1583
Uncharacte
rised
conserved
protein
UCP01233
5
Cluster352
1305
Outer
membrane
efflux
protein
-
-
-
-
-
-
(Permease
protein of
ABC
transporter)
330
331
P44202
P44203
No result
No result
No result
No result
Family not
named
No result
DsbD family
Cluster –
140799
(Cytochro
me c-type
biogenesis
protein
ccdA)
DUF2846 family Cluster –
133467
DsbD
Transmembr
Superfamily ane
DUF2846
Transmembr
Superfamily ane
(lipoprotein
)
332
333
334
P45217
Same as
293
Same as
Outer
Outer membrane
membrane
efflux proteins
protein oprJ (OEP) family
-like domain
family
Outer
membrane
cation efflux
protein
family
OEP family
-
-
-
-
-
-
Cluster –
147254
335
336
337
338
292
P44205
Q57380
P44208
P44209
Maltose/mal
todextrinbinding
protein -like
domain
family
Periplasmic
binding proteinlike II
superfamily
Molybdatebinding
periplasmic
protein
family
Sulfate
transport
system
permease
protein -like
domain
family
MetI-like family
Molybdenum BPD_transp_1
transport
family
system
permease
protein
MODB
family
Transposase Recombinase
-like domain DNA-binding
family
domain family
No result
Hypothetical
protein HI1480
family
No result
No result
SBP_bac_11
family
HTH_Tnp_Mu_
2 family
No result
Cluster –
148792
(Molybdate
ABC
transporter,
periplasmic
-binding
protein)
Cluster –
106173
SBP_bac_1 EC 3.1.-.-:
Superfamily Hydrolases Acting on
Ester Bonds
Cluster392
0215
Molybdenu
m ABC
transporter,
periplasmic
binding
protein
TM_PBP2
Transmembr
Superfamily ane
Cluster411
1433
Bindingproteindependent
transport
systems
inner
membrane
component
Cluster450
1988
Mu DNA
binding, I
gamma
subdomain
(ABC
transporter,
permease
protein)
Cluster –
147020
(Mu-like
prophage
FluMu
transposase
A)
Cluster –
64926
(DNA for
5S rRNA
HTH_Tnp_ RNAMu_2
binding
Superfamily Proteins
No result
All DNAbinding
Cluster651
846
1MW5
339
340
P44210
P44212
No result
No result
No result
MIT domain
family
No result
No result
No result
TPR_11 family
(Fragment)
)
Cluster –
136630
(Transmem
brane
receptor
Roundabou
t1)
Cluster –
19581
No result
Zinc-binding
Cluster459
0269
Proteobacte
ria
No result
No result
No result
Nickelbinding
Cluster400
2200
Bacterioph
age Mu
Gam like
Cluster437
2814
Pasteurellal
es
No result
Outer
membrane
Cluster468
7471
Bacteria
All lipidbinding
proteins
Cluster374
6515
Proteobacte
ria
(Mu like)
341
342
343
P44213
P44214
P44215
No result
No result
No result
No result
No result
Bacterial
exopeptidase
dimerisation
domain family
No result
No result
No result
FlaC_arch
family
(Flagella
accessory
protein C)
No result
No result
Cluster –
19581
(Mu like)
Cluster –
141573
(Membrane
associated
lipoprotein)
Cluster –
No result
136913
(Golgi
complexassociated
protein)
344
345
346
P44217
P44218
P44219
No result
No result
No result
No result
No result
NacetylmuramoylL-alanine
amidase-like
No result
No result
No result
HMG_box
family
No result
Cluster –
143933
No result
All lipidbinding
proteins
(ABC-type
oligopeptid
e transport
system,
periplasmic
component)
Cluster –
PGRP
Metal112438
Superfamily binding
(Nacetylmura
moyl-Lalanine
amidase)
DUF2644 family Cluster –
19593
DUF2644
superfamily
TC 1.E.
