Cell and Molecular Biology Fifth Edition Chapter 4 Membrane structure and function Copyright © 2008 by John Wiley & Sons, Inc. 4.1 An overview of membrane functions 1. 2. 3. 4. 5. 6. 7. Compartmentalization Biochemical activities Providing a selectively permeable barrier Transport solutes Responding to external signals Intercellular interaction Energy transduction 4.2 A brief history of studies on plasma membrane structure 1. E. Oberton 1890s: more lipid soluble the compound, the more rapidly it would enter the root hair cells 2. E. Gorter and F. Grendel 1925: extracted the lipid from human red blood cells and measured the amount of surface area the lipid would cover when spread over the surface of water------lipid bilayer Surface tension is much lower than the pure lipid 3. Davson and Danielli 1930s : a protein film over an artificial lipid bilayer the lipid bilayer was also penetrated by protein-lined pores. Singer and Nicholson 1972: the fluid mosaic model The dynamic properties of membrane 4.3 The chemical composition of membrane 1. membrane lipids 2. membrane carbohydrates 3. membrane proteins 1. The structures of membrane lipids phosphoglycerides (磷酸甘油酯) sphingolipids (神經鞘酯類) cholesterol Sphingolipids (神經鞘酯類) Derivatives of sphingosine, an amino alcohol that contains a long hydrocarbon chain Sphingolipid (ceramide) consists of sphingosine and fatty acid. Cerebroside(腦苷酯類), ganglioside (神經 節苷酯)play a crucial function in cellular functions 1.muscular tumor and paralysis 2.fungus toxin (fumonisins) inhibits glycolipid synthesis and results in poor cell division and cell-cell interaction 3.cholera toxin, influ virus bind to GS 5.Tay-Sachs disease is a fatal inherited condition that results from the build-up of a particular lipid (a ganglioside) in cells of the brain. 6. Membrane lipid also provide the precursors for highly active chemical messengers that regulate cellular function. The nature and importance of the lipid bilayer Membranes are always continuous and are never seen to have a free edge due to flexibility of lipid bilayer. Influence the membrane protein activity determine the physical states of the membrane play a role in health and disease The dynamic properties of the plasma membrane Self assembly Membrane carbohydrates Short branched oligosaccharides fewer than 15 sugars per chain Mediate the interactions of cell with other cells as well as its nonliving environment 4.4 Membrane proteins May Contain from 12 to more than 50 different proteins Membrane sideness 1. Integral proteins 2. Peripheral proteins (noncovalent bond) 3. Lipid-anchord proteins (covalent bond with lipid molecule within the bilayer) Studying the structure and properties of integrated membrane proteins Ionic detergents Nonionic detergents Identify transmembrane domain Hydropathy plot Hydrophobicity is measured by the free energy required to transfer each segment of the polypeptide from a nonpolar solvent to an aqueous medium. Determining spatial relationships within a integral membrane protein by site-directed crosslinking Lactose permease Determine spatial relationships (distance) between amino acid in a membrane protein Study dynamic events that occurs as a protein carries out its function Introduce a chemical group which are sensitive to the distance that separate them. Mutate glycine to cystine NO· attach to SH group Electron paramagnetic resonance (EPR) spectroscopy Gerald Karp Cell and Molecular Biology Fifth Edition CHAPTER 4 Part 2 The Structure and Function of the Plasma Membrane Copyright © 2008 by John Wiley & Sons, Inc. 4.5 Membrane lipids and membrane fluidity 1. The importance of membrane fluidity 2. Maintaining membrane fluidity 3. The asymmetry of membrane lipids 4. Lipid rafts The importance of membrane fluidity 1. Supporting structure 2. Intercellular junction 3. Newly synthesized component easy to get in 4. Cell growth, movement, division, secretion, 5. Endocytosis Lipid rafts Microdomains: Nonsoluble in nonionic detergents, such as Triton X-100 Consisted cholesterol and sphingolipids Atomic force microscope: measure the height of various parts of the specimen at the molecular level. 4.6 The dynamic nature of the plasma membrane a. cell fusion b. fluorescence recovery after photobleaching (FRAP) Membrane domains and cell polarity The red blood cells: an example of plasma membrane structure 4.7 The movement of substances across cell membrane Diffusion of substances through membranes Partition coefficient: ratio of solubility in a nonpolar solvent Size, smaller uncharged, larger polar 1. The diffusion of water through membranes 2. The diffusion of ions through membranes Gerald Karp Cell and Molecular Biology Fifth Edition CHAPTER 4 Part 3 The Structure and Function of the Plasma Membrane Copyright © 2008 by John Wiley & Sons, Inc. The diffusion of water through membrane Through diffusion Pater Agre and colleagues at Johns Hopkins isolate and purify the membrane proteins responsible for the Rh antigen on the surface of RBC During this pursuit, they identified a protein They engineered frog oocytes to incoporated the newly discovered protein into their plasma membranes placed oocytes in a hypotonic medium, the oocytes swelled as predicated Aquaporins Aquaporins (a four subunits protein) Contains a central channel (hydrophobic aa) Highly specific for water molecules A billion water molecules through each channel every second H+ ions are not able to penetrate the open pores X-ray crystallographic studies the protein structure and the computer-based simulations Water channel movie Very near its narrowest point, the wall contains a pair of precisely positioned positive charged(N203, N68) residues that attract oxygen atom of each water molecule, prevent form the H-bond with neighboring water molecules. Prominent in cells such as kidney tubules or plant root hairs Vasopressin stimulates water retention in collecting ducts of kidney acts by AQP2 The diffusion of ions through membranes Nerve impulse Muscle contraction Secretion of calcium ions Exocytosis Regulation of cell volume opening the stomatal pore 1955, Alan Hodgkin, Bernard Katz, Andrew Huxley used giant squid nerve cell to discover the ion channel. 1991 Erwin Neher, Bert Sakmann developed “patch and clamp” technique to study the signal channel. 1998, R. MacKinnon et al. at Rockefeller University provided the first atomic-resolution image of an ion channel: Three dimensional structure of the bacterial KcsA channel and the selection of K+ ions. 2003 :Chemistry Nobel prize Four subunits, two are shown here P (pore) segment, the ions pass Carbonyl groups of aa residues project into the channel and interact with K+ ions selectively Each ring contains four O atoms, and each ring is just large enough so that 8 O atoms can coordinate a single K+ ions, replacing its normal water of hydration 3 A in diameter Closed conformation Eukaryotic voltage-gated K+ (Kv) channels have been isolated and the molecular anatomy of their proteins scrutinized a pore domain (S5, S6, P segment) a voltage-sensor domain (S 4 segment also is called Drosophila K+ Shaker ion channel) A single cell (human, nematode or plants) is likely to possess a variety of different K+ channels that open or close in response to different voltages. Facilitated diffusion Bacteriorhodopsin: a light-driven proton pump A seven transmembrane domians and a retinal group which serves as the lightabsorbing element (chromophore). 2. Protons move from the cytoplasm to the cell exterior through a central channel in the potein Co-transport coupling active transport to existing ion gradients