زیست شناسی مولکولی فصل اول: تنظیم بیان ژن در پروکاریوتها 1 2 3 4 5 6 7 8 9 10 SPECIALIZED GENES Operator = "on/off" switch for operon Regulator = makes repressors to turn off an entire operon Repressor = Binds to operator, turn off gene expression Inducer = Joins with an active repressor, inactivates it Co-repressor = Joins with inactive repressor, converts it to active 11 اپرون ها و ریگلون ها 12 13 14 THE OPERON 15 OPERON THEORY 16 INDUCIBLE OPERONS 17 MECHANISMS OF GENE REGULATION Pathway Terminology Ligand Regulator Catabolic Induction Substrate Negative (lac operon) Positive (ara operon) Anabolic Repression Product Negative (trp operon) Positive (amino acids in yeast) 18 NEGATIVE REGULATORS [BIND TO (URS)] OPERATORS OR UPSTREAM REPRESSION SEQUENCES Inducer – O Regulator (Repressor) Complex Corepressor O – Regulator (Aporepressor) Complex (Repressor) Inducible e.g. lactose operon Repressible e.g. trp operon 19 POSITIVE REGULATORS [BIND TO PROMOTERS, ENHANCERS OR UPSTREAM ACTIVATION SEQUENCES (UAS)] Inducer + O Regulator + Complex "Activator" Corepressor Regulator "Activator" O Complex Inducible e.g. cAMP Repressible e.g. nit-2 20 REPRESSIBLE OPERONS 21 Lac OPERON THEORY 22 Lac OPERON THEORY 23 Lac OPERON THEORY 24 INACTIVE REPRESSOR-LACTOSE PRESENT 25 LAC OPERON SUMMARY 26 Lac OPERON THEORY 27 Lac OPERON THEORY 28 -HOW THE CAMP-CRP DIMERBINDS TO THE ACTIVATION SITE TO STIMULATE ATTRACTION FOR THE RNA POLYMERASECRPCRP 29 trp OPERON THEORY 30 trp OPERON THEORY 31 trp OPERON THEORY 32 E. COLI TRP OPERON: ATTENUATOR UGG is the codon for tryptophan 33 ATTENUATION IN BACTERIA (COUPLED TRANSCRIPTION AND TRANSLATION) RNA polymerase DNA +H N 3 Protein Ribosome mRNA 34 E. COLI TRP OPERON: ATTENUATION توالي تنظيمي تضعيف كننده در اپرون تريپتوفان 35 36 37 Attenuation model in Trp starved cells. 38 Attenuation model in Trp non-starved cells Animation 39 ara OPERON THEORY 40 41 E. COLI ARA OPERON 42 E. COLI ARA OPERON: ARABINOSE PRESENT 43 E. COLI ARA OPERON: ARABINOSE ABSENT Interaction between dimers bound to I and O2 sites creates DNA loop and blocks transcription 44 Different from the Lac operon, two activators AraC and CAP work together to activate the araBAD operon expression 45