Channels/Po
res - Holins
(Hypothetic
al protein)
347
P44220
No result
No result
No result
SHR3_chaperon
e family
(ER membrane
protein SH3)
348
P44221
No result
Glucocorticoid
receptor-like
(DNA-binding
domain)
No result
zf-dskA_traR
family
Cluster –
19594
DUF2681
EC 3.6.-.-:
Superfamily Hydrolases Acting on
(Hypothetic
Acid
al protein)
Anhydrides
Cluster –
zfZinc-binding
151030
dskA_traR
Superfamily
(DnaK
Cluster383
3866
Gammaprot
eobacteria
Cluster528
019
Haemophil
us
influenzae
Cluster394
1109
Uncharacte
rised
protein
family
HI1495
Cluster390
3620
Haemophil
us
influenzae
Cluster436
5291
Zinc finger,
C4
superfamily
349
350
351
352
353
P44222
O86242
P44223
P44224
P44225
No result
No result
No result
No result
No result
No result
No result
"Winged helix"
DNA-binding
domain
superfamily
No result
No result
No result
No result
No result
No result
No result
deletion
suppressor
protein)
DUF2730 family Cluster –
126210
HTH_12 family
(Sensor
histidine
kinase)
Cluster –
133279
(DNAbinding
domain)
DUF3486 family Cluster –
133128
Terminase_6
family
DUF935 family
(Mu-like
prophage
FluMu
protein
gp27)
Cluster –
133130
(Mu-like
prophage
FluMu
protein
gp28)
Cluster –
155792
DksA/TraR
-type
DUF2730
All lipidSuperfamily binding
proteins
Cluster414
1003
Gammaprot
eobacteria
HTH_12
Zinc-binding
Superfamily
Cluster418
4246
Proteobacte
ria
No result
Cluster408
4663
Proteobacte
ria
RNAbinding
Proteins
COG4373
All lipidSuperfamily binding
(Mu-like
proteins
prophage
FluMu
protein
gp28)
DUF935
Zinc-binding
Superfamily
Cluster378
8315
Uncharacte
rised
conserved
protein
UCP00705
6
Cluster415
1326
354
P44226
No result
No result
No result
Phage_Mu_F
family
(Mu-like
prophage
FluMu
protein
gp29)
Cluster –
155625
Protein of
unknown
function
DUF935
Phage_Mu_ All lipidF
binding
Superfamily proteins
(Head
morphogen
esis
protein)
355
356
357
358
P44227
P44228
Same as
356
P44230
No result
No result
No result
No result
YqbF N-terminal No result
domain-like
family
Mu-like_gpT
family
HeH family
Cluster –
133198
Cluster411
8925
Phage
putative
head
morphogen
esis
protein,
SPP1 gp7
Cluster405
3807
Bacteria
(Major
head
subunit
(gpT))
Cluster –
155801
MuEC 2.7.-.-:
like_gpT
Transferases
Superfamily Transferring
PhosphorusContaining
Groups
LEM_like
Outer
Superfamily membrane
(Mu-like
prophage
FluMu
protein
gp35)
-
-
-
-
DUF1320
EC 2.4.-.-:
Cluster414
-
-
-
-
No result
No result
No result
DUF1320 family Cluster –
Cluster394
7763
2OUT
155802
359
360
361
362
P44231
P44232
P44234
P44235
No result
No result
No result
No result
No result
No result
No result
No result
No result
No result
No result
No result
Superfamily Transferases
Glycosyltran
sferases
1019
Protein of
unknown
function
DUF1320
DUF1834
Zinc-binding
Superfamily
(Mu-like
prophage
FluMu
protein
gp37)
Cluster –
133134
Cluster372
1770
Protein of
unknown
function
DUF1834
DUF2635
Outer
Superfamily membrane
(Mu-like
prophage
FluMu
protein
gp38)
Cluster –
155921
Cluster412
7856
Proteobacte
ria
Tail_tube
Zinc-binding
Superfamily
(Tail tube
protein
(gpM))
Cluster –
155808
Cluster409
7488
Proteobacte
