Statistical Rules of Thumb

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Statistical Rules of Thumb
Gerald van Belle
Departments of Biostatistics and
Environmental Health
University of Washington,
Seattle, WA.
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Outline
A. Statistical rule of thumb
B. Experimental or observational studies
C. Covariation
D. Sample size
E. Presentation of results
F. Recapitulation
Slides available on WEB at:
www.vanbelle.org
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A. Statistical rule of thumb-1
A statistical rule of thumb is defined as a
widely applicable guide to statistical
practice—with sound theoretical basis.
Characteristics include intuitive appeal,
elegance, and transparency.
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A. Statistical rule of thumb-2
1. Statistical rule as quick response
a. Typically committee meetings
b. Consultation sessions
c. Need to know the basics
d. May be preaching to the choir
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A. Statistical rule of thumb-3
2. What are the basics?
a. Definition of statistical rule of thumb
b. Characteristics of rule of thumb
c. Substantive areas are idiosyncratic. In my
case: environmental studies, epidemiology,
statistical consulting
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B. Randomized and
Observational Studies-1
Rule 1.1 Distinguish between observational
and randomized studies.
a. Hohum!
b. What’s so nice about randomized studies?
c. What’s nice about observational studies?
d. Gradation in observational studies.
e. Some references.
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B. Randomized and observational
studies-2
a. Hohum!?
* Epidemiology vs biostatistics
* Selection issues
* Missing data issues
* Fragility of causal models
Arm Waving
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B. Randomized and observational
studies-3
a. Hohum!
b. What’s so nice about randomized studies?
* Provides a probability model
* Rule 6.1 “Randomization puts systematic
sources of variability into the error term.”
(DeLury)
* Lack of randomization leads to arm waving
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B. Randomized and observational
studies-4
a. Hohum!
b. What’s so nice about randomized studies?
c. What’s nice about observational studies?
* Easier to carry out
* Majority of data; e.g. administrative data bases
* Ethical constraints on randomization
* Lots of data
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B. Randomized and observational
studies-5
a.
b.
c.
d.
Hohum!
What’s so nice about randomized studies?
What’s nice about observational studies?
Gradation in observational studies.
Registry/
Cohort
Case
Report
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B. Randomized and observational
studies-6
e. Some references.
Benson and Hartz (2000) NEJM
Concato, Shah and Horwitz (2000) NEJM
Copas and Li (1997) JRSS B
Copas and Shi (2000) BMJ
Hays (2001) Am. Scientist
(See May 2002 ROM on website)
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C. Statistical rules of thumb
for covariation-1
Rule 3.1: “Before choosing a measure of
covariation determine the source of the
data (sampling scheme), the nature of the
variables, and the symmetry status of the
measure.”
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C. Statistical rules of thumb
for covariation-2
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C. Statistical rules of thumb
for covariation-3
Rule 3.2: “Do not summarize regression
sampling schemes with correlations.”
Assume simple linear regression, Y on X
2
regression
2
regression
r
1− r
2
random
2
random
r
=
1− r
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2
x,regression
2
x,random
s
s
14
C. Statistical rules of thumb
for covariation-5
True r2
Ratio
s2(x)/s2(true)
0.25
0
0
0.10
0.03
0.20
0.06
0.30
0.10
1
4
0
0
0.10
0.31
0.20
0.50
0.30
0.63
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C. Statistical rules of thumb
for covariation-6
Rule 3: “Assess agreement by addressing
accuracy, scale differential, and
precision. Accuracy can be thought of as
the lack of bias.”
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C. Statistical rules of thumb
for covariation-7
Model: Y1 and Y2 measured on the same “objects”
E (Y1 − Y2 ) = ( µ1 − µ 2 ) + (σ 1 − σ 2 ) + 2(1 − ρ )σ 1σ 2
2
Total
Deviance
2
2
+
=
Bias
+
Scale
differential
Imprecision
Lin (1989)
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C. Statistical rules of thumb
for covariation-8
Model: Y1 and Y2 measured on the same “objects”
E (Y1 − Y2 ) 2 ( µ1 − µ 2 ) 2 (σ 1 − σ 2 ) 2
=
+
+ (1 − ρ )
2σ 1σ 2
2σ 1σ 2
2σ 1σ 2
Deviance
=
Bias
+
Scale
+ Imprecision
differential
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D. Sample size responsibilities-1
n=2
( z1−α / 2 + z1− β )
 µ1 − µ 2 


 σ 
2
Statistician
2
Investigator
Investigator
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D. Sample size responsibilities-2
n=
Type I error = 0.05
Type II error = 0.20
(Power = 0.80)
16
 µ1 − µ2 


