DNA

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Chapter 12 and 13

Nucleic Acids, Protein Synthesis and Mutations

Central Dogma

DNA RNA Protein

1

Identifying the substance of Genes

• Influential Scientists:

• Griffith - Experimented with mice and bacteria that cause pneumonia and demonstrated TRANSFORMATION .

- Concluded that some FACTOR (gene) was responsible for the change.

• Avery - Followed up on Griffith’s experiment; wanted to know which molecule was important for transformation.

He then extracted the 4 macromolecules from these heat killed cells, all of which were considered to be possible candidates for the carriers of genetic information.

Treated each mixture with enzymes that destroyed the macromolecule and transformation still occurred.

He concluded that DNA is the source of genetic information.

Figure 12–2 Griffith’s

Section 12-1

Experiment

Heat-killed, disease-causing bacteria (smooth colonies)

Disease-causing bacteria (smooth colonies)

Harmless bacteria

Heat-killed, disease-

(rough colonies) causing bacteria

(smooth colonies)

Control

(no growth)

Harmless bacteria

(rough colonies)

Dies of pneumonia Lives Lives

Live, disease-causing bacteria (smooth colonies)

Dies of pneumonia

3

DNA

• Influential Scientists continued:

• Hershey and Chase -

Studied viruses – non-living particles that can infect living cells.

- Looked at bacteriophages – a virus that infects bacteria.

Supported the conclusion that genes were made of DNA.

DNA is the source of genetic information

Bacteriophage with phosphorus-32 in DNA

Phage infects bacterium

Radioactivity inside bacterium

Bacteriophage with sulfur-35 in protein coat

Phage infects bacterium

No radioactivity inside bacterium 4

Where is DNA found?

Inside the nucleus DNA is coiled into Chromosomes

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Components of DNA

• Nucleotide (monomer)

Deoxyribose sugar

Phosphate group

Nitrogen -containing base

• Adenine ( A )

• Guanine ( G )

• Cytosine ( C )

• Thymine ( T )

Purines

Pyrimidines

6

Components of DNA

• The structure or shape of DNA = Double Helix =

2 strands

Watson and Crick (1953) – tried to assemble the structure.

– Rosalind Franklin (1952) – used a technique known as x-ray diffraction to create a picture.

• The x shape indicated DNA is twisted (helix) around two strands.

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Components of DNA

• Complementary Base Pairing

– A↔T, G ↔C (Chargaff’s rule)

– Connected by covalent hydrogen bonds

DNA with

DNA Replication (duplication)

• Takes place in the nucleus (during the S phase)

• Result: 2 exact copies original DNA

DNA Polymerase

Helicase

Replication fork

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DNA Replication (duplication)

• 1. Helicase unzips the double helix by breaking the hydrogen bonds forming a replication fork.

• 2. DNA polymerase adds the complimentary base pairs to each separated strand.

– DNA Polymerase also “ proofreads ” each new strand.

Helicase DNA Polymerase

Replication fork

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DNA Replication, Accuracy & Repair

• Original: A-T-T-C-C-G

• Complement: TAAGGC

• Original: GCTAAG

• Complement:

• Original: CTACCA

• Complement:

• Original

– Strand A: GACCTA

– Strand B:

• DNA polymerase proofreads & repairs  1error/1Billion

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• Nucleotide

Ribose Sugar

Components of RNA

Phosphate Group

Nitrogen Base

• Adenine (A)

• Guanine (G)

• Cytosine (C)

• Uracil (U): not T

• Single Strand

• 3 Types:

Messenger RNA (mRNA)

Transfer RNA (tRNA)

Ribosomal RNA (rRNA)

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How to make RNA

Step 1 = Transcription : DNA  RNA

Takes place in the nucleus

1.

DNA unwinds.

2.

RNA Polymerase binds to DNA promoter site (begin gene)

Gene Begins

RNA Polymerase

3. Add complementary RNA nucleotides (U↔A)

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Transcription Continued

4. DNA termination sequence signals gene end

RNA Polymerase

5. RNA Polymerase releases DNA & RNA

RNA Strand

DNA Rewinds

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Transcription

DNA makes RNA

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1.

Carries instructions from

DNA to assemble amino acids into protein.

3 Types of RNA

3.

The site where proteins get assembled from mRNA.

2.

Carries the amino acids to the mRNA at the ribosome.

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How to make Protein =

Translation

• Involves the decoding of mRNA and assembling a protein

• Proteins = polymers = macromolecule

Monomer of protein = amino acid

Polypeptides = sequence of amino acids

• Genetic code is read 3 letters at a time.

Codon: every 3 base pairs in mRNA = an amino acid

• START Codon : starts translation- 1 codon only  AUG

• STOP Codon : stops translation- 3 codons  UAA, UAG, UGA

– Universal Codon -Amino Acid Code: p. 367

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mRNA Codon & Codon Chart

• AUG =

Methionine or start codon

• AAC = _________

Amino Acids

18

19

How to make Protein =

Translation

• tRNA

– In cytosol

Binds specific amino acid to mRNA

Anticodon :

• complement to mRNA codons

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Translation: mRNA

Protein

1.

mRNA leaves nucleus

2.

Ribosome attaches to mRNA start codon

3.

mRNA codon pairs with tRNA anticodon delivering amino acid.

4.

Peptide bond forms between amino acids

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Translation: mRNA

Protein

5.

mRNA stop codon signals end of translation. The ribosome releases the newly formed polypeptide.

6.

mRNA released & polypeptide complete

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Nucleus

Translation Diagram

Polypeptide Chain Peptide Bond

Amino Acid tRNA mRNA Codon

Ribosome

Anticodon

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Overview

DNA  RNA  Protein

Transcription

Translation

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Mutations

• Mutations – are heritable changes in genetic info.

• Occurs in only 2 types of cells

Sex-cell (germ-cell) mutations: gametes  affect offspring

Somatic mutations: body cells  affect individual

• 2 categories of mutations

Gene mutations  produce change in a single gene

Chromosomal mutations  produce change in a whole chromosome.

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Gene Mutations

A.K.A. Point Mutations (3 types)

1.

Substitution  1 nitrogen base gets substituted by another nitrogen base; this results in a new codon

Sickle Cell Anemia : substitute A for T

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Gene Mutations (con’t)

2.

Nucleotide deletions & insertions

– One base is inserted or removed from the sequence.

Causes Frame-shift mutations

Changes amino acid sequence

Deletion

Insertion

Deletion

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Chromosomal Mutations (5 types)

• Deletion: lose portion

• Duplication: gain extra portion

• Inversion: segment reverses

• Translocation: transfer segment to non-homologous

• Nondisjunction: gamete gets extra or less chromosome (Down Syndrome- Trisomy 21)

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Chromosome Mutations Diagrams

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Genetic Traits & Disorders

• Disorders due to nondisjunction

– Nondisjunction: gametes have 1 more or less chromosome (pairs don’t segregate)

– Monosomy: 45 chromosomes

• Turner’s syndrome: XO

– Trisomy: 47 chromosomes

• Down Syndrome: trisomy-21

• Kleinfelter’s syndrome: XXY

• Patau syndrome: trisomy-13

• Edward’s syndrome: trisomy-18

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