ria
COG4518
All DNASuperfamily binding
Cluster395
2333
Gammaprot
eobacteria
(Mu-like
prophage
FluMu
protein
gp36)
DUF1834 family Cluster –
155803
PTS_IIA family
Tail_tube family
FluMu_gp41fam
ily
(Mu-like
363
P44238
No result
No result
No result
Phage_Mu_Gp4
5 family
prophage
FluMu
protein
gp41)
Cluster –
155809
Phage_Mu_ Transmembr
Gp45
ane
Superfamily
(Bacterioph
age
(Baseplate
assembly)
protein)
Cluster –
GP46
EC 2.7.-.-:
155812
Superfamily Transferases
(Protein
Transferring
gp46)
PhosphorusContaining
Groups
Cluster –
Baseplate_J All lipid155814
Superfamily binding
proteins
(Protein
gp47)
364
P44239
No result
No result
No result
GP46 family
365
P44240
No result
No result
No result
Baseplate_J
family
366
P44241
No result
No result
No result
DUF2313 family Cluster –
155819
(Mu-like
prophage
FluMu
protein
DUF2313
All lipidSuperfamily binding
proteins
Cluster409
8758
Mu-like
prophage
protein
gp45
Cluster410
7343
Phage
GP46
Cluster396
1356
Baseplate
assembly
protein Jlike,
predicted
Cluster396
7784
Gammaprot
eobacteria
367
368
369
370
P44242
P71390
P44243
P44246
No result
No result
Pectin lyase-like
superfamily
No result
No result
No result
eRF1
methyltransf
erase
catalytic
subunit
MTQ2 -like
domain
family
S-adenosyl-Lmethioninedependent
methyltransferas
es superfamily
No result
tRNA 5methylamin
omethyl-2thiouridine like domain
family
FAD/NAD(P)binding domain
superfamily
FAD NAD
binding
oxidoreducta
ses family
No result
Mu-like_Com
family
gp48)
Cluster –
100889
(Mu-like
prophage
FluMu
defective
tail fiber
protein)
Cluster –
133104
(Cryptic
Mu-phage
protein
Com)
MethyltransfD12 Cluster –
family
133481
No result
Cluster –
150558
Cluster405
2667
Pectin
lyase
fold/virulen
ce factor
MuNo Result
like_Com
Superfamily
Cluster475
5074
Bacteria
No result
Cluster363
8648
D12 class
N6
adeninespecific
DNA
methyltrans
ferase
Cluster414
6363
TRNA U34 5methylamin
omethyl-2thiouridine
(Hypothetic
al protein )
Methyltransf_30
family
EC 4.2.-.-:
Lyases CarbonOxygen
Lyases
Methyltrans
f_30
Superfamily
(FAD
/Strep_67k
dependent
Da_ant
oxidoreduct Superfamily
ase)
EC 3.1.-.-:
Hydrolases Acting on
Ester Bonds
EC 1.3.-.-:
Oxidoreduct
ases - Acting
on the CHCH group of
donors
371
372
373
374
Same as
370
P44247
P45244
P44251
-
-
-
-
-
-
-
No result
FAD/NADlinked
reductases, Nterminal and
central domains
FAD NAD
binding
oxidoreducta
ses family
DAO family
(FAD dependent
oxidoreductase)
Cluster –
150558
No result
EC 2.4.-.-:
Transferases
Glycosyltran
sferases
FMN-dependent
nitroreductaselike superfamily
NADPH
nitroreductas
e family
Nitroreductase
family
Oxygeninsensitive
NAD(P)H
nitroreducta
se -like
domain
family
No result
(FAD
dependent
oxidoreduct
ase)
Cluster –
143710
(Nitroreduc
tase family
protein)
alpha/betaHydrolases
superfamily
No result
DUF452 family
Cluster –
135245
Nitro_FMN EC 2.3.-.-:
_reductase
Transferases
Superfamily Acyltransfer
ases
DUF452
All lipidSuperfamily binding
proteins
(Hypothetic
al protein)
375
P44252
No result
No result
Lipoproteinreleasing
system
MacB_PCDfami
ly
Cluster –
141137
MacB_PCD TC 3.A.