 σ 
2
Topic for discussion:
Treatment effect+
Variability=Effect Size
Two sample
(default)
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D. Sample size responsibilities-3
Effect Size
 µ1 − µ2 

 = Effect Size
 σ 
4
Effect Size =
n
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E. Presentation of results-1
Rule 7.1: When text, when tables, when
graphs?
“Use sentence structure for displaying 2 to 5
numbers, tables for displaying more
numerical information, and graphs for
complex relationships.”
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E. Presentation of results-2
Rule 7.1: When text, when tables, when
graphs?
a. Illustration-version 1
“The blood type of the population of the
United States is approximately 40%, 11%,
4% and 45% A, B, AB, and O,
respectively.”
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E. Presentation of results-3
Rule 7.1: When text, when tables, when
graphs?
a. Illustration-version 2
“The blood type of the population of the
United States is approximately 40% A, 11%
B, 4% AB, and 45% O.”
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E. Presentation of results-4
Rule 7.1: When text, when tables, when graphs?
a. Illustration-version 3
“The blood type of the population of the United
States is approximately,
O 45%
A 40%
B 11%
AB 4%
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E. Presentation of results-5
Rule 7.2: Table Structure
“Arrange rows and columns in meaningful way,
Limit the number of significant digits,
Make the table as self-contained as possible,
Use white space and lines to organize rows and columns,
Do not stint on table headings”
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Rule 7.2: Table structure
Original table on right.
1. Different degrees of
precision, due to
different sources of data.
2. Ordering by alphabet;
Spanish version would
look different.
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Rule 7.2: Table structure
1. Reduced number of
digits,
2. Rows arranged by
frequency,
3. White space suggests
similar groups
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E. Presentation of results-6
Rule 7.2: Table Structure
Significant digits for frequencies
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Table 7.5 Reformatted
Number of
activities
Women
Age
70-74
Age
75-79
Age
75-79
Age
85+
%
1
7
27
65
%
1
10
28
61
%
2
12
32
54
%
3
19
38
39
0
1-2
3-4
5-7
Mean
4.8
4.5
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23
36
36
3
16
37
44
2
13
30
55
2
10
26
61
0
1-2
3-4
5-7
4.0
4.5
4.8
5.0
Mean
Men
4.2
4.0
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E. Presentation of results-7
Rule 7.3: Graph data
“When possible graph the data.”
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The following three
tables and figures are
from a great paper:
Gelman, A., Pasarica, C.
and Dohdia, R. (2002).
Let’s practice what we
preach: Turning tables
into graphs. The
American Statistician,
56: 121-130.
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E. Presentation of results-8
Rule 7.4: Pie Charts
“Never use a pie chart. Present a simple list of
percentages, or whatever constitutes the
divisions of the pie chart.”
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E. Presentation of results-9
Rule 7.5: Bar Charts
“Always think of alternatives to a bar graph.”
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E. Presentation of results-10
Rule 7.6: Stacked bar charts
“There are much more effective ways of
showing data structure than stacked bar
charts.”
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E. Presentation of results-11
Rule 7.7: Three-dimensional bar graphs
“Never use three-dimensional bar graphs.”
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E. Presentation of results-12
Rule 7.8: Longitudinal data
“In the case of longitudinal data identify both
cross-sectional and longitudinal patterns.”
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E. Presentation of results-13
Rule 7.9: High dimensional data
“Three key aspects of presenting high
dimensional data are: rendering, manipulation,
and linking. Rendering determines what is to
be plotted, manipulation determines the
structure of the relationships, and linking
determines what information will be shared
between plots or sections of the graph.”
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E. Presentation of results-14
1. Chew words carefully
2. Watch table manners
3. Avoid pies
4. Stay away from bars
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F. Summary and recapitulation
1. Concept of statistical rule of thumb
2. Observation studies are fragile
3. Covariation needs to be described correctly
4. Logic to presentation of results
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G. Resources
1. Gerald van Belle, (2002). Statistical Rules
of Thumb, John Wiley and Sons, New York,
NY.
2. WEB sites: evolving rapidly
4. Statistical books and journals: Audience
recommendations
4. My choices at http://www.vanbelle.org
5. General purpose books and journals on
science
6. Colleagues. Find a consultants’ consultant
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H. Acknowledgments
1. DeLury (University of Toronto)
2. Steve Millard, Jim Hughes, Michael Levin
3. Paul Crane
4. Biostatistics, statistics, and epidemiology
colleagues
5. Consultees who sharpened my skills
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