Homework: Finish Molecular Genetics Review Packet Part A Problem Set 12 #1 Do Now: 1. Look over your midterm exam. 2. Read the intro of the Molecular Genetics review packet and complete as much of Part A as you can Homework: Finish Molecular Genetics Review Packet Part A Problem Set 12 #1 Goals for Today: Interpret the results of historical experiments in molecular genetics Describe the structure of DNA Agenda: Review Midterm Exams Lecture: Historical Experiments with DNA Exam Scores: 100-90 2 89-80 6 79-70 6 69-60 2 59-0 0 A History of Experiments in Molecular Genetics Important questions of the 20th century: • What is the genetic material? • What is its structure? • How does it replicate? Griffith’s classic experiment Britain, 1928 Griffith’s conclusions • Live, nonpathogenic bacteria have taken up some chemical from the dead, pathogenic bacteria (transformation) • The offspring of the nonpathogenic bacteria inherited this material, becoming pathogenic Next question: What is the transforming material? What is the genetic material? Previous studies have revealed: • Genes are on chromosomes • Chromosomes are passed from one generation of cells to the next during cell division • Chromosomes are made of proteins and nucleic acids Therefore, the genetic material could be – Protein – DNA – RNA Whatever this material is, it must be able to – Store genetic info – Replicate Homework: Problem Set 12 #1, 2, 3 Do Now: (to think about, not necessarily write down) 1. What is the difference between replication and transcription? 2. Take out your notes… What was the major conclusion from Avery, McCarty, and McLeod’s experiment? Goals for Today: Interpret the results of historical experiments in molecular genetics Describe the structure of DNA Explain the major steps and enzymes involved in DNA replication Avery, McCarty, McLeod United States, 1944 What is the genetic material of bacteria? Conclusion ? Hershey & Chase 1952 What is the genetic material of viruses? Background: • Bacteriophage (“phage”) are viruses that infect bacteria & re-program the bacteria cell to make more viruses • Phage are made of – Protein shell -- DNA (or RNA) inside Hypothesis: • If protein is the genetic material, then bacteria infected with phage containing radioactive protein will become radioactive • If DNA is the genetic material, then bacteria infected with phage containing radioactive DNA will become radioactive Hershey & Chase 1952 Conclusion? Early 1950s: DNA is genetic material Evidence: • Bacteria: Avery, McCarty, MacLeod • Viruses: Hershey & Chase • Eukaryotes: – DNA (but not protein) content of cells doubles exactly during mitosis – DNA (but not protein) content of diploid cells is exactly double that of haploid cells Next question: What is the structure of DNA? We already know (1950) • DNA is a polymer of nucleotides • Each nucleotide has three parts: – Pentose sugar (deoxyribose) – Phosphate group – Nitrogenous base (4 types) Adenine Guanine Cytosine Thymine We don’t know: • What is the polymer structure? • How does DNA encode complex genetic info? • How does its structure enable replication? 4 Nitrogenous Bases PYRIMIDINES Sugar PURINES Sugar Sugar Sugar What was Watson & Crick’s evidence?? • Erwin Chargaff (1947) – Percentage of DNA bases (A, G, T, C) varies between species – But always %A = %T and %G = %C • Rosalind Franklin (1952) – Made an X-ray diffraction image of DNA that suggested a double helix The Breakthrough: Watson & Crick 1953 • DNA is a doublestranded polymer • A H-bonds w/ T • C H-bonds w/ G Biochemical reasons (width, H-bonding) • DNA molecules twist to form a DOUBLE HELIX Next question: How does DNA replicate? A quote from Watson & Crick’s Nobel Prizewinning paper: “It has not escaped our notice that the specific pairing we have postulated immediately suggests a possible copying mechanism for the genetic material.” (1953) 3 Hypotheses for DNA Replication Meselson-Stahl experiment • Parent DNA molecules are “heavy” • Newlysynthesized DNA molecules are “light” 1st round of replication 2nd round of replication Meselson-Stahl Conclusion: DNA replication is semi-conservative. DNA Structure Homework: Problem Set deadline extended until next Tuesday Tomorrow’s classwork (pre-lab and worksheet) also due Tuesday if you don’t finish in class Do Now: 1. What is the difference between DNA replication and making RNA (transcription)? 2. From your review packet, what are 3 major steps of DNA replication? 3. From yesterday’s notes, what are 3 enzymes important in starting the process of DNA replication? Goals for Today: Explain the major steps and enzymes involved in DNA replication Explain how scientists use knowledge of DNA structure and replication to study and manipulate DNA: ▪ How can we… ▪ Separate pieces of DNA based on their size ▪ Cut DNA at specific places ▪ Make many copies of a specific gene ▪ Find out the sequence of a DNA strand ▪ Attach different pieces of DNA (possibly from different species) together in order to genetically engineer an organism DNA Replication: Key enzymes in starting the process DNA Replication: Elongation DNA Replication: Leading vs. Lagging Strands Lagging Strand Elongation DNA Replication: Summary of Key Molecules • Helicase – Splits apart the template DNA strands (unwinds and unzips) • RNA Primer – short strand of RNA on daughter strand that DNA Pol uses to get started • DNA Polymerase – assembles nucleotides on daughter strand (complementary to template strand) • Leading strand – daughter strand that is synthesized continuously • Lagging strand – daughter strand that is synthesized discontinuously • Okazaki fragment – pieces of lagging strand that need to be connected • DNA Ligase – enzyme that connects fragments of DNA together DNA Sequencing Adel Fatima Kimberly Aaron Gel Electrophoresis Rishab Nehemie Jasmine Talia PCR Imad Klara Drishti Nicole Restriction Enzymes Christina Poppy Kira Djinnie 1. Research your technology in the textbook 2. Summarize on the handout. Use bullet points no longer than 2 lines each! The goal is to SUMMARIZE with the ESSENTIAL info! 3. Create a powerpoint or a Word doc (template on AP Bio blog) 4. Also be ready to DRAW a simple picture on the board