Superfamily Primary
/FtsX
Active
biosynthesi
s protein
MnmC, Cterminal
Cluster414
6363
TRNA U34 5methylamin
omethyl-2thiouridine
biosynthesi
s protein
MnmC, Cterminal
Cluster415
7972
Nitroreduct
ase-like
Cluster398
0451
Protein of
unknown
function
DUF452
Cluster416
3048
Lipoprotein
transmembra
ne protein
lole family
376
P45252
Superkiller
protein 3 like domain
family
377
P45253
Release
N5-glutamine
factor
methyltransferas
glutamine
e, HemK family
methyltransf
erase -like
domain
family
HEMK
methyltransf
erase family
member
378
P44253
No result
No result
379
P44254
No result
Tetratricopeptide Family not
repeat (TPR)
named
family
No result
No result
No result
(Lipoprotei Superfamily Transporters
n releasing
- P-P-bondsystem
hydrolysistransmembr
driven
ane protein
transporters
LOLE)
Transglut_core2f Cluster –
Transglut_c EC 2.4.-.-:
amily
141615
ore2
Transferases
Superfamily (TPR
Glycosyltran
domain
sferases
protein)
Methyltransf_31 Cluster –
AdoMet_M EC 2.1.-.-:
family
145158
Tases
Transferases
Superfamily (Ribosomal
Transferring
RNA small
One-Carbon
subunit
Groups
methyltrans
ferase C
(EC
2.1.1.52)
RDD family
Cluster –
RDD
Transmembr
123426
Superfamily ane
No result
(Putative
integral
membrane
protein)
Cluster –
83894
(Protein
No result
All DNAbinding
releasing
system,
transmembr
ane protein,
LolC/E
family
Cluster388
0357
Gammaprot
eo bacteria
Cluster415
1922
Modificatio
n
methylase
HemK
Cluster365
1740
RDD
Cluster406
0045
Haemophil
us
HI1562)
380
381
382
383
P44255
P44256
P44260
Q4QKT3
No result
DNA
polymerase
IV -like
domain
family
No result
No result
No result
Lesion bypass
DNA
polymerase (Yfamily), little
finger domain
superfamily
No result
No result
No result
No result
DUF462 family
UPF0242 family
Cluster –
156356
(Putative
transportin
g ATPase)
Cluster –
14066
DUF462
CopperSuperfamily binding
No result
Nickelbinding
(Serine
Threonine
Protein
Phosphatas
e 5,
Tetratricop
eptide
repeat)
Cluster479
1876
Protein of
unknown
function
DUF462
No result
(no result )
No result
No result
DUF935family
Band_7_1family
Cluster –
155792
(Mu-like
prophage
FluMu
protein
gp29)
Cluster –
155914
(Replicatio
n protein)
DUF935
MetalSuperfamily binding
Cluster388
4590
Protein of
unknown
function
DUF935
No result
Cluster383
7166
Replication
endonuclea
se,
rRNAbinding
Proteins
384
385
P44262
386
Same as
384
P45267
387
P44267
388
389
P44268
P44269
4hydroxyphe
nylpyruvate
dioxygenase
-like domain
½ family
-
Glyoxalase/Bleo No result
mycin resistance
protein/Dihydrox
ybiphenyl
dioxygenase
superfamily
-
Adenylate
CYTH-like
cyclase -like phosphatases
domain
superfamily
family
No result
No result
No result
No result
UPF0276
protein
MCA3108 like domain
family
Xylose
isomerase-like
superfamily
No result
No result
No result
YecMfamily
Cluster –
156340
Glo_EDI_B No result
RP_like
Superfamily
(Protein
yecM)
-
-
CYTH family
Cluster –
(CyaB-like
148636
adenlyl cyclases)
(ygiF
protein)
DUF2063 family Cluster –
156353
DUF692 family
-
-
CYTHAll DNAlike_Pase
binding
Superfamily
DUF2063
Zinc-binding
Superfamily
(Hypothetic
al protein)
Cluster –
DUF692
Manganese133486
Superfamily binding
(Hypothetic
al protein)
No result
Cytomega_UL2
0A family
Cluster –
148891
(Putative
COG3767
Iron-binding
Superfamily
probable,
phage
Cluster401
1886
Protein of
unknown
function
DUF991
Cluster269
1408
CAMP
biosyntheti
c process
Cluster345
1596
Pasteurellal
es
Cluster412
93114
Protein of
unknown
function
DUF692
(Xylose
isomeraselike)
Cluster410
3162
Complete
proteome
390
391
P44270
P44272
No result
