ENERGY & METABOLISM Properties/ Characteristics of Enzymes 1. Are organic catalysts which change the RATE of a chemical reaction 2. All are globular proteins Properties/ Characteristics of Enzymes 3. Some enzymes depend upon COENZYMES to catalyze the reaction (ex: NAD+, NADP, FAD) 4. Coenzymes are organic molecules (“B” vitamin derivatives) which assist a specific enzyme in a specific reaction Properties/ Characteristics of Enzymes 5. Are temperature sensitive-- they work most efficiently at an optimum temperature 6. Most are denatured at temperatures above 42o C Properties/ Characteristics of Enzymes 7. Are pH sensitivemost react between pH 6-8, except for gastric enzymes 8. Enzymes are specific to a given substrate Properties/ Characteristics of Enzymes 9. Possesses an ACTIVE SITE which reacts with a specific substrate 10. Able to catalyze reversible reactions-direction of these reactions depends upon substrate concentrations Properties/ Characteristics of Enzymes 11. Lower the activation energy of the reaction 12. Each has a given TURN-OVER number (ex: molecular activity of catalase is 5.6 x 106 molecules of H2O2 transformed/minute) Properties/ Characteristics of Enzymes 13. Some enzymes require COFACTORS metals essential to the enzymatic reaction (ex: catalase requires Fe2+ or Fe3+) 14. Are unaltered by the reaction they catalyze and thus are REUSABLE Figure 2-21 Enzyme Action Enzyme Sucrase In Action Section 2-4 Enzyme (hexokinase) Glucose Substrates Products ADP Glucose-6phosphate Products are released ATP Active site Enzyme-substrate complex Substrates are converted into products Substrates bind to enzyme Energy & Living Things Energy A. ENERGY: will cause matter to move or change Ex: mechanical, light, sound, heat, electrical, nuclear 1. Forms: 1) POTENTIAL (stored)/ ex: sugar cube, gasoline - Chemical energy 2) KINETIC (motion)/ ex: heat, light, falling water (position) Cont. Energy 2. Thermodynamics: energy conversion/ transformations 1) 1st Law: Energy is not created or destroyedonly changed from one form to another (converted) Ex: Food (chemical energy) Cell work (heat) 2) 2nd Law: Entropy/Disorder- energy is lost to maintain order and changing trophic levels Cont. Energy 3. Energy Flow in Ecosystems (Unidirectional) 1) Sun Inorganic Chemicals ---- Autotrophs---- Heterotrophs---- Heat HEAT (photosynthetic/ HEAT (cellular respiration) chemosynthetic) • Open System: Can exchange energy & matter with its surroundings (Earth) • Organisms are open systems absorb E (light E/chem E in form of organic molecules) & releases heat and metabolic waste products to surroundings 2) Energy in living systems is moved by a transfer of electrons from one atom to another Cont. Energy Flow in Ecosystems 3) Reactions that pass electrons are called OXIDATION-REDUCTION REACTIONS (Pass e- from one atom to another) • OXIDATION: removal of electrons (loss) e- or H2 • REDUCTION: addition of electrons (gain) e- or H2 OIL RIG Becomes oxidized (lose e-) Na + Cl Na+ + ClBecomes reduced (gain e-) Cont. Energy Flow in Ecosystems 4) In chemical reactions, oxidation and reduction occur simultaneously- if one molecule gains an electron (reduction), then a 2nd molecule loses the electron (oxidation) COUPLED REACTION Cont. Energy Flow in Ecosystems 5) How to determine if organic molecules are oxidized/reduced: • REDUCTION: # of C-H bonds increases • OXIDATION: # of C-H bonds decreases Ex: Respiration Becomes oxidized (loses) C6H12O6 + 6 O2 6 CO2 + 6 H2O + energy Becomes reduced (gains) Chemical Reactions B. CHEMICAL REACTIONS: absorb or release energy 1) Endergonic: needs or uses energy (energetically unfavorable reaction) Ex: photosynthesis, building proteins - Non-spontaneous rxn 2) Exergonic: gives off or releases energy (energetically favorable reaction) Ex: respiration, fermentation, burning - Spontaneous rxn Figure 2-19 Chemical Reactions Section 2-4 Chemical Reactions Endergonic Reaction Exergonic Reaction Energy-Absorbing Reaction Energy-Releasing Reaction Activation energy Products Activation energy Reactants Reactants Products Cont. Chemical Reactions 3) The energy that drives reactions is called free energy reactions releasing free energy can do cell work 4) Reactions start with reactants and form products Cont. Chemical Reactions 5) When fuel (glucose) is oxidized, enzyme reactions ensure that much of the free energy released is captured in the form of ATP rather than being released wastefully as heat to the environment 6) This is called a coupled reaction energy released from one reaction can be used to drive a reaction needing energy/ coupling reactions requires enzymes and cells conserve energy by coupling exergonic with endergonic reactions Cont. Chemical