No result
Aquaporin-like
family
No result
No result
No result
DoxX family
SH3_3 family
periplasmic
protein)
Cluster –
149079
DoxX
Transmembr
Superfamily ane
Cluster391
9138
DoxX
(Putative
integral
membrane
protein)
Cluster –
130233
SH3_3
Transmembr
Superfamily ane
Cluster408
9004
Uncharacte
rised
conserved
protein
UCP00615
8, SH3,
YgiM
Cluster385
9326
Integral to
membrane
(SH3
domain
protein)
392
393
P44275
P44277
No result
LRP2binding
protein -like
domain ½
family
No result
HCP-like
superfamily
No result
SEL-1-like
protein
family
No result
Sel1 family
Cluster –
120247
(Putative
cytoplasmi
c
membrane
protein
CbiL
precursor)
Cluster –
139872
(Sel-1-like
protein)
No result
Transmembr
ane
Sel1
All lipidSuperfamily binding
proteins
Cluster421
5175
Keyword
9172
(Serine
394
395
396
397
P44278
P71394
P45279
P45280
No result
No result
No result
YwiC family
Cluster –
156361
(Ywic
protein)
Cluster –
141938
RutC family YjgF-like
protein yjgF superfamily
-like domain
famiy
Translation
initiation
inhibitor
family
Ribonuc_L-PSP
family
No result
No result
Phosphate
transporter
family
(PHO4 family )
Cluster –
133501
SNARE_assoc
family
Cluster –
142554
No result
Gam-like family
No result
Inner
membrane
protein dedarelated
family
(Translatio
n initiation
inhibitor)
YwiC
Transmembr
Superfamily ane
YjgF_YER
057c_UK11
4_family
Superfamily
EC 2.5.-.-:
Transferases
Transferring
Alkyl or
Aryl Groups,
Other than
Methyl
Groups
DUF1043
Transmembr
Superfamily ane
(YhcB
protein)
(DedAfamily
SNARE_ass Transmembr
oc
ane
Superfamily
Threonine
Protein
Phosphatas
e 5,
Tetratricop
eptide
repeat)
Cluster411
8246
Bacteria
Cluster405
4994
Keyword
10030
(Endoribon
uclease LPSP/choris
mate
mutaselike)
Cluster410
7460
Protein of
unknown
function
DUF1043
Cluster397
1317
SNARE
associated
Golgi
398
P44279
No result
No result
No result
CLPTM1family
(Cleft lip and
palate
transmembrane
protein 1 )
Aspartate
AA family
kinase family (Amino acid
kinase family)
399
Q57525
Aspartokina
se -like
domain
family
Carbamate
kinase-like
superfamily
400
P44280
No result
P-loop
containing
nucleoside
triphosphate
hydrolases
superfamily
No result
Ribokinase-like
superfamily
Inner
membrane
protein yeihrelated
family
Cons_hypoth698
family
No result
EcoR124_C
family
401
402
P45290
P44281
No result
No result
No result
DUF463 family
integral
membrane
protein)
Cluster –
113288
(DNA
helicase)
Cluster –
146114
protein
DUF2726
EC 3.1.-.-:
Superfamily Hydrolases Acting on
Ester Bonds
AAK
Superfamily
/ACT
(Aspartokin Superfamily
ase (EC
2.7.2.4)
(Aspartate
kinase))
Cluster –
DUF463
156298
Superfamily
EC 2.4.-.-:
Transferases
Glycosyltran
sferases
Cluster385
8451
Aspartate
kinase
activity
Zinc-binding
Cluster415
3076
Protein of
unknown
function
DUF463,
YcjX-like
protein
Cluster416
5087
Uncharacte
rised
protein
family
UPF0324
Cluster414
9146
(Putative
ATPase)
Cluster –
156575
Cons_hypot Transmembr
h698
ane
Superfamily
(Membrane
protein
Yeih)
Cluster –
133000
No result
Cluster398
7398
Alphaprote
obacteria
No result
(Class III
chitinase)
403
404
405
406
407
P44282
No result
P45298
P45300
P52606
Chemotaxis
protein
CheA -like
domain
family
Histidinecontaining
phosphotransfer
domain, HPT
domain
superfamily
No result
No result
Ribosomal
Tetrapyrrole
RNA small methylase family
subunit
methyltransf
erase I -like
domain
family
Sadenosylmet
hioninedependent
methytransfe
rase
subfamily
TP_methylase
family
UPF0102
protein
MCA0184 like domain
family
Restriction
endonucleaselike superfamily
No result
UPF0102 family
Glucose-6-
mono-SIS
Cluster –
101158
(Sensor
histidine
kinaserelated
protein)
Cluster –
144435
HPT
Zinc-binding
Superfamily
TP_methyla
se
Superfamily
(Tetrapyrro
le
methylase
family
protein)
Sedoheptulos SIS_2 family
Cluster –
155972
(Endonucle
ase (EC
3.1.-.-))
Cluster –
EC 2.7.-.-:
Transferases
Transferring
PhosphorusContaining
Groups
UPF0102
All lipidSuperfamily binding
proteins
SIS
Manganese-
Restriction
endonuclea
se, type I,
EcoRI, R
subunit
Cluster439
7702
Fungi
Cluster416
2143
Uncharacte
rised
protein
family
UPF0011
(Cobaltprecorrin-4
Transmethy
lase;
Domain 1)
Cluster412
4296
(Restriction
endonuclea
se-like)
Cluster388
408
409
410
P45301
Q57544
P45305
phosphate
isomerase like domain
½ family
domain family
No result
No result
e 7phosphate
isomerase /
dnaa
initiatorassociating
factor for
replication
initiation
family
No result
(Sugar
ISomerase)
147050
Superfamily binding
(Sugar
(Phosphohe ISomerase)
ptose
isomerase
(EC 5.-.-.-))
7230
Interconver
ting aldoses
and
ketoses,
and related
compounds
BON family
Cluster –
84123
BON
All lipidSuperfamily binding
proteins
Cluster413
8967
Transportassociated
Lactamase_ Iron-binding
B
Superfamily
Cluster417
0543
Betalactamaselike
Hydroxyacy
lglutathione
hydrolase like domain
family
Metallohydrolase/oxidor
eductase
superfamily
Beta
lactamase
domain
family
Lactamase_Bfa
mily
Deoxyribon
uclease
TatD -like
domain
family
TatD Mgdependent
DNase-like
family
TATD
family
deoxyribonu
clease
TatD_DNasefam
ily
(Homolog
of
osmotically
induced
OSMY
protein of
E.coli)
Cluster –
142344
(Metallobetalactamase
superfamily
protein)
Cluster –
metallo149137
dependent_
hydrolases
(Deoxyribo Superfamily
nuclease
EC 3.1.-.-:
Hydrolases Acting on
Ester Bonds
Cluster395
7754
Deoxyribon
uclease,
TatD Mg-
411
412
413
P44283
P44284
P44285
Sonic
hedgehog
protein -like
domain ½
family
Sonic
hedgehog
protein -like
domain ½
family
ErfK/YbiS/
YcfS/YnhG
family
protein -like
No result
No result
Peptidase_M15_
2family
tatD)
Cluster –
147735
Peptidase_
No result
M15_3
Superfamily
(Putative
exported
protein)
Hedgehog/DDpeptidase
superfamily
No result
Peptidase_M15_
2family
Cluster –
147735
(Putative
exported
protein)
L,Dtranspeptidase
catalytic
domain-like
No result
YkuD family
Cluster –
130284
(Peptidogly
Peptidase_
EC 3.1.-.-:
M15_3
Hydrolases Superfamily Acting on
Ester Bonds
YkuD
Transmembr
Superfamily ane
dependent
Cluster399
1562
Protein of
unknown
function
DUF882,
bacterial
(Hedgehog/
DDpeptidase,
zincbinding
motif)
Cluster399
1562
Protein of
unknown
function
DUF882,
bacterial
(Hedgehog/
DDpeptidase,
zincbinding
motif)
Cluster281
7677
YkuD
domain
414
P44287
domain
family
No result
family
No result
Uncharacteri
zed family
PqiA family
can-binding
protein)
Cluster –
PqiA
Transmembr
133477
Superfamily ane
(Paraquatinducible
protein A)
415
416
417
418
P44288
P44289
P44290
P44292
No result
No result
No result
Putative
uncharacteri
No result
Uncharacteri
zed family
MCE family
Cluster –
130652
(Paraquatinducible
protein B)
Cluster –
151054
MFS general
substrate
transporter
superfamily
PHydroxybenz
oic acid
efflux pump
subunitrelated
family
FUSC-like inner
membrane
protein yccS
family
No result
No result
DUF2057 family Cluster –
126294
No result
No result
DUF218 family
(Putative
efflux
(PET)
family
transporter)
(Exopolyga
lacturonase
precursor)
Cluster –
115958
MCE
Transmembr
Superfamily ane
FUSC-like
Superfamily
/ FUSC_2
Superfamily
Cluster386
1391
Paraquatinducible
protein A
(Multihaem
cytochrome
)
Cluster397
3964
Mammalia
n cell entry
related
TC 9.B.