Reactions 7) Enzymes that catalyze cell endergonic reactions have two active sites: a. for reactant b. for ATP Figure 2-21 Enzyme Action Section 2-4 Enzyme (hexokinase) Glucose Substrates Products ADP Glucose-6phosphate Products are released ATP Active site Enzyme-substrate complex Substrates are converted into products Substrates bind to enzyme Coupled Reactions EXERGONIC GLUCOSE ENDERGONIC C *ENERGETICALLY FAVORABLE* - energy released - can create disorder ATP +P *PRODUCTS HAVE LESS ENERGY THAN REACTANTS* *ENERGETICALLY UNFAVORABLE* - energy needed - creates order ADP D CO2 + H2O *PRODUCTS CONTAIN MORE ENERGY THAN REACTANTS* Coupled Reactions C. Coupled reactions form activated/carrier energy molecule 1) Stores energy in “small packets” easy to exchange (ATP, NADH, NADPH), which are specialized to carry electrons and hydrogen atoms 2) Cells use activated energy carrier molecules like using money to pay for reactions Cont. Coupled Reactions 3) Most important and most abundant “universal” carrier is ATP • But NADPH works with enzymes that catalyze anabolic reactions supplying energy to build • While NADH works with enzymes that catalyze catabolic reactions moving energy from food to make ATP Cont. Coupled Reactions 4) COENZYMES: organic molecules which transfer electrons from enzyme to organic molecule then coenzyme carries electrons to another enzyme which catalyzes a different reaction 5) Hydrogen atoms and electrons are stripped from food and join: NAD NADH makes ATP Electron Carrier Molecules Metabolic Pathways D. METABOLIC PATHWAYS: chains, branching chains, or cycles 1) A set of enzymes working in a very precise orderly series of reactions that converts molecule A into molecule F Molecule Molecule Molecule Molecule Molecule Molecule A B C D E F Enzyme 1 Enzyme 2 Enzyme 3 Enzyme 4 Enzyme 5 Cont. Metabolic Pathways 2) BIOSYNTHETIC PATHWAYS (Anabolic) • Small building blocks Complex macromolecules Ex: photosynthesis, building proteins) • Endergonic rxn (“uphill” rxn) 3) DEGREDATIVE PATHWAYS (Catabolic) • Complex macromolecules Small building blocks Ex: respiration, fermentation, digestion) • Exergonic rxn (“downhill” rxn) Cont. Metabolic Pathways 4) VARIOUS PARTICIPANTS IN THESE PATHWAYS (Terms) a) b) c) d) Substrates: reactants Intermediates: produced in between End products: substances remaining at end Energy carriers: transfers energy (usually electrons/Hydrogen atoms) e) Enzymes: catalyze reactions f) Coenzymes/cofactors: help enzymes & carriers g) Transport proteins: in membrane/changing concentrations, influence direction of reaction Biochemical Pathway: Glycolysis Cont. Metabolic Pathways 5) Enzymes direct metabolism in cells: ↑ in enzyme concentration causes ↑ in reaction rate (*to a point, then rate will level) ↑ in substrate concentration causes ↑ in reaction rate Rxn Rate _____________________ ENZYME CONCENTRATION Rxn Rate Metabolism E. METABOLISM – Summary Dehydration synthesis *building, endergonic BIOSYNTHESIS ANABOLISM -P MACROMOLECULES Carbohydrate Glucose ADP ATP +P BUILDING BLOCKS Glucose CHO CATABOLISM DEGRADATION Hydrolysis *breakdown, exergonic *ex: cell respiration, fermentation Cont. Metabolism 1) Built into each living cell are controls over its enzyme activity 2) By coordinating its control mechanisms, the cell maintains, increases, or decreases concentrations of substances– controls can switch on or inhibit enzymes that are already made 3) ALLOSTERIC CONTROL: enzymes that have already been formed can be activated or inactivated when a signal substance combines at a binding site other than the active site and causes shape changes to the active site Cont. Metabolism 4) Biochemical pathways may be controlled by FEEDBACK INHIBITION: shutting down of a biochemical pathway due to allosteric enzyme sensitivity to product concentration 5) ALLOSTERIC ENZYME: enzyme that changes shape • has two binding sites 1) active site 2) allosteric site • signal molecule: binds to enzyme allosteric site and will activate or deactivate an enzyme Cont. Allosteric Enzyme ALLOSTERIC ENZYME SIGNAL ------------- ACTIVE (binds to substrate) MOLECULE ENZYME PRESENT ALLOSTERIC ENZYME SIGNAL ------------- MOLECULE ABSENT INACTIVE (cannot bind to ENZYME substrate) Allosteric Enzyme Cont. Metabolism 6) How a product (concentration) can inactivate an enzyme that normally makes the product in a metabolic pathway: Enzyme A Enzyme B Enzyme C 1 -------------- 2 -------------- 3 ------------- 4 • Enzyme A is the allosteric enzyme and has the allosteric site shape of the product (4), which blocks substance 1 from beginning the metabolic pathway • ↑ product concentration ====== Enzyme inactive (inhibition) • ↑ product 4 acts as the signal molecule Feedback Inhibition