Incompletely
Characterize
d Transport
Systems Putative
uncharacteri
zed transport
proteins
DUF2057
All lipidSuperfamily binding
proteins
Cluster415
8714
Protein of
unknown
function
DUF893,
YccS/YhfK
YdcF-like
Transmembr
Superfamily ane
Cluster397
0067
Cluster346
4715
Pasteurellal
es
zed protein like domain
family
419
P45332
No result
(Protein
ydcF)
No result
No result
YjgP_YjgQ
family
Cluster –
152692
(YjgP/Yjg
Q protein)
420
421
422
P45333
P44293
P44294
No result
Protein
ygiW -like
domain
family
No result
No result
Hypothetical
protein YgiW
family
No result
No result
YjgP_YjgQ
family
BOF family
Cluster –
152692
(YjgP/
YjgQ
protein)
Cluster –
156370
(Protein
ygiW
precursor)
No result
No result
HgmA Family
No result
Protein of
unknown
function
DUF218
COG0795
TC 2.A.
Cluster427
Superfamily Electrochemi 1706
cal Potential- Predicted
driven
permease
transporters - YjgP/YjgQ
Porters
(uniporters,
symporters,
antiporters)
COG0795
Transmembr Cluster427
Superfamily ane
1706
Predicted
permease
YjgP/YjgQ
BOF
TC 3.A.5
Superfamily Type II
(general)
secretory
pathway
(IISP) family
No result
No result
Cluster410
2476
Hypothetic
al protein
YgiW
(OB fold
(Dihydrolip
oamide
Acetyltrans
ferase,
E2P))
Cluster477
3061
(homogentisate
1,2-dioxygenase)
423
424
P44296
Q57066
Erythrocyte
membrane
protein 1,
PfEMP1 like domain
Adhesin YadA,
collagen-binding
domain family
Transposase Homeodomain-like domain like superfamily
family
TSBP protein YadA_head
(fragment)
family
Subfamily
(Head domain of
trimeric
autotransporter
adhesin)
No result
HTH_28family
425
P44297
No result
No result
No result
UPF0231 family
426
O05087
No result
No result
Manganese
transporter
family
Nramp family
Cluster –
108737
(MapA
protein
(Hsf))
Cluster –
142986
(Putative
transposase
)
Cluster –
156244
No result
EC 3.4.-.-:
Hydrolases Acting on
peptide
bonds
(Peptidases)
HTH_23
All lipidSuperfamily binding
proteins
UPF0231
TC 1.C.
Superfamily Channels/Po
res - Pore(Pasteurella
forming
haemolytic
toxins
a putative
(proteins and
coproporph
peptides)
yrinogen
III oxidase)
Cluster –
MntH
TC 2.A.
149528
Superfamily Electrochemi
cal Potential(Mn2+ and
driven
Fe2+
transporters transporter
Porters
of the
(uniporters,
Homogenti
sate 1,2dioxygenas
e
Cluster295
602
Haemophil
us
influenzae
Cluster424
3269
Transposas
e IS3/IS911
Cluster404
1461
Uncharacte
rised
conserved
protein
UCP00628
7
Cluster299
9810
Natural
resistanceassociated
macrophag
e protein
427
428
429
P44298
P44299
P44300
Urea
Cyclophilin-like
amidolyase superfamily
-like domain
1 family
Urea
amidolyase
subfamily
Arginine
repressor like domain
family/
Cyclophilin-like
superfamily
No result
AHS1 family
No result
No result
E1-E2_ATPase
family
Allophanate
hydrolase/ur
ea
amidolyaserelated -like
domain
family
No result
AHS2 family
NRAMP
family)
Cluster –
140465
symporters,
antiporters)
AHS2
EC 3.1.-.-:
Superfamily Hydrolases Acting on
Ester Bonds
(AcetylCoA
carboxylase
)
Cluster –
DUR1
EC 4.1.-.-:
140465
Superfamily Lyases Carbon(AcetylCarbon
CoA
Lyases
carboxylase
)
Cluster –
122532
(ATP
synthase
subunit I)
No result
EC 3.1.-.-:
Hydrolases Acting on
Ester Bonds
Cluster416
7582
Allophanat
e hydrolase
subunit 2
Cluster410
0812
Conserved
hypothetica
l protein
CHP00370
Cluster407
7986
